E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L027041
BDB027041
US11414384, Example 123 Isomer 2
CN1CCN(c2ccc3c(C(=O)[C@@H](NCCc4ccc(F)cc4)c4ccccc4)c[nH]c3c2)CC1
C29H31FN4O
470.592000
ODJPJHFFAVCQGD-NDEPHWFRSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564424; PubChem:CID156133854
Local ready
Direct docking supported
E3L027042
BDB027042
US11414384, Example 124 Isomer 1
CN1CCN(c2ccc3c(C(=O)[C@H](NCCc4ccc(S(N)(=O)=O)cc4)c4ccccc4)c[nH]c3c2)CC1
C29H33N5O3S
531.682000
QPVVHHBHYIMUBY-MUUNZHRXSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564425; PubChem:CID156133573
Local ready
Direct docking supported
E3L027043
BDB027043
US11414384, Example 124 Isomer 2
CN1CCN(c2ccc3c(C(=O)[C@@H](NCCc4ccc(S(N)(=O)=O)cc4)c4ccccc4)c[nH]c3c2)CC1
C29H33N5O3S
531.682000
QPVVHHBHYIMUBY-NDEPHWFRSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564426; PubChem:CID156133572
Local ready
Direct docking supported
E3L027044
BDB027044
US11414384, Example 125 Isomer 1
N#Cc1ccc(CCN[C@H](C(=O)c2c[nH]c3cc(N4CCCC4)ccc23)c2ccccc2)cc1
C29H28N4O
448.570000
DDNUAYKNTZWGNB-NDEPHWFRSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564428; PubChem:CID139422802
Local ready
Direct docking supported
E3L027045
BDB027045
US11414384, Example 125 Isomer 2
N#Cc1ccc(CCN[C@@H](C(=O)c2c[nH]c3cc(N4CCCC4)ccc23)c2ccccc2)cc1
C29H28N4O
448.570000
DDNUAYKNTZWGNB-MUUNZHRXSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564429; PubChem:CID156133725
Local ready
Direct docking supported
E3L027046
BDB027046
US11414384, Example 126 Isomer 1
CN1CCC(Oc2ccc3c(C(=O)[C@@H](NCCc4ccc(C#N)cc4)c4ccccc4)c[nH]c3c2)CC1
C31H32N4O2
492.623000
HEVOBGUQPMCOCP-PMERELPUSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564433; PubChem:CID139422806
Local ready
Direct docking supported
E3L027047
BDB027047
US11414384, Example 126 Isomer 2
CN1CCC(Oc2ccc3c(C(=O)[C@H](NCCc4ccc(C#N)cc4)c4ccccc4)c[nH]c3c2)CC1
C31H32N4O2
492.623000
HEVOBGUQPMCOCP-SSEXGKCCSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564436; PubChem:CID156114863
Local ready
Direct docking supported
E3L027048
BDB027048
US11414384, Example 127 Isomer 1
COCCn1cc(C(=O)[C@@H](NCCc2ccc(Cl)cc2)c2ccccc2)c2ccccc21
C27H27ClN2O2
446.978000
CKQVANWZQOGQOM-SANMLTNESA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564437; PubChem:CID139422877
Local ready
Direct docking supported
E3L027049
BDB027049
US11414384, Example 127 Isomer 2
COCCn1cc(C(=O)[C@H](NCCc2ccc(Cl)cc2)c2ccccc2)c2ccccc21
C27H27ClN2O2
446.978000
CKQVANWZQOGQOM-AREMUKBSSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564439; PubChem:CID156114895
Local ready
Direct docking supported
E3L027050
BDB027050
US11414384, Example 128 Isomer 1
O=C(c1cn(CCO)c2ccccc12)[C@@H](NCCc1ccc(Cl)cc1)c1ccccc1
C26H25ClN2O2
432.951000
LMCUAZCDAWASIO-VWLOTQADSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564440; PubChem:CID156133571
Local ready
Direct docking supported
E3L027051
BDB027051
US11414384, Example 128 Isomer 2
O=C(c1cn(CCO)c2ccccc12)[C@H](NCCc1ccc(Cl)cc1)c1ccccc1
C26H25ClN2O2
432.951000
LMCUAZCDAWASIO-RUZDIDTESA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564441; PubChem:CID156114856
Local ready
Direct docking supported
E3L027052
BDB027052
US11414384, Example 129 Isomer 1
CCn1cc(C(=O)[C@@H](NCCc2ccc(Cl)cc2)c2ccccc2)c2ccccc21
C26H25ClN2O
416.952000
MVZSYSMMLMKPFT-VWLOTQADSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564442; PubChem:CID156133611
Local ready
Direct docking supported
E3L027053
BDB027053
US11414384, Example 129 Isomer 2
CCn1cc(C(=O)[C@H](NCCc2ccc(Cl)cc2)c2ccccc2)c2ccccc21
C26H25ClN2O
416.952000
MVZSYSMMLMKPFT-RUZDIDTESA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564444; PubChem:CID156114819
Local ready
Direct docking supported
E3L027054
BDB027054
US11414384, Example 130 Isomer 1
O=C(c1cn(CC(F)(F)F)c2ccccc12)[C@@H](NCCc1ccc(Cl)cc1)c1ccccc1
C26H22ClF3N2O
470.922000
QVKRXGBEVPOXTH-DEOSSOPVSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564448; PubChem:CID156133614
Local ready
Direct docking supported
E3L027055
BDB027055
US11414384, Example 130 Isomer 2
O=C(c1cn(CC(F)(F)F)c2ccccc12)[C@H](NCCc1ccc(Cl)cc1)c1ccccc1
C26H22ClF3N2O
470.922000
QVKRXGBEVPOXTH-XMMPIXPASA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564449; PubChem:CID156114876
Local ready
Direct docking supported
E3L027056
BDB027056
US11414384, Example 131 Isomer 1
CNC(=O)c1ccc(CCN[C@@H](C(=O)c2c[nH]c3cc(-c4cnn(C)c4)ccc23)c2ccccc2)cc1
C30H29N5O2
491.595000
NQCGMDQCBPYFRF-MUUNZHRXSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564452; PubChem:CID156114822
Local ready
Direct docking supported
E3L027057
BDB027057
US11414384, Example 131 Isomer 2
CNC(=O)c1ccc(CCN[C@H](C(=O)c2c[nH]c3cc(-c4cnn(C)c4)ccc23)c2ccccc2)cc1
C30H29N5O2
491.595000
NQCGMDQCBPYFRF-NDEPHWFRSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564453; PubChem:CID139423064
Local ready
Direct docking supported
E3L027058
BDB027058
US11414384, Example 132 Isomer 1
O=C(O)c1ccc(CCN[C@H](C(=O)c2c[nH]c3ccccc23)c2ccccc2)cc1
C25H22N2O3
398.462000
HXHMRYUSFNGAPA-QHCPKHFHSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564456; PubChem:CID156133904
Local ready
Direct docking supported
E3L027059
BDB027059
US11414384, Example 132 Isomer 2
O=C(O)c1ccc(CCN[C@@H](C(=O)c2c[nH]c3ccccc23)c2ccccc2)cc1
C25H22N2O3
398.462000
HXHMRYUSFNGAPA-HSZRJFAPSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564457; PubChem:CID156114896
Local ready
Direct docking supported
E3L027060
BDB027060
US11414384, Example 133 Isomer 1
NC(=O)c1ccc(CCN[C@H](C(=O)c2c[nH]c3ccccc23)c2ccccc2)cc1
C25H23N3O2
397.478000
CNOFEEQBCYLVBC-QHCPKHFHSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM564459; PubChem:CID156133906
Local ready
Direct docking supported