E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026321
BDB026321
BDBM553664
C[C@@H]1CN(c2cc(F)c(-c3cc(F)c(C(=O)N(C)C4CCCCC4)c(F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C34H37F6N5O3
677.690000
VNLQJEISAIKCOO-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553664
Local ready
Direct docking supported
E3L026322
BDB026322
BDBM553665
C[C@@H]1CN(c2cc(F)c(-c3cc(F)c(C(=O)N(C)C4CCCC4)c(F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C33H35F6N5O3
663.663000
UHGONJRGWJDZJB-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553665
Local ready
Direct docking supported
E3L026323
BDB026323
BDBM553666
C[C@@H]1CN(c2cc(F)c(-c3cc(F)c(C(=O)N[C@@H]4CCOC4)c(F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H31F6N5O4
651.608000
DCXUVEFLYACNAD-SOLBZPMBSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553666
Local ready
Direct docking supported
E3L026324
BDB026324
BDBM553667
C[C@@H]1CN(c2cc(F)c(-c3cc(F)c(C(=O)N(C)C4COC4)c(F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H31F6N5O4
651.608000
RRTKJZQTGZFVGF-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553667
Local ready
Direct docking supported
E3L026325
BDB026325
US11319287, Example 7
Cc1noc(C)c1-c1cccc2c1CCN2C(=O)[C@@H]1CCCN1C#N
C19H20N4O2
336.395000
MRVYZKBROYHVDF-KRWDZBQOSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM553796; PubChem:CID135205707
Local ready
Direct docking supported
E3L026326
BDB026326
BDBM553937
CCc1cc2cnc(CN3CCN(c4ccc(C(=O)NC)nc4)CC3)cc2[nH]c1=O
C22H26N6O2
406.490000
KQWMSOMOYSGKJA-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553937; PubChem:CID155587004
Local ready
Direct docking supported
E3L026327
BDB026327
BDBM553938
CCc1cc2cnc(CN3CCN(c4ccc(C(=O)NC)nc4F)CC3)cc2[nH]c1=O
C22H25FN6O2
424.480000
XKSQRLIEJSXRFK-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553938; PubChem:CID155586926
Local ready
Direct docking supported
E3L026328
BDB026328
BDBM553939
CCc1cc2cnc(CN3CCN(c4ccc(C(=O)NC)nc4Cl)CC3)cc2[nH]c1=O
C22H25ClN6O2
440.935000
HBQCPOVYLRNWOU-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553939; PubChem:CID155586931
Local ready
Direct docking supported
E3L026329
BDB026329
Saruparib
CCc1cc2ncc(CN3CCN(c4ccc(C(=O)NC)nc4)CC3)cc2[nH]c1=O
C22H26N6O2
406.490000
WQAVGRAETZEADU-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553940; PubChem:CID155586901
Local ready
Direct docking supported
E3L026330
BDB026330
BDBM553941
CCc1cc2ncc(CN3CCN(c4ccc(C(=O)NC)nc4F)CC3)cc2[nH]c1=O
C22H25FN6O2
424.480000
LZXFKOUZJFPYDT-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553941; PubChem:CID155586969
Local ready
Direct docking supported
E3L026331
BDB026331
BDBM553942
CCc1cc2ncc(CN3CCN(c4ccc(C(=O)NC)nc4Cl)CC3)cc2[nH]c1=O
C22H25ClN6O2
440.935000
VXKAXDSVEXWYFC-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553942; PubChem:CID155586960
Local ready
Direct docking supported
E3L026332
BDB026332
BDBM553943
CCc1cc2ncc(CN3CCN(c4ccc(C(N)=O)nc4)CC3)cc2[nH]c1=O
C21H24N6O2
392.463000
JMWJWPBEGHFNBW-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553943; PubChem:CID155586979
Local ready
Direct docking supported
E3L026333
BDB026333
BDBM553944
CCc1nc(C(=O)NC)ccc1N1CCN(Cc2ccc3nc(CC)c(=O)[nH]c3c2)CC1
C24H30N6O2
434.544000
MXXCWTPFDLFEPI-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553944; PubChem:CID155586986
Local ready
Direct docking supported
E3L026334
BDB026334
BDBM553945
CCc1nc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4C(F)(F)F)CC3)cc2[nH]c1=O
C23H25F3N6O2
474.487000
WLNYGEDDWHJYNS-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553945; PubChem:CID155586940
Local ready
Direct docking supported
E3L026335
BDB026335
BDBM553946
CCc1nc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4C(F)F)CC3)cc2[nH]c1=O
C23H26F2N6O2
456.497000
SBLVNLSHQHGWMG-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553946; PubChem:CID155586893
Local ready
Direct docking supported
E3L026336
BDB026336
BDBM553947
CCc1nc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4)CC3)cc2[nH]c1=O
C22H26N6O2
406.490000
WWBAAJGNNHHVBK-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553947; PubChem:CID155587002
Local ready
Direct docking supported
E3L026337
BDB026337
BDBM553948
CCc1nc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4F)CC3)cc2[nH]c1=O
C22H25FN6O2
424.480000
IEYVHGZKGZORPQ-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553948; PubChem:CID155586983
Local ready
Direct docking supported
E3L026338
BDB026338
BDBM553950
CCc1nc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4C)CC3)cc2[nH]c1=O
C23H28N6O2
420.517000
JZCSKYRUZXBXOE-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553950; PubChem:CID155586922
Local ready
Direct docking supported
E3L026339
BDB026339
BDBM553951
CCc1nc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4Cl)CC3)cc2[nH]c1=O
C22H25ClN6O2
440.935000
NNORNVGSHBFFMI-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553951; PubChem:CID155586892
Local ready
Direct docking supported
E3L026340
BDB026340
BDBM553952
CNC(=O)c1ccc(N2CCN(Cc3ccc4nc(C(F)(F)F)c(=O)[nH]c4c3)CC2)cn1
C21H21F3N6O2
446.433000
LBINYHXQLJHFDM-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM553952; PubChem:CID155586971
Local ready
Direct docking supported