E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L024341
BDB024341
US11274090, Example 106 Isomer 2
C[C@H](CN[C@@H](C(=O)Nc1ccc(-c2cc(=O)n(C)cn2)cn1)c1ccccc1)c1ccc(C#N)cc1
C28H26N6O2
478.556000
IAAVLAHPJUPJCF-XHCCPWGMSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542328; PubChem:CID164515082
Local ready
Direct docking supported
E3L024342
BDB024342
US11274090, Example 107 Isomer 1
Cc1nc(-c2ccc(NC(=O)[C@H](NC[C@H](C)c3ccc(C#N)cc3)c3ccccc3)nc2)no1
C26H24N6O2
452.518000
SMKDVYXRUJWTBD-BXKMTCNYSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542329; PubChem:CID164515083
Local ready
Direct docking supported
E3L024343
BDB024343
US11274090, Example 107 Isomer 2
Cc1nc(-c2ccc(NC(=O)[C@H](NC[C@@H](C)c3ccc(C#N)cc3)c3ccccc3)nc2)no1
C26H24N6O2
452.518000
SMKDVYXRUJWTBD-MZNJEOGPSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542330; PubChem:CID156293417
Local ready
Direct docking supported
E3L024344
BDB024344
US11274090, Example 108 Isomer 1
C[C@@H](CN[C@@H](C(=O)Nc1ccc(N2CCN(C)S2(=O)=O)cn1)c1ccccc1)c1ccc(C#N)cc1
C26H28N6O3S
504.616000
XSMIFSLKPSDHSE-UQBPGWFLSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542331; PubChem:CID164515084
Local ready
Direct docking supported
E3L024345
BDB024345
US11274090, Example 108 Isomer 2
C[C@H](CN[C@@H](C(=O)Nc1ccc(N2CCN(C)S2(=O)=O)cn1)c1ccccc1)c1ccc(C#N)cc1
C26H28N6O3S
504.616000
XSMIFSLKPSDHSE-KBMIEXCESA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542332; PubChem:CID156293415
Local ready
Direct docking supported
E3L024346
BDB024346
US11274090, Example 108 Isomer 3
C[C@@H](CN[C@H](C(=O)Nc1ccc(N2CCN(C)S2(=O)=O)cn1)c1ccccc1)c1ccc(C#N)cc1
C26H28N6O3S
504.616000
XSMIFSLKPSDHSE-DFBJGRDBSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542333; PubChem:CID164515085
Local ready
Direct docking supported
E3L024347
BDB024347
US11274090, Example 108 Isomer 4
C[C@H](CN[C@H](C(=O)Nc1ccc(N2CCN(C)S2(=O)=O)cn1)c1ccccc1)c1ccc(C#N)cc1
C26H28N6O3S
504.616000
XSMIFSLKPSDHSE-CLOONOSVSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542334; PubChem:CID139426049
Local ready
Direct docking supported
E3L024348
BDB024348
US11274090, Example 109 Isomer 1
C[C@@H](CN[C@@H](C(=O)Nc1ccc(C2CC(=O)N(C)C2)cn1)c1ccccc1)c1ccc(C#N)cc1
C28H29N5O2
467.573000
MKXSRLMGJRPXLK-WWIFXDDTSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542335; PubChem:CID164515086
Local ready
Direct docking supported
E3L024349
BDB024349
US11274090, Example 109 Isomer 2
C[C@H](CN[C@@H](C(=O)Nc1ccc(C2CC(=O)N(C)C2)cn1)c1ccccc1)c1ccc(C#N)cc1
C28H29N5O2
467.573000
MKXSRLMGJRPXLK-GMMDXNFMSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542336; PubChem:CID156293872
Local ready
Direct docking supported
E3L024350
BDB024350
US11274090, Example 109 Isomer 4
C[C@H](CN[C@H](C(=O)Nc1ccc(C2CC(=O)N(C)C2)cn1)c1ccccc1)c1ccc(C#N)cc1
C28H29N5O2
467.573000
MKXSRLMGJRPXLK-FZPGJJMXSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542338; PubChem:CID139426052
Local ready
Direct docking supported
E3L024351
BDB024351
US11274090, Example 110 Isomer 1
Cn1cc(-c2ccc(NC(=O)[C@@H](NCCc3ccc(C#N)cc3)c3ccccc3F)nc2)cn1
C26H23FN6O
454.509000
RUXFNGAPWMLIEQ-VWLOTQADSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542339; PubChem:CID139426079
Local ready
Direct docking supported
E3L024352
BDB024352
US11274090, Example 110 Isomer 2
Cn1cc(-c2ccc(NC(=O)[C@H](NCCc3ccc(C#N)cc3)c3ccccc3F)nc2)cn1
C26H23FN6O
454.509000
RUXFNGAPWMLIEQ-RUZDIDTESA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542340; PubChem:CID156273065
Local ready
Direct docking supported
E3L024353
BDB024353
US11274090, Example 111 Isomer 1
Cn1cc(-c2ccc(NC(=O)[C@@H](NCCc3ccc(C#N)cc3)c3cccc(F)c3)nc2)cn1
C26H23FN6O
454.509000
UWJXDHWBSXCZEJ-VWLOTQADSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542341; PubChem:CID139426057
Local ready
Direct docking supported
E3L024354
BDB024354
US11274090, Example 111 Isomer 2
Cn1cc(-c2ccc(NC(=O)[C@H](NCCc3ccc(C#N)cc3)c3cccc(F)c3)nc2)cn1
C26H23FN6O
454.509000
UWJXDHWBSXCZEJ-RUZDIDTESA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542342; PubChem:CID156273030
Local ready
Direct docking supported
E3L024355
BDB024355
US11274090, Example 112 Isomer 1
Cn1cc(-c2ccc(NC(=O)[C@@H](NCCc3ccc(C#N)cc3)c3ccc(F)cc3)nc2)cn1
C26H23FN6O
454.509000
GPFNYJBVYNNRMN-VWLOTQADSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542343; PubChem:CID164515087
Local ready
Direct docking supported
E3L024356
BDB024356
US11274090, Example 112 Isomer 2
Cn1cc(-c2ccc(NC(=O)[C@H](NCCc3ccc(C#N)cc3)c3ccc(F)cc3)nc2)cn1
C26H23FN6O
454.509000
GPFNYJBVYNNRMN-RUZDIDTESA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542344; PubChem:CID156273042
Local ready
Direct docking supported
E3L024357
BDB024357
US11274090, Example 113 Isomer 1
Cc1nn(C)cc1-c1ccc(NC(=O)[C@H](NC[C@H](C)c2ccc(C#N)cc2)c2ccccc2)nc1
C28H28N6O
464.573000
NHKFLKASNXUHCJ-UZTOHYMASA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542345; PubChem:CID164515088
Local ready
Direct docking supported
E3L024358
BDB024358
US11274090, Example 113 Isomer 2
Cc1nn(C)cc1-c1ccc(NC(=O)[C@H](NC[C@@H](C)c2ccc(C#N)cc2)c2ccccc2)nc1
C28H28N6O
464.573000
NHKFLKASNXUHCJ-XHCCPWGMSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542346; PubChem:CID156293909
Local ready
Direct docking supported
E3L024359
BDB024359
US11274090, Example 114 Isomer 1
Cc1c(-c2ccc(NC(=O)[C@H](NC[C@H](C)c3ccc(C#N)cc3)c3ccccc3)nc2)cnn1C
C28H28N6O
464.573000
LVFBAGBDMLSWSU-UZTOHYMASA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542347; PubChem:CID164515089
Local ready
Direct docking supported
E3L024360
BDB024360
US11274090, Example 114 Isomer 2
Cc1c(-c2ccc(NC(=O)[C@H](NC[C@@H](C)c3ccc(C#N)cc3)c3ccccc3)nc2)cnn1C
C28H28N6O
464.573000
LVFBAGBDMLSWSU-XHCCPWGMSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM542348; PubChem:CID156293908
Local ready
Direct docking supported