E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L021301
BDB021301
US11091495, Example 143
Cn1nncc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cc(C#N)nc12
C19H15FN8O
390.382000
BDIUGQUKSKTIGY-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM513782; PubChem:CID155788030
Local ready
Direct docking supported
E3L021302
BDB021302
US11091495, Example 144
Cn1nc(C2CC2)cc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cc(C#N)nc12
C23H20FN7O
429.459000
QMVWJEHSIZKLEM-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM513783; PubChem:CID155788098
Local ready
Direct docking supported
E3L021303
BDB021303
US11091495, Example 145
Cc1nc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cc(C#N)nc23)c(C)s1
C21H17FN6OS
420.473000
RMUQMIXHRVWFLW-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM513784; PubChem:CID155788171
Local ready
Direct docking supported
E3L021304
BDB021304
US11091495, Example 146
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3ccccn3)c2n1
C21H15FN6O
386.390000
PBCKVNVBAQVRBC-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM513785; PubChem:CID155788130
Local ready
Direct docking supported
E3L021305
BDB021305
BDBM513786
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3ccc(CO)nc3)c2n1
C22H17FN6O2
416.416000
RELJOVYVSLYYAF-UHFFFAOYSA-N O75530, Q09028 Polycomb protein EED, Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM513786; PubChem:CID139371653
Local ready
Direct docking supported
E3L021306
BDB021306
BDBM513787
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3cccnc3CO)c2n1
C22H17FN6O2
416.416000
GZNSVNWPLOOUOU-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM513787; PubChem:CID139371559
Local ready
Direct docking supported
E3L021307
BDB021307
BDBM513788
CN(C)Cc1c(F)cc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cc(C#N)nc23)cc1F
C25H21F3N6O
478.478000
ISXVDIQXEBGFIC-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM513788; PubChem:CID139370906
Local ready
Direct docking supported
E3L021308
BDB021308
US11091495, Example 150
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3ccc(CN4CC(O)C4)cc3)c2n1
C26H23FN6O2
470.508000
SNWGDJSKRNYDNU-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM513789; PubChem:CID155788145
Local ready
Direct docking supported
E3L021309
BDB021309
US11091495, Example 151
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3ccc(CN4CCC(O)C4)cc3)c2n1
C27H25FN6O2
484.535000
NZDQFKCTEQPZOT-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM513790; PubChem:CID155788162
Local ready
Direct docking supported
E3L021310
BDB021310
US11091495, Example 152
Cc1nc(CN(C)C)ccc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cc(C#N)nc12
C25H24FN7O
457.513000
KCWPHFCEOFZPQY-UHFFFAOYSA-N O75530, Q09028 Polycomb protein EED, Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM513791; PubChem:CID155788021
Local ready
Direct docking supported
E3L021311
BDB021311
BDBM513792
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3ccn(CC4CCCO4)n3)c2n1
C24H22FN7O2
459.485000
PIRZDXQMMZIWOI-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM513792; PubChem:CID155676947
Local ready
Direct docking supported
E3L021312
BDB021312
US11091495, Example 154
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3cnn(CC4CCOC4)c3)c2n1
C24H22FN7O2
459.485000
AVAZTTCDLJIOJM-UHFFFAOYSA-N O75530, Q09028 Polycomb protein EED, Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM513793; PubChem:CID155787988
Local ready
Direct docking supported
E3L021313
BDB021313
BDBM513794
Cc1cc(-c2cnc(NCc3c(F)ccc4c3C(O)CO4)n3cc(C#N)nc23)n(C)n1
C21H18FN7O2
419.420000
HFXKNOVSZHJOEP-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM513794; PubChem:CID150411702
Local ready
Direct docking supported
E3L021314
BDB021314
BDBM513795
Cn1cccc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cc(C#N)nc23)c1=O
C22H17FN6O2
416.416000
AMHPTWFBCSOPAZ-UHFFFAOYSA-N O75530, Q09028 Polycomb protein EED, Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM513795; PubChem:CID155676965
Local ready
Direct docking supported
E3L021315
BDB021315
US20240398811, Example 114
Cn1nc(C(=O)O)cc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cc(C#N)nc12
C21H16FN7O3
433.403000
AFEKNNXNWROLRP-UHFFFAOYSA-N O75530, Q09028 Polycomb protein EED, Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM513796; PubChem:CID155676964
Local ready
Direct docking supported
E3L021316
BDB021316
US11091495, Example 158
COCCOc1ccc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cc(C#N)nc23)cn1
C24H21FN6O3
460.469000
QVPNALZXLPFBHR-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM513797; PubChem:CID156050997
Local ready
Direct docking supported
E3L021317
BDB021317
US11091495, Example 159
CN1CCc2cc(-c3cnc(NCc4c(F)ccc5c4CCO5)n4cc(C#N)nc34)ccc2C1
C26H23FN6O
454.509000
BHPPGHQHTIQBCQ-UHFFFAOYSA-N O75530, Q09028 Polycomb protein EED, Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM513798; PubChem:CID155788086
Local ready
Direct docking supported
E3L021318
BDB021318
US11091495, Example 160
CN1CCCC1c1ccc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cc(C#N)nc23)cc1
C27H25FN6O
468.536000
YJXSMBXBANRCDK-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM513799; PubChem:CID155787978
Local ready
Direct docking supported
E3L021319
BDB021319
US11091495, Example 161
COCCOc1ccc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cc(C#N)nc23)cc1
C25H22FN5O3
459.481000
MZXOMPJHIVKHRJ-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM513800; PubChem:CID156050906
Local ready
Direct docking supported
E3L021320
BDB021320
US11091495, Example 162
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3ccc(C4CCCO4)cc3)c2n1
C26H22FN5O2
455.493000
ULCAYNNEZLTPSJ-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM513801; PubChem:CID155788134
Local ready
Direct docking supported