E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L023101
BDB023101
US11220524, Example 15-C
C[C@@](O)(c1ccc(Cl)c(F)c1)[C@H]1O[C@@H](n2cc(F)c3c(N)ncnc32)[C@H](O)[C@@H]1O
C18H17ClF2N4O4
426.807000
WZVHNCLDXMIBSL-IZOOLLGQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533497; PubChem:CID154029245
Local ready
Direct docking supported
E3L023102
BDB023102
US11220524, Example 21-C
C[C@@](O)(c1ccc(Cl)s1)[C@H]1O[C@@H](n2ccc3c(N)ncnc32)[C@H](O)[C@@H]1O
C16H17ClN4O4S
396.856000
BEWFVLYVAWLKQZ-SCYJSFNGSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533498; PubChem:CID154029246
Local ready
Direct docking supported
E3L023103
BDB023103
US11220509, Example 142
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3cccnn3)c2n1
C20H14FN7O
387.378000
YNRNVHJGNIKGPW-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM533500; PubChem:CID155676959
Local ready
Direct docking supported
E3L023104
BDB023104
US11220509, Example 140
O=C(O)c1cn2c(NCc3c(F)ccc4c3CCO4)ncc(C3CCNCC3)c2n1
C21H22FN5O3
411.437000
AQEHGQLBCAFNCH-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM533517; PubChem:CID166595741
Local ready
Direct docking supported
E3L023105
BDB023105
BDBM533530
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3ccn(CC4CCCO4)n3)c2n1
C24H22FN7O2
459.485000
PIRZDXQMMZIWOI-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM533530; PubChem:CID155676947
Local ready
Direct docking supported
E3L023106
BDB023106
BDBM533532
Cc1cc(-c2cnc(NCc3c(F)ccc4c3C(O)CO4)n3cc(C#N)nc23)n(C)n1
C21H18FN7O2
419.420000
HFXKNOVSZHJOEP-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM533532; PubChem:CID150411702
Local ready
Direct docking supported
E3L023107
BDB023107
BDBM533533
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3ccc[nH]c3=O)c2n1
C21H15FN6O2
402.389000
MWJPMJGDQFPEDL-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM533533; PubChem:CID177660377
Local ready
Direct docking supported
E3L023108
BDB023108
US11220509, Example 213
Cc1cc(C2CCCN2C(=O)OC(C)(C)C)ccc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cc(C#N)nc12
C32H33FN6O3
568.653000
ANUTYVDNSIRALF-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM533589; PubChem:CID155676952
Local ready
Direct docking supported
E3L023109
BDB023109
US11220509, Example 228
Cc1cc(-c2cnc(NCc3c(F)ccc4c3OCO4)n3cc(C#N)nc23)n(C)n1
C20H16FN7O2
405.393000
FOBKSISMMONNAI-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM533604; PubChem:CID155788011
Local ready
Direct docking supported
E3L023110
BDB023110
BDBM533606
CN(C)CCn1nccc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cc(C#N)nc12
C23H23FN8O
446.490000
PYPNAVIDPGTVCP-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM533606; PubChem:CID139371722
Local ready
Direct docking supported
E3L023111
BDB023111
US11220509, Example 209
Cn1nc(C(=O)N2CCOCC2)cc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cc(C#N)nc12
C25H23FN8O3
502.510000
DMGKYKIBWJRSOF-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM533610; PubChem:CID155676935
Local ready
Direct docking supported
E3L023112
BDB023112
WO2022081807, Example 1
COc1cccc(OC)c1S(=O)(=O)NC(=O)c1cc2c(F)cc(N3CCC3)cc2o1
C20H19FN2O6S
434.445000
RIAWWGSGYCKQSG-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM533866; PubChem:CID166596308
Local ready
Direct docking supported
E3L023113
BDB023113
WO2022081807, Example 2
CCOc1ccccc1S(=O)(=O)NC(=O)c1cc2c(F)cc(N3CCC3)cc2o1
C20H19FN2O5S
418.446000
XKBVDFIVHCHXTG-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM533867; PubChem:CID166596034
Local ready
Direct docking supported
E3L023114
BDB023114
WO2022081807, Example 3
CCc1ccc(OC2CCCC2)c(S(=O)(=O)NC(=O)c2cc3c(F)cc(N4CCC4)cc3o2)c1
C25H27FN2O5S
486.565000
ZHYKDVWLGMGDJB-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM533868; PubChem:CID166595587
Local ready
Direct docking supported
E3L023115
BDB023115
WO2022081807, Example 4
CCC(C)Oc1ccc(C)cc1S(=O)(=O)NC(=O)c1cc2c(F)cc(N3CCC3)cc2o1
C23H25FN2O5S
460.527000
RFURQFFCSYWIRO-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM533869; PubChem:CID166595810
Local ready
Direct docking supported
E3L023116
BDB023116
WO2022081807, Example 5
O=C(NS(=O)(=O)c1c(OCc2ccccc2)cccc1OC1CCC1)c1cc2c(F)cc(N3CCC3)cc2o1
C29H27FN2O6S
550.608000
OXWQMCIMOJHKFL-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM533872; PubChem:CID166595885
Local ready
Direct docking supported
E3L023117
BDB023117
WO2022081807, Example 6
CCOc1ccc(C)cc1S(=O)(=O)NC(=O)c1cc2c(F)cc(N3CCC3)cc2o1
C21H21FN2O5S
432.473000
QXBAJCPCJWSADB-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM533873; PubChem:CID166596473
Local ready
Direct docking supported
E3L023118
BDB023118
WO2022081807, Example 7
CCOc1cccc(Oc2ccccc2)c1S(=O)(=O)NC(=O)c1cc2c(F)cc(N3CCC3)cc2o1
C26H23FN2O6S
510.543000
XRVTXMCAZCLLRJ-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM533874; PubChem:CID166595783
Local ready
Direct docking supported
E3L023119
BDB023119
WO2022081807, Example 8
COc1ccc2cccnc2c1S(=O)(=O)NC(=O)c1cc2c(F)cc(N3CCC3)cc2o1
C22H18FN3O5S
455.467000
UGINJQWUNRERHN-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM533875; PubChem:CID166596331
Local ready
Direct docking supported
E3L023120
BDB023120
WO2022081807, Example 9
Cc1ccc(OCC2CCCC2)c(S(=O)(=O)NC(=O)c2cc3c(F)cc(N4CCC4)cc3o2)c1
C25H27FN2O5S
486.565000
FNMIWKDCTFOFSQ-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM533876; PubChem:CID166595945
Local ready
Direct docking supported