E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L011701
BDB011701
BDBM240886
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(=O)N[C@H]3C[C@@H](C(=O)NC4CCCCC4)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C4CCCCC4)C3)cc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C56H70BrN9O8
1077.135000
DUMCUFNHQURVRM-MUUCLWMVSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240886
Local ready
Direct docking supported
E3L011702
BDB011702
BDBM240887
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(=O)N[C@H]3C[C@@H](C(=O)NC(C)C)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C4CCCCC4)C3)cc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C53H66BrN9O8
1037.070000
ZVTMZUQOSGTDGQ-OSHGBQKNSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240887
Local ready
Direct docking supported
E3L011703
BDB011703
BDBM240888
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CCC(=O)N2C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc3c(OC)ccc4cc(Br)ccc34)c3ccccc32)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C54H56Br2N8O8
1104.898000
ALIUHKXJZCMAAV-YDSDICBNSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240888
Local ready
Direct docking supported
E3L011704
BDB011704
BDBM240889
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CCCCC(=O)N2C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc3c(OC)ccc4cc(Br)ccc34)c3ccccc32)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C56H60Br2N8O8
1132.952000
XEUPNOJSSNQTHX-DYGKRUFJSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240889
Local ready
Direct docking supported
E3L011705
BDB011705
BDBM240890
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(=O)N3C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc4nn(-c5ccccc5C#N)c5ccccc45)c4ccccc43)cc2)c2ccccc2N(Cc2nn(-c3ccccc3C#N)c3ccccc23)C1=O
C64H56N14O6
1117.244000
SQXNCAKESJTANY-UCUXQBEDSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240890
Local ready
Direct docking supported
E3L011706
BDB011706
BDBM240891
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)Cc2cccc(CC(=O)N3C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc4c(OC)ccc5cc(Br)ccc45)c4ccccc43)c2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C60H60Br2N8O8
1180.996000
IHWSERQBSJKYST-MVPWKQBXSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240891
Local ready
Direct docking supported
E3L011707
BDB011707
BDBM240892
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2cnc(C(=O)N3C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc4c(OC)ccc5cc(Br)ccc45)c4ccccc43)cn2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C56H54Br2N10O8
1154.918000
GXFYCRZLAIFTMD-XAGGQHATSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240892
Local ready
Direct docking supported
E3L011708
BDB011708
BDBM240893
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(=O)N3C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc4c(C)ccc5ccccc45)c4ccc(C#N)cc43)cc2)c2cc(C#N)ccc2N(Cc2c(C)ccc3ccccc23)C1=O
C60H56N10O6
1013.172000
ABEWHESMNXBBBX-FJWUGETPSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240893
Local ready
Direct docking supported
E3L011709
BDB011709
BDBM240894
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CC(=O)N2C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc3c(OC)ccc4cc(Br)ccc34)c3ccccc32)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C53H54Br2N8O8
1090.871000
USJKJTRCBBJPHQ-GCRRAVDUSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240894
Local ready
Direct docking supported
E3L011710
BDB011710
BDBM240895
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CCCCCC(=O)N2C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc3c(OC)ccc4cc(Br)ccc34)c3ccccc32)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C57H62Br2N8O8
1146.979000
UOOVZPYCEUOIRH-JXJQUFNJSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240895
Local ready
Direct docking supported
E3L011711
BDB011711
BDBM240896
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2cccc(C(=O)N3C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc4c(OC)ccc5cc(Br)ccc45)c4ccccc43)n2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C57H55Br2N9O8
1153.930000
BYEWOHNSGVZTKI-GQZZGPPCSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240896
Local ready
Direct docking supported
E3L011712
BDB011712
BDBM240897
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)CCCCCCC(=O)N2C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc3c(OC)ccc4cc(Br)ccc34)c3ccccc32)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C58H64Br2N8O8
1161.006000
BHKFQSLHSMCXAC-AQALWICOSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240897
Local ready
Direct docking supported
E3L011713
BDB011713
BDBM240898
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc3ccc(C(=O)N4C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc5c(OC)ccc6cc(Br)ccc56)c5ccccc54)cc3c2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C62H58Br2N8O8
1203.002000
DVCZULJQUBIBRA-HLGNEWOLSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240898
Local ready
Direct docking supported
E3L011714
BDB011714
BDBM240899
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(Oc3ccc(C(=O)N4C[C@H](NC(=O)[C@@H](C)NC)C(=O)N(Cc5c(OC)ccc6cc(Br)ccc56)c5ccccc54)cc3)cc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C64H60Br2N8O9
1245.039000
XGUNLKVECPOSEU-YSFKWEKFSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240899
Local ready
Direct docking supported
E3L011715
BDB011715
BDBM240900
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(=O)N3C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc4c(OC)ccc5ccccc45)c4ccccc43)cc2)c2ccccc2N(Cc2c(OC)ccc3ccccc23)C1=O
C58H58N8O8
995.150000
JHXQJXZMVVMYBN-AQALWICOSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240900
Local ready
Direct docking supported
E3L011716
BDB011716
BDBM240901
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(=O)N3C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc4c(OC)ccc5cc(Br)ccc45)c4ccccc43)c(C)c2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C59H58Br2N8O8
1166.969000
PJTRCKWNFSSWCE-CLBURSBNSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240901
Local ready
Direct docking supported
E3L011717
BDB011717
BDBM240902
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2cc(C)c(C(=O)N3C[C@H](NC(=O)[C@H](C)N)C(=O)N(Cc4c(OC)ccc5cc(Br)ccc45)c4ccccc43)cc2C)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C59H58Br2N8O8
1166.969000
WHHWXTAPRGBQGN-CLBURSBNSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240902
Local ready
Direct docking supported
E3L011718
BDB011718
BDBM240903
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2cccc(C(=O)N3C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc4c(OC)ccc5cc(Br)ccc45)c4ccccc43)c2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C58H56Br2N8O8
1152.942000
PQGPVQQEGIDVFM-MLLHAFNLSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240903
Local ready
Direct docking supported
E3L011719
BDB011719
BDBM240904
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2cncc(C(=O)N3C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc4c(OC)ccc5cc(Br)ccc45)c4ccccc43)c2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C57H55Br2N9O8
1153.930000
QFQACUKMMOURCC-GQZZGPPCSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240904
Local ready
Direct docking supported
E3L011720
BDB011720
BDBM240905
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C(=O)N3C[C@H](NC(=O)[C@H](C)NC)C(=O)N(Cc4c(OC)ccc5cc(Br)ccc45)c4ccc(C#N)cc43)cc2)c2cc(C#N)ccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C60H54Br2N10O8
1202.962000
HTOSWKJYDYFOEH-KUFAWANDSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM240905
Local ready
Direct docking supported