E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L021101
BDB021101
BDBM511603
COc1cc(C(=O)NCCCCNC(=O)COc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)ccc1Nc1ncc2c(n1)N(C)c1ccccc1C(=O)N2C
C40H39N9O9
789.806000
VEVMVFJHHBEQSP-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511603
Local ready
Direct docking supported
E3L021102
BDB021102
BDBM511604
COc1cc(C(=O)NCCCOCCOCCOCCCNC(=O)COc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)ccc1Nc1ncc2c(n1)N(C)c1ccccc1C(=O)N2C
C46H51N9O12
921.965000
ISEZBLQKECWYJU-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511604
Local ready
Direct docking supported
E3L021103
BDB021103
BDBM511605
Cc1noc(C)c1-c1ccc(-c2nc3cnccn3c2NCC(=O)NCCCCNC(=O)COc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)cc1
C38H37N9O8
747.769000
LBBCBGBNFQQOSZ-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511605
Local ready
Direct docking supported
E3L021104
BDB021104
BDBM511606
Cc1noc(C)c1-c1ccc(-c2nc3cnccn3c2NCC(=O)NCCCOCCOCCOCCCNC(=O)COc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)cc1
C44H49N9O11
879.928000
SVAAFCIDSHIIPD-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511606
Local ready
Direct docking supported
E3L021105
BDB021105
BDBM511607
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCCNC(=O)c1ccc3c(c1)C(=O)N(C1CCC(=O)NC1=O)C3=O)c1nnc(C)n1-2
C39H39ClN8O6S
783.311000
SYJHORXMXBZSSH-XLTVJXRZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511607
Local ready
Direct docking supported
E3L021106
BDB021106
BDBM511608
COc1cc(C(=O)NCCCCNC(=O)COc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)ccc1Nc1ccc2c(n1)N(C1CCCC1)[C@H](C)C(=O)N2C
C41H46N8O9
794.866000
FXSJJVJXVNFIBU-WIZGVZBGSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511608
Local ready
Direct docking supported
E3L021107
BDB021107
BDBM511609
Cc1sc2c(c1C)C(c1ccc(C#N)cc1)=N[C@@H](CC(=O)NCCCCNC(=O)COc1cccc3c1C(=O)N(C1CCC(=O)NC1=O)C3=O)c1nnc(C)n1-2
C39H37N9O7S
775.848000
IPNHNGIFOOJHDF-QBHOUYDASA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511609
Local ready
Direct docking supported
E3L021108
BDB021108
BDBM511610
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCN1CCN(C(=O)CCCCCNC(=O)COc3cccc4c3C(=O)N(C3CCC(=O)NC3=O)C4=O)CC1)c1nnc(C)n1-2
C47H53ClN10O8S
953.523000
HMNJUXRTSGUSFM-CDRRMRQFSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511610
Local ready
Direct docking supported
E3L021109
BDB021109
BDBM511611
Cc1c(CC#N)sc2c1C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCNC(=O)COc1cccc3c1C(=O)N(C1CCC(=O)NC1=O)C3=O)c1nnc(C)n1-2
C39H36ClN9O7S
810.293000
KUZXNKUFLRZLHU-PMCHYTPCSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511611
Local ready
Direct docking supported
E3L021110
BDB021110
BDBM511612
Cc1cnc(Nc2ccc(N3CCN(C(=O)CCCNC(=O)COc4cccc5c4C(=O)N(C4CCC(=O)NC4=O)C5=O)CC3)cc2)nc1Nc1cccc(S(=O)(=O)NC(C)(C)C)c1
C44H50N10O9S
895.012000
SZAPQKUIYSVIAG-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511612
Local ready
Direct docking supported
E3L021111
BDB021111
BDBM511613
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCCCCOc1cccc3c1C(=O)N(C1CCC(=O)NC1=O)C3=O)c1nnc(C)n1-2
C40H42ClN7O6S
784.339000
QYTHDSMOGXMOPE-XLTVJXRZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511613
Local ready
Direct docking supported
E3L021112
BDB021112
BDBM511614
COC(=O)C[C@@H]1N=C(c2ccc(Cl)cc2)c2c(sc(C(=O)NCCCCNC(=O)COc3cccc4c3C(=O)N(C3CCC(=O)NC3=O)C4=O)c2C)-n2c(C)nnc21
C39H37ClN8O9S
829.292000
LPVPLMPEDJZWAQ-SKCDSABHSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511614
Local ready
Direct docking supported
E3L021113
BDB021113
dBET23
COC(=O)C[C@@H]1N=C(c2ccc(Cl)cc2)c2c(sc(C(=O)NCCCCCCCCNC(=O)COc3cccc4c3C(=O)N(C3CCC(=O)NC3=O)C4=O)c2C)-n2c(C)nnc21
C43H45ClN8O9S
885.400000
ZIHIUFZFPMILIG-XLTVJXRZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM511615; PubChem:CID124190790
Local ready
Direct docking supported
E3L021114
BDB021114
BDBM511616
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCOCCOCCNC(=O)COc1cccc3c1C(=O)N(C1CCC(=O)NC1=O)C3=O)c1nnc(C)n1-2
C40H41ClN8O9S
845.335000
CVNPPCKNNCCUNH-MBMZGMDYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511616
Local ready
Direct docking supported
E3L021115
BDB021115
BDBM511617
COC(=O)C[C@@H]1N=C(c2ccc(Cl)cc2)c2c(sc(C)c2C(=O)NCCCCNC(=O)COc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)-n2c(C)nnc21
C39H37ClN8O9S
829.292000
CTQCRJBAHKVGBK-SKCDSABHSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511617
Local ready
Direct docking supported
E3L021116
BDB021116
BDBM511618
COC(=O)C[C@@H]1N=C(c2ccc(Cl)cc2)c2c(sc(C)c2C(=O)NCCCCCCCCNC(=O)COc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)-n2c(C)nnc21
C43H45ClN8O9S
885.400000
KNHZIKBDHRXJHX-XLTVJXRZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511618
Local ready
Direct docking supported
E3L021117
BDB021117
BDBM511619
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCOCCOc1cccc3c1C(=O)N(C1CCC(=O)NC1=O)C3=O)c1nnc(C)n1-2
C36H34ClN7O7S
744.230000
QDFNBECATTWIIB-SKCDSABHSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511619
Local ready
Direct docking supported
E3L021118
BDB021118
BDBM511620
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCOc1cccc3c1C(=O)N(C1CCC(=O)NC1=O)C3=O)c1nnc(C)n1-2
C36H34ClN7O6S
728.231000
GMYRPILFZKTDJL-SKCDSABHSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511620
Local ready
Direct docking supported
E3L021119
BDB021119
BDBM511621
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCCOc1cccc3c1C(=O)N(C1CCC(=O)NC1=O)C3=O)c1nnc(C)n1-2
C38H38ClN7O6S
756.285000
IWIUHSRVMHYMOY-QBHOUYDASA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511621
Local ready
Direct docking supported
E3L021120
BDB021120
BDBM511622
Cc1c(C(=O)NCCCCNC(=O)COc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)sc2c1C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCN1CCN(C)CC1)c1nnc(C)n1-2
C46H52ClN11O8S
954.511000
BHWJDRNVPYLKBM-CYZZXXEPSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB
BindingDB:BDBM511622
Local ready
Direct docking supported