E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026281
BDB026281
BDBM553623
C[C@@H]1CN(c2cc(F)c(-c3cc(F)c(C(=O)NC4CCCCC4(C)C)c(F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C35H39F6N5O3
691.717000
ZCOKREAGOYGHLD-LIUALLIOSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553623
Local ready
Direct docking supported
E3L026282
BDB026282
BDBM553624
C[C@@H]1CN(c2cc(F)c(-c3cc(F)c(C(=O)NCC4CC4)c(F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H31F6N5O3
635.609000
CVQUHVIQKMQUSC-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553624
Local ready
Direct docking supported
E3L026283
BDB026283
BDBM553625
C[C@@H]1CN(c2cc(F)c(-c3csc(CN4CCOCC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H32F4N6O3S
608.662000
VKUXPMVXGMBBKJ-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553625; PubChem:CID137377357
Local ready
Direct docking supported
E3L026284
BDB026284
BDBM553626
C[C@H]1CN(c2cc(F)c(-c3cnn(CCN4CCOCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C28H33F4N7O3
591.610000
ACWAMAQLJYIEEW-SFHVURJKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553626; PubChem:CID138551438
Local ready
Direct docking supported
E3L026285
BDB026285
US11319299, Example 715
C[C@H]1CN(c2cc(F)c(-c3cnn(CCN4CCOCC4)c3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)F)CCN1C
C29H36F3N7O3
587.647000
RVZIRFGDVGNDSW-IBGZPJMESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553627; PubChem:CID138551517
Local ready
Direct docking supported
E3L026286
BDB026286
BDBM553628
C[C@@H]1CN(c2cc(F)c(-c3cnn(CCN4CCOCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H35F4N7O3
605.637000
LTKZDPIYXMOFLE-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553628; PubChem:CID137377088
Local ready
Direct docking supported
E3L026287
BDB026287
US11319299, Example 717
C[C@@H]1CN(c2cc(F)c(-c3cnn(CCN4CCOCC4)c3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)F)C[C@H](C)N1C
C30H38F3N7O3
601.674000
QWMFKMARCSBQKA-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553629; PubChem:CID137377608
Local ready
Direct docking supported
E3L026288
BDB026288
BDBM553630
C[C@H]1CN(c2cc(F)c(-c3ccnc(N4CCOCC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C27H29F4N7O3
575.567000
MXTKMOOEBWQNGY-INIZCTEOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553630; PubChem:CID138551522
Local ready
Direct docking supported
E3L026289
BDB026289
BDBM553631
C[C@H]1CN(c2cc(F)c(-c3cccc(N4CCOCC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C28H30F4N6O3
574.579000
JIAIMNMFSXSUHU-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553631; PubChem:CID138551527
Local ready
Direct docking supported
E3L026290
BDB026290
BDBM553632
C[C@H]1CN(c2cc(F)c(-c3ccnc(N4CCOCC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CCN1C
C27H30F3N7O3
557.577000
WEVFDUUIPCSGOM-INIZCTEOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553632; PubChem:CID138551404
Local ready
Direct docking supported
E3L026291
BDB026291
BDBM553633
C[C@H]1CN(c2cc(F)c(-c3cccc(N4CCOCC4)n3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)CCN1C
C28H31F3N6O3
556.589000
MOKPIJBXSJAXJB-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553633; PubChem:CID138551444
Local ready
Direct docking supported
E3L026292
BDB026292
US11319299, Example 722
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)F)C[C@H](C)N1C
C29H32F4N6O2
572.607000
ONWHNLJLIQBGSA-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553634; PubChem:CID138542036
Local ready
Direct docking supported
E3L026293
BDB026293
BDBM553635
CC(C)OC(=O)N1CCC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)CC1
C30H38F3N5O4
589.659000
NGKBEYIANMQSOT-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553635
Local ready
Direct docking supported
E3L026294
BDB026294
BDBM553636
CC(C)OC(=O)N1CC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)F)c(N3CCN(C)[C@@H](C)C3)cc2F)CC1
C28H34F3N5O4
561.605000
TVERYNURYMWSHK-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553636
Local ready
Direct docking supported
E3L026295
BDB026295
BDBM553637
CC(C)OC(=O)N1CCC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)C1
C29H36F3N5O4
575.632000
LWVCIKLZNBUTPO-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553637
Local ready
Direct docking supported
E3L026296
BDB026296
BDBM553638
CC(C)OC(=O)N1CCC=C(c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)F)c(N3CCN(C)[C@@H](C)C3)cc2F)C1
C28H34F3N5O4
561.605000
AMVNYEBNKVHOHM-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553638
Local ready
Direct docking supported
E3L026297
BDB026297
US11319299, Example 727
CC(C)OC(=O)N1CC=C(c2cc(NC(=O)c3ccc(F)cc3C(F)(F)F)c(N3CCN(C)[C@@H](C)C3)cc2F)CC1
C29H33F5N4O3
580.598000
FPHQKXFJUXCMGE-SFHVURJKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553639; PubChem:CID138551674
Local ready
Direct docking supported
E3L026298
BDB026298
US11319299, Example 728
CC(C)OC(=O)N1CCC=C(c2cc(NC(=O)c3ccc(F)cc3C(F)(F)F)c(N3CCN(C)[C@@H](C)C3)cc2F)C1
C29H33F5N4O3
580.598000
VWFZJHLHORFOES-SFHVURJKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553640; PubChem:CID138551662
Local ready
Direct docking supported
E3L026299
BDB026299
BDBM553641
C[C@@H]1CN(c2cc(F)c(C3=CCCN(C(=O)OC4(C)CCC4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)C[C@H](C)N1C
C32H40F3N5O4
615.697000
YGEHMNUODAWINV-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553641
Local ready
Direct docking supported
E3L026300
BDB026300
BDBM553642
C[C@@H]1CN(c2cc(F)c(C3=CCCN(C(=O)OC4CC(F)(F)C4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)F)C[C@H](C)N1C
C31H36F5N5O4
637.650000
HVHIJYYQVAOAFO-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553642
Local ready
Direct docking supported