E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L023061
BDB023061
BDBM533442
CCO/N=c1/[nH]cnc2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)c(Cl)c2)[C@@H](O)[C@H]1O
C19H20Cl2N4O5
455.298000
ZYHQRCUTLQBIMQ-PPLBCVRQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533442; PubChem:CID135307420
Local ready
Direct docking supported
E3L023062
BDB023062
BDBM533443
CCO/N=c1\nc[nH]c2c1ccn2[C@@H]1O[C@H]([C@](C)(O)c2ccc(Cl)cc2)[C@@H](O)[C@H]1O
C20H23ClN4O5
434.880000
KWIOEMTZPKAQPU-HRYJEPKJSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533443; PubChem:CID156334481
Local ready
Direct docking supported
E3L023063
BDB023063
US11220509, Example 70
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(-c3cnc(C4CC4)nc3)c2n1
C23H18FN7O
427.443000
HMDQHNMOZKSKGU-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2
BindingDB, PubChem
BindingDB:BDBM533444; PubChem:CID156050898
Local ready
Direct docking supported
E3L023064
BDB023064
BDBM533445
CO/N=c1\[nH]cnc2c1ncn2[C@@H]1O[C@H]([C@](C)(O)c2ccc(Cl)c(Cl)c2)[C@@H](O)[C@H]1O
C18H19Cl2N5O5
456.286000
MTJCHKWJANVQIN-IZOOLLGQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533445; PubChem:CID154029224
Local ready
Direct docking supported
E3L023065
BDB023065
BDBM533447
CCO/N=c1\[nH]cnc2c1ncn2[C@@H]1O[C@H]([C@](C)(O)c2ccc(Cl)c(Cl)c2)[C@@H](O)[C@H]1O
C19H21Cl2N5O5
470.313000
SOFIEKAPPASUHX-LTFPAQTLSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533447; PubChem:CID156311522
Local ready
Direct docking supported
E3L023066
BDB023066
BDBM533448
CO/N=c1\[nH]cnc2c1ncn2[C@@H]1O[C@H]([C@](C)(O)c2ccc(Cl)c(C)c2)[C@@H](O)[C@H]1O
C19H22ClN5O5
435.868000
INFVRUKRERDCEJ-LTFPAQTLSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533448; PubChem:CID154029229
Local ready
Direct docking supported
E3L023067
BDB023067
BDBM533449
CCO/N=c1\[nH]cnc2c1ncn2[C@@H]1O[C@H]([C@](C)(O)c2ccc(Cl)c(C)c2)[C@@H](O)[C@H]1O
C20H24ClN5O5
449.895000
WZVNKUZQQYTZEC-HRYJEPKJSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533449; PubChem:CID154029230
Local ready
Direct docking supported
E3L023068
BDB023068
BDBM533453
CCO/N=c1\nc[nH]c2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)cc2)[C@@H](O)[C@H]1O
C19H21ClN4O5
420.853000
YTLQXDRQINYMCQ-PPLBCVRQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533453; PubChem:CID135307553
Local ready
Direct docking supported
E3L023069
BDB023069
BDBM533454
CO/N=c1\nc[nH]c2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc(C(F)(F)F)c(C)c2)[C@@H](O)[C@H]1O
C20H21F3N4O5
454.405000
LAEYVCMVWKYXNL-PPLBCVRQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533454; PubChem:CID135307498
Local ready
Direct docking supported
E3L023070
BDB023070
US11220524, Example 99
CCO/N=c1/nc[nH]c2c1ccn2[C@@H]1O[C@H]([C@](C)(O)c2ccc(Cl)c(Cl)c2)[C@@H](O)[C@H]1O
C20H22Cl2N4O5
469.325000
QSWFOYVXGNRPRC-HRYJEPKJSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533455; PubChem:CID135307510
Local ready
Direct docking supported
E3L023071
BDB023071
BDBM533457
CO/N=c1\nc[nH]c2c1c(CCO)cn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)c(Cl)c2)[C@@H](O)[C@H]1O
C20H22Cl2N4O6
485.324000
PTFNNSXKASKNON-QRXRQMIZSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533457; PubChem:CID135307626
Local ready
Direct docking supported
E3L023072
BDB023072
BDBM533458
C#Cc1cn([C@@H]2O[C@H]([C@H](O)c3ccc(Cl)cc3)[C@@H](O)[C@H]2O)c2[nH]cn/c(=N\OC)c12
C20H19ClN4O5
430.848000
SYMWKQKVRYOYLO-QRXRQMIZSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533458; PubChem:CID135307502
Local ready
Direct docking supported
E3L023073
BDB023073
BDBM533460
CO/N=c1\nc[nH]c2c1ccn2[C@@H]1O[C@H]([C@H](OC)c2ccc(Cl)c(F)c2)[C@@H](O)[C@H]1O
C19H20ClFN4O5
438.843000
INBCXOLCERZRTM-IPXJXJKCSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533460; PubChem:CID135307471
Local ready
Direct docking supported
E3L023074
BDB023074
BDBM533461
O[C@@H]1[C@H](O)[C@@H]([C@H](O)c2ccc(Cl)c(Cl)c2)O[C@H]1n1ccc2/c(=N/OCC(F)(F)F)nc[nH]c21
C19H17Cl2F3N4O5
509.268000
MGSHKRIIABUSCJ-KQVLKZGSSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533461; PubChem:CID135307589
Local ready
Direct docking supported
E3L023075
BDB023075
BDBM533463
C#Cc1cn([C@@H]2O[C@H]([C@H](O)c3ccc(Cl)c(Cl)c3)[C@@H](O)[C@H]2O)c2[nH]cn/c(=N\OC)c12
C20H18Cl2N4O5
465.293000
WIPONRQAVGXVBZ-QRXRQMIZSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533463; PubChem:CID135307549
Local ready
Direct docking supported
E3L023076
BDB023076
BDBM533464
C[C@@](O)(C1C=C(Cl)C(Cl)=CC1)[C@H]1O[C@@H](n2ccc3/c(=N\O)nc[nH]c32)[C@H](O)[C@@H]1O
C18H20Cl2N4O5
443.287000
XXYWLEVHJQGNLG-JVKLTQNRSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533464; PubChem:CID155169713
Local ready
Direct docking supported
E3L023077
BDB023077
BDBM533466
O[C@@H]1[C@H](O)[C@@H]([C@H](O)c2ccc(Cl)c(Cl)c2)O[C@H]1n1ccc2/c(=N/OCC(F)F)nc[nH]c21
C19H18Cl2F2N4O5
491.278000
YXCDHKKXINHAMP-PPLBCVRQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533466; PubChem:CID155175363
Local ready
Direct docking supported
E3L023078
BDB023078
BDBM533468
CO/N=c1\nc[nH]c2c1c(F)cn2[C@@H]1O[C@H]([C@](C)(O)c2ccc(Cl)c(Cl)c2)[C@@H](O)[C@H]1O
C19H19Cl2FN4O5
473.288000
FTYSYXFESRRYIH-LTFPAQTLSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533468; PubChem:CID155169747
Local ready
Direct docking supported
E3L023079
BDB023079
BDBM533469
C[C@@](O)(c1ccc(Cl)c(Cl)c1)[C@H]1O[C@@H](n2ccc3/c(=N/O)nc[nH]c32)[C@H](O)[C@@H]1O
C18H18Cl2N4O5
441.271000
GAFFRVOQKBCJAR-IZOOLLGQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533469; PubChem:CID156334599
Local ready
Direct docking supported
E3L023080
BDB023080
US11220524, Example 25-B
N/N=c1/nc[nH]c2c1ccn2[C@@H]1C[C@H]([C@H](O)c2ccc(Cl)cc2)[C@@H](O)[C@H]1O
C18H20ClN5O3
389.843000
JKJXRCXBHKSCNR-QCODTGAPSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM533470; PubChem:CID155169662
Local ready
Direct docking supported