E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L022781
BDB022781
US11180484, Example 80
COCc1nn(Cc2cnc(N3CCCC3)nc2)cc1C(=O)NCc1cc(OC)ccc1-n1cnnn1
C24H28N10O3
504.555000
OLELYTACRIKUHK-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM528129; PubChem:CID139301873
Local ready
Direct docking supported
E3L022782
BDB022782
US11180484, Example 83
COc1ccc(-n2cnnn2)c(CNC(=O)c2cn(Cc3ccc(N4CCCC4)nc3)nc2C(F)(F)F)c1F
C24H23F4N9O2
545.501000
SHZUCTHKVWMOJI-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM528130; PubChem:CID139301859
Local ready
Direct docking supported
E3L022783
BDB022783
US11180484, Example 86
COCc1nn(Cc2cnc(N3CCC(F)(F)C3)nc2)cc1C(=O)NCc1c(-n2cnnn2)ccc(OC)c1F
C24H25F3N10O3
558.525000
CEOSELUUHJNGPA-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM528131; PubChem:CID139301811
Local ready
Direct docking supported
E3L022784
BDB022784
US11180484, Example 87
COCc1nn(Cc2ccc(N3CCC(F)(F)C3)nc2)cc1C(=O)NCc1c(-n2cnnn2)ccc(OC)c1F
C25H26F3N9O3
557.537000
HWYRMCCHOBIHJO-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM528132; PubChem:CID139301856
Local ready
Direct docking supported
E3L022785
BDB022785
US11180484, Example 88
COCc1nn(Cc2cnc(N3CCC(F)(F)C3)nc2)cc1C(=O)NCc1cc(OC)ccc1-n1cnnn1
C24H26F2N10O3
540.535000
GXMGYLDFFLDKJK-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM528133; PubChem:CID132190827
Local ready
Direct docking supported
E3L022786
BDB022786
US11192880, Example X-1
CNC(=O)COc1cc2cc(Nc3nc(N4C[C@@H](C)N[C@@H](C)C4)ncc3Cl)ccc2n(C)c1=O
C23H28ClN7O3
485.976000
NSSRTMPGNIDSTM-OKILXGFUSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM528565; PubChem:CID142606276
Local ready
Direct docking supported
E3L022787
BDB022787
US11192880, Example X-2
CNC(=O)COc1cc2cc(Nc3nc(N4C[C@@H](C)O[C@@H](C)C4)ncc3Cl)ccc2n(C)c1=O
C23H27ClN6O4
486.960000
KNJJXBVNLZTWPR-OKILXGFUSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM528567; PubChem:CID142606271
Local ready
Direct docking supported
E3L022788
BDB022788
US11192880, Example X-3
CNC(=O)COc1cc2cc(Nc3nc(N4CC5CCC(C4)C5(F)F)ncc3Cl)ccc2n(C)c1=O
C24H25ClF2N6O3
518.952000
CDOJZLUKSSVWMM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM528568; PubChem:CID142606270
Local ready
Direct docking supported
E3L022789
BDB022789
US11192880, Example Ia
CNC(=O)COc1cc2cc(Nc3nc(N4C[C@@H](C)C(F)(F)[C@@H](C)C4)ncc3Cl)ccc2n(C)c1=O
C24H27ClF2N6O3
520.968000
UTHNWHQCMSDFJE-OKILXGFUSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM528569; PubChem:CID142606275
Local ready
Direct docking supported
E3L022790
BDB022790
BDBM529371
C[C@]1(CCc2ccc3cc(Br)c(N)nc3c2)C[C@@H](n2ccc3c(N)ncnc32)[C@H](O)[C@@H]1O
C23H25BrN6O2
497.397000
TYWVDVASSSOQLE-XQQXVUDOSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM529371; PubChem:CID155623315
Local ready
Direct docking supported
E3L022791
BDB022791
BDBM529372
CC[C@]1(CCc2ccc3ccc(N)nc3n2)C[C@@H](n2ccc3c(N)ncnc32)[C@@H]2OC(C)(C)O[C@@H]21
C26H31N7O2
473.581000
RSZYMIYAQBVTGF-NYWXEVPUSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB
BindingDB:BDBM529372
Local ready
Direct docking supported
E3L022792
BDB022792
BDBM529373
Cc1ncnc2c1ccn2[C@@H]1C[C@](C)(CCc2cc(F)c3cc(Cl)c(N)nc3c2)[C@H]2OC(C)(C)O[C@@H]12
C27H29ClFN5O2
510.013000
BAEGBPBNFVFGDV-GGLGADRISA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB
BindingDB:BDBM529373
Local ready
Direct docking supported
E3L022793
BDB022793
BDBM529374
C[C@]1(CCc2cc(F)c3ccc(N)nc3c2)C[C@@H](n2ccc3c(N)ncc(F)c32)[C@H](O)[C@@H]1O
C24H25F2N5O2
453.493000
ZQKPPMWVYFYUQJ-VPJOFFEXSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM529374; PubChem:CID155164893
Local ready
Direct docking supported
E3L022794
BDB022794
BDBM529375
CC1(C)O[C@H]2[C@H](n3ccc4c(Cl)ncnc43)C[C@](C=O)(CCc3cc(F)c4cc(Cl)c(N)nc4c3)[C@H]2O1
C26H24Cl2FN5O3
544.414000
HBIPJSTZYCNZDD-FUSMBFRDSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB
BindingDB:BDBM529375
Local ready
Direct docking supported
E3L022795
BDB022795
BDBM529376
COC[C@]1(CCc2cc(F)c3cc(Cl)c(N)nc3c2)C[C@@H](n2ccc3c(N)ncnc32)[C@H](O)[C@@H]1O
C24H26ClFN6O3
500.962000
BKGRZYFOJABSFK-XUJKJYMVSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM529376; PubChem:CID155705467
Local ready
Direct docking supported
E3L022796
BDB022796
BDBM529377
Nc1ncnc2c1ccn2[C@H]1[C@H](O)[C@H](O)[C@]2([C@H](O)c3ccc(Cl)c(Cl)c3)C[C@H]12
C19H18Cl2N4O3
421.284000
NXMGAWHQVFJJAK-XGNHOHPRSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM529377; PubChem:CID163200161
Local ready
Direct docking supported
E3L022797
BDB022797
BDBM529378
Nc1ncnc2c1ccn2[C@H]1[C@H](O)[C@H](O)[C@]2([C@@H](O)c3ccc(Cl)c(Cl)c3)C[C@H]12
C19H18Cl2N4O3
421.284000
NXMGAWHQVFJJAK-MEYBDHEYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM529378; PubChem:CID163200162
Local ready
Direct docking supported
E3L022798
BDB022798
BDBM529379
Nc1nc2cc(OC[C@@]3(F)C[C@@H](n4ccc5c(N)ncnc54)[C@H](O)[C@@H]3O)ccc2cc1Br
C21H20BrFN6O3
503.332000
GUIQOTFUZWXBTM-JJDSTIRJSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM529379; PubChem:CID155164920
Local ready
Direct docking supported
E3L022799
BDB022799
BDBM529380
Cc1cc2ccc(OC[C@@]3(C)C[C@@H](n4ccc5c(N)ncnc54)[C@H](O)[C@@H]3O)cc2nc1N
C23H26N6O3
434.500000
OGXVNNAVHVPILN-GKAYAJSDSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM529380; PubChem:CID163200163
Local ready
Direct docking supported
E3L022800
BDB022800
BDBM529381
Nc1nc2cc(OC[C@H]3C[C@@H](n4ccc5c(N)ncnc54)[C@H](O)[C@@H]3O)ccc2cc1Br
C21H21BrN6O3
485.342000
SIHOACLVFNATOR-WAFHWIMBSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM529381; PubChem:CID126637403
Local ready
Direct docking supported