E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L002081
BDB002081
Dephosphonocalyculin A (17)
COC[C@@H](C(O)[C@H](O)C(=O)NCCC(C)c1nc(/C=C/CC2OC3(C[C@@H](O)[C@@H]2C)O[C@H]([C@H](C[C@H](O)C(C)[C@H](O)C(C)/C=C(C)/C(C)=C/C=C/C(C)=C/C#N)OC)[C@H](O)C3(C)C)co1)N(C)C
C50H80N4O12
929.206000
FRXOVDDVHJLWBQ-OQGDWUSYSA-N Q15257 Serine/threonine-protein phosphatase 2A activator
BindingDB, PubChem
BindingDB:BDBM40784; PubChem:CID52940021
Local ready
Direct docking supported
E3L002082
BDB002082
Calyculinamide A (18)
COC[C@@H](C(O)[C@H](O)C(=O)NCCC(C)c1nc(/C=C/CC2OC3(C[C@@H](O)[C@@H]2C)O[C@H]([C@H](C[C@H](O)C(C)[C@H](O)C(C)/C=C(C)/C(C)=C/C=C/C(C)=C/C(N)=O)OC)[C@H](OP(=O)(O)O)C3(C)C)co1)N(C)C
C50H83N4O16P
1027.200000
GTJWBKWRZBNEEQ-INISGQCASA-N Q15257 Serine/threonine-protein phosphatase 2A activator
BindingDB, PubChem
BindingDB:BDBM40785; PubChem:CID52940022
Local ready
Direct docking supported
E3L002083
BDB002083
Des-N-methylcalyculin A (20)
CN[C@@H](COC)C(O)[C@H](O)C(=O)NCCC(C)c1nc(/C=C/CC2OC3(C[C@@H](O)[C@@H]2C)O[C@H]([C@H](C[C@H](O)C(C)[C@H](O)C(C)/C=C(C)/C(C)=C/C=C/C(C)=C/C#N)OC)[C@H](OP(=O)(O)O)C3(C)C)co1
C49H79N4O15P
995.158000
DRJFFABFDXTDCD-IICAFRLSSA-N Q15257 Serine/threonine-protein phosphatase 2A activator
BindingDB, PubChem
BindingDB:BDBM40787; PubChem:CID52940023
Local ready
Direct docking supported
E3L002084
BDB002084
Calyculin C (24)
COC[C@@H](C(O)[C@H](O)C(=O)NC(C)CC(C)c1nc(/C=C/CC2OC3(C[C@@H](O)[C@@H]2C)O[C@H]([C@H](C[C@H](O)C(C)[C@H](O)C(C)/C=C(C)/C(C)=C/C=C/C(C)=C/C#N)OC)[C@H](OP(=O)(O)O)C3(C)C)co1)N(C)C
C51H83N4O15P
1023.212000
MDHVPFKPZGGNLB-ZECJXGQESA-N Q15257 Serine/threonine-protein phosphatase 2A activator
BindingDB, PubChem
BindingDB:BDBM40790; PubChem:CID52940024
Local ready
Direct docking supported
E3L002085
BDB002085
BDBM40913
COc1ccc2c(c1)CCc1c(C(=O)NCc3ccc(F)cc3)noc1-2
C20H17FN2O3
352.365000
YYUWGYKGKYKEOC-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM40913; PubChem:CID5308666
Local ready
Direct docking supported
E3L002086
BDB002086
2-Methyl-5-thiophen-2-ylthieno[2,3-d][1,3]oxazin-4-one
Cc1nc2scc(-c3cccs3)c2c(=O)o1
C11H7NO2S2
249.316000
DGPHFMOEGCZWOK-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM40930; PubChem:CID804822
Local ready
Direct docking supported
E3L002087
BDB002087
BDBM40956
N#Cc1nc(-c2ccc(OCc3ccc(Cl)cc3)cc2)oc1N1CCC(C(N)=O)CC1
C23H21ClN4O3
436.899000
FWNRLNIZKQWZFW-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM40956; PubChem:CID664100
Local ready
Direct docking supported
E3L002088
BDB002088
N-(2,5-dimethoxyphenyl)-1-phenylmethanesulfonamide
COc1ccc(OC)c(NS(=O)(=O)Cc2ccccc2)c1
C15H17NO4S
307.371000
BYOULEODPGLFKX-UHFFFAOYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM40981; PubChem:CID743624
Local ready
Direct docking supported
E3L002089
BDB002089
BDBM40990
Cc1cc(C)cc(OCC(=O)Nc2ccc(N3CCCC3)cc2)c1
C20H24N2O2
324.424000
RCLFLJSSFWROMF-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM40990; PubChem:CID960705
Local ready
Direct docking supported
E3L002090
BDB002090
2-(5-bromo-2-furyl)-4H-3,1-benzoxazin-4-one
O=c1oc(-c2ccc(Br)o2)nc2ccccc12
C12H6BrNO3
292.088000
KLVPWMXJWCYAKX-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM41004; PubChem:CID1254875
Local ready
Direct docking supported
E3L002091
BDB002091
2-benzyl-1,3(2H,4H)-isoquinolinedione
O=C1Cc2ccccc2C(=O)N1Cc1ccccc1
C16H13NO2
251.285000
WLKLQVQYVROPCI-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM41005; PubChem:CID272514
Local ready
Direct docking supported
E3L002092
BDB002092
BDBM41036
Cc1ccc(Cl)cc1NC1=CC(=NS(=O)(=O)c2cccs2)c2ccccc2C1=O
C21H15ClN2O3S2
442.949000
BGOWMRGDUSUEFJ-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM41036; PubChem:CID992599
Local ready
Direct docking supported
E3L002093
BDB002093
BDBM41038
Cc1ccccc1NC1=CC(=NS(=O)(=O)c2cccs2)c2ccccc2C1=O
C21H16N2O3S2
408.504000
DBVTXTMIOWGNNH-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM41038; PubChem:CID2398574
Local ready
Direct docking supported
E3L002094
BDB002094
BDBM41066
Cc1ccsc1C1Nc2ccc3ncccc3c2C2=C1C(=O)CCC2
C21H18N2OS
346.455000
QQMVXUYSDBXPIN-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM41066; PubChem:CID619419
Local ready
Direct docking supported
E3L002095
BDB002095
BDBM41067
CCOc1ccc2nc(NC3=NC(c4ccc(OC)cc4)CC(=O)N3)nc(C)c2c1
C22H23N5O3
405.458000
KQAQQNMXXWWOOB-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM41067; PubChem:CID3147411
Local ready
Direct docking supported
E3L002096
BDB002096
BDBM41387
Cn1cnnc1SCc1ccc(C(=O)n2ncc(C#N)c2N)cc1
C15H13N7OS
339.384000
OKDRKIFSPRWEIF-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM41387; PubChem:CID2084089
Local ready
Direct docking supported
E3L002097
BDB002097
1-(4-methoxybenzoyl)-1H-1,2,4-triazol-3-amine
COc1ccc(C(=O)n2cnc(N)n2)cc1
C10H10N4O2
218.216000
VEXFYFAQGTUUIQ-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM41388; PubChem:CID3235777
Local ready
Direct docking supported
E3L002098
BDB002098
BDBM41406
COc1ccc2c(c1)CCc1c(C(=O)Nc3c(C)n(C)n(-c4ccccc4)c3=O)noc1-2
C24H22N4O4
430.464000
WAEKOGFNYIJJNL-UHFFFAOYSA-N Q9HAU4, Q9HCE7 E3 ubiquitin-protein ligase SMURF2, E3 ubiquitin-protein ligase SMURF1
BindingDB, PubChem
BindingDB:BDBM41406; PubChem:CID3242723
Local ready
Direct docking supported
E3L002099
BDB002099
BDBM41443
CCOc1cc(N2CCOCC2)c(OCC)cc1NC(=O)COc1cccc2cccnc12
C25H29N3O5
451.523000
VZELEVCSLRBHEE-UHFFFAOYSA-N O15151, Q99728 BRCA1-associated RING domain protein 1, Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM41443; PubChem:CID2997882
Local ready
Direct docking supported
E3L002100
BDB002100
BDBM41508
O=C(COC(=O)C(Cc1ccccc1)NC(=O)c1ccco1)NC1CC1
C19H20N2O5
356.378000
HOBGVFQTDJGOTM-UHFFFAOYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM41508; PubChem:CID4098741
Local ready
Direct docking supported