E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L028581
BDB028581
US11485731, Example 4AB
O=C(OCC(O)CN1CCc2ccsc2C1)N1CCc2ccccc2C1
C20H24N2O3S
372.490000
GVAOBCHNPLMKKK-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579974; PubChem:CID142428225
Local ready
Direct docking supported
E3L028582
BDB028582
US11485731, Example 4AC
O=C(OCC(O)CN1CCc2sccc2C1)N1CCCC(c2ccccc2)C1
C22H28N2O3S
400.544000
JMIQDMQDHKQERU-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579975; PubChem:CID142428269
Local ready
Direct docking supported
E3L028583
BDB028583
US11485731, Example 4AD
O=C(OCC(O)CN1CCc2ccsc2C1)N1CCCC(c2ccccc2)C1
C22H28N2O3S
400.544000
PEPGAQWIVMYBNJ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579976; PubChem:CID142428340
Local ready
Direct docking supported
E3L028584
BDB028584
US11485731, Example 4AE
O=C(OCC(O)CN1CCc2sccc2C1)N1CCC(c2ccccc2)C1
C21H26N2O3S
386.517000
ZRGSHHBXPGVJSR-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579977; PubChem:CID142428246
Local ready
Direct docking supported
E3L028585
BDB028585
US11485731, Example 4AF
O=C(OCC(O)CN1CCc2ccsc2C1)N1CCC(c2ccccc2)C1
C21H26N2O3S
386.517000
OWAZONZGOAXGGP-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579978; PubChem:CID142428216
Local ready
Direct docking supported
E3L028586
BDB028586
US11485731, Example 4AG
O=C(OCC(O)CN1CCc2ccccc2C1)N1CCCc2ccccc21
C22H26N2O3
366.461000
BKVVZVCNRIGPNS-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579979; PubChem:CID142428333
Local ready
Direct docking supported
E3L028587
BDB028587
US11485731, Example 4AH
O=C(OCC(O)CN1CCc2ccccc2C1)N1CCCC(c2ccccc2)C1
C24H30N2O3
394.515000
WRFFICVFFHXHDL-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579980; PubChem:CID142428389
Local ready
Direct docking supported
E3L028588
BDB028588
US11485731, Example 5C
O=C(NC[C@H](O)CN1CCc2ccccc2C1)N1CCS[C@@H](c2ccccc2)C1
C23H29N3O2S
411.571000
VQWMIOJCLWPRMA-FCHUYYIVSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579983; PubChem:CID142428315
Local ready
Direct docking supported
E3L028589
BDB028589
US11485731, Example 5E
O=C(NC[C@H](O)CN1CCc2ccccc2C1)N1CCC[C@@H](c2ccccn2)C1
C23H30N4O2
394.519000
VAEAPPUJJADYEH-RTWAWAEBSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579985; PubChem:CID142428243
Local ready
Direct docking supported
E3L028590
BDB028590
US11485731, Example 5G
O=C(NC[C@H](O)CN1CCc2ccccc2C1)N1CCC[C@@H](C2CCOCC2)C1
C23H35N3O3
401.551000
BNIVCVQORGPNBY-YADHBBJMSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579987; PubChem:CID142428348
Local ready
Direct docking supported
E3L028591
BDB028591
US11485731, Example 6A
O=C(NCCCN1CCc2ccccc2C1)N1CCC(c2ccccc2)C1
C23H29N3O
363.505000
LKQDIWQNXVMDDF-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579989; PubChem:CID53614022
Local ready
Direct docking supported
E3L028592
BDB028592
US11485731, Example 6B
O=C(NCCCN1CCc2ccccc2C1)N1CCCC(c2ccccc2)C1
C24H31N3O
377.532000
XOSYPQJANANERF-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579990; PubChem:CID142428326
Local ready
Direct docking supported
E3L028593
BDB028593
US11485731, Example 7
O=C(OCCCN1CCc2ccccc2C1)N1CCC(c2ccccc2)C1
C23H28N2O2
364.489000
SLRBDQNHNAHSCJ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579991; PubChem:CID142428320
Local ready
Direct docking supported
E3L028594
BDB028594
Ksq-4279
COc1ncnc(C2CC2)c1-c1ncc2cnn(Cc3ccc(-c4nc(C(F)(F)F)cn4C(C)C)cc3)c2n1
C27H25F3N8O
534.546000
KCBWAFJCKVKYHO-UHFFFAOYSA-N Q8TAF3 WD repeat-containing protein 48
BindingDB, PubChem
BindingDB:BDBM580031; PubChem:CID150782011
Local ready
Direct docking supported
E3L028595
BDB028595
US11485738, Example 169
COC(=O)c1cc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cc(C#N)nc23)n(C)n1
C22H18FN7O3
447.430000
HTQKSDCXETZAJW-UHFFFAOYSA-N O75530, Q09028 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM580118; PubChem:CID156051113
Local ready
Direct docking supported
E3L028596
BDB028596
BDBM580138
Cc1ncccc1-c1cnc(NCc2c(F)ccc3occc23)n2cc(C#N)nc12
C22H15FN6O
398.401000
QRQXMDNBSDFOPU-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM580138; PubChem:CID155676961
Local ready
Direct docking supported
E3L028597
BDB028597
US11485738, Example 23
Cc1nn(C(C)C)cc1-c1cnc(NCc2c(F)ccc3c2CCO3)n2cc(C#N)nc12
C23H22FN7O
431.475000
ZDBPLSPFJZAYOW-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM580139; PubChem:CID139371257
Local ready
Direct docking supported
E3L028598
BDB028598
US11485738, Example 140
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(C3CCNCC3)c2n1
C21H21FN6O
392.438000
USKDFXYKTAACBI-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM580256; PubChem:CID155676928
Local ready
Direct docking supported
E3L028599
BDB028599
US11485738, Example 141
N#Cc1cn2c(NCc3c(F)ccc4c3CCO4)ncc(C3CCOCC3)c2n1
C21H20FN5O2
393.422000
JRCAHVGSMADQHZ-UHFFFAOYSA-N O75530, Q09028 Histone-lysine N-methyltransferase EZH2, Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM580257; PubChem:CID155676908
Local ready
Direct docking supported
E3L028600
BDB028600
BDBM580325
CN(C)Cc1cc(-c2cnc(NCc3c(F)ccc4c3CCO4)n3cc(C#N)nc23)n(C)n1
C23H23FN8O
446.490000
WDAFAPSQJVMAAM-UHFFFAOYSA-N O75530, Q09028 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM580325; PubChem:CID155676982
Local ready
Direct docking supported