E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L029281
BDB029281
US11524962, Example 52
Cc1ncnc2c1ccn2[C@@H]1O[C@H]([C@H](O)c2nc3c(s2)CCC3)[C@@H](O)[C@H]1O
C18H20N4O4S
388.449000
LGXJELYWRWBUQZ-SFUJAXRZSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM584248; PubChem:CID162505642
Local ready
Direct docking supported
E3L029282
BDB029282
US11524962, Example 53
OCCc1ncnc2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc3c(c2)CC3)[C@@H](O)[C@H]1O
C21H23N3O5
397.431000
PQELDOIJDUZCHE-TWHPPBISSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM584249; PubChem:CID162505677
Local ready
Direct docking supported
E3L029283
BDB029283
US11524962, Example 54
CNc1ncnc2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc3c(c2)CC3)[C@@H](O)[C@H]1O
C20H22N4O4
382.420000
OVZNAPQBSKTSCY-QRXRQMIZSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM584250; PubChem:CID162505629
Local ready
Direct docking supported
E3L029284
BDB029284
US11524962, Example 55
O[C@@H]1[C@H](O)[C@@H]([C@H](O)c2ccc3c(c2)CC3)O[C@H]1n1ccc2c(CCOCc3ccccc3)ncnc21
C28H29N3O5
487.556000
YZAQLOLHYLSUEL-TUDBGTMHSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM584251; PubChem:CID162505636
Local ready
Direct docking supported
E3L029285
BDB029285
US11524962, Example 56
O[C@@H]1[C@H](O)[C@@H]([C@H](O)c2ccc3c(c2)CC3)O[C@H]1n1ccc2c(Cl)ncnc21
C19H18ClN3O4
387.823000
PZGSQKASGVWEDK-PPLBCVRQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM584252; PubChem:CID162505658
Local ready
Direct docking supported
E3L029286
BDB029286
BDBM585773
Cc1cc(C(=O)Nc2cccc([C@]3(Cc4nncn4C)C[C@@H](C#N)C3)c2)nc(C2CC2)n1
C24H25N7O
427.512000
AVHROJXYFUWPQG-BCTVQRCUSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585773
Local ready
Direct docking supported
E3L029287
BDB029287
BDBM585786
Cc1cc(C(=O)Nc2cccc([C@]3(Cc4nncn4C)C[C@H](C#N)C3)c2)nc(C2CC2)n1
C24H25N7O
427.512000
AVHROJXYFUWPQG-ONEIWYMKSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585786
Local ready
Direct docking supported
E3L029288
BDB029288
BDBM585788
Cn1cnnc1C[C@]1(c2cccc(N3Cc4c(cccc4C(F)(F)F)C3=O)c2)C[C@H](C#N)C1
C24H20F3N5O
451.452000
IRYIWQSUGCWZFS-CWSKOGRWSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585788
Local ready
Direct docking supported
E3L029289
BDB029289
BDBM585789
Cn1cnnc1C[C@]1(c2cccc(N3Cc4c(cc(CN5CCC6(CC6)C5)cc4C(F)(F)F)C3=O)c2)C[C@H](C#N)C1
C31H31F3N6O
560.624000
BRRXAIQELJKDCC-RYECUYIGSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585789
Local ready
Direct docking supported
E3L029290
BDB029290
BDBM585790
CCC1CN(Cc2cc3c(c(C(F)(F)F)c2)CN(c2cccc([C@]4(Cc5nncn5C)C[C@@H](C#N)C4)c2)C3=O)CCCO1
C32H35F3N6O2
592.666000
ZTYPHHAXRXVFCW-CZMMVBKASA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585790
Local ready
Direct docking supported
E3L029291
BDB029291
BDBM585791
C[C@@H]1CN(Cc2cc3c(c(C(F)(F)F)c2)CN(c2cccc([C@]4(Cc5nncn5C)C[C@@H](C#N)C4)c2)C3=O)CCO1
C30H31F3N6O2
564.612000
TYPNQYBPYKTZQL-DOJXGVHPSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585791
Local ready
Direct docking supported
E3L029292
BDB029292
BDBM585792
C[C@@H]1CN(Cc2cc3c(c(C(F)(F)F)c2)CN(c2cccc([C@]4(Cc5nncn5C)C[C@@](C)(C#N)C4)c2)C3=O)CCO1
C31H33F3N6O2
578.639000
VIYUQXRPBWMFRZ-FQOCFFJISA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585792
Local ready
Direct docking supported
E3L029293
BDB029293
BDBM585793
Cc1cc(C(=O)Nc2cccc([C@]3(Cc4nncn4C)C[C@@](C)(C#N)C3)c2)nc(C2CC2)n1
C25H27N7O
441.539000
WMCOEMPWXJRFMB-SOAUALDESA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585793
Local ready
Direct docking supported
E3L029294
BDB029294
BDBM585794
Cc1cc(C(=O)Nc2cccc([C@]3(Cc4nncn4C)C[C@](C)(C#N)C3)c2)nc(C2CC2)n1
C25H27N7O
441.539000
WMCOEMPWXJRFMB-PLQXJYEYSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585794
Local ready
Direct docking supported
E3L029295
BDB029295
BDBM585795
C[C@@H]1CN(Cc2cc3c(c(C(F)(F)F)c2)CN(c2cccc([C@]4(Cc5nncn5C)C[C@](C)(C#N)C4)c2)C3=O)CCO1
C31H33F3N6O2
578.639000
VIYUQXRPBWMFRZ-HJHQTFHHSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585795
Local ready
Direct docking supported
E3L029296
BDB029296
BDBM585796
C[C@@H]1CN(Cc2cc3c(c(C(F)(F)F)c2)CN(c2cccc([C@]4(Cc5nncn5C)C[C@@H](C#N)C4)c2)C3=O)CCC1(F)F
C31H31F5N6O
598.620000
CHJJASJWFRCRQD-DOJXGVHPSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585796
Local ready
Direct docking supported
E3L029297
BDB029297
BDBM585797
Cn1cnnc1C[C@]1(c2cccc(N3Cc4c(cc(CNC5CC6C(C5)C6(F)F)cc4C(F)(F)F)C3=O)c2)C[C@H](C#N)C1
C31H29F5N6O
596.604000
IHKKIDILCUXTDQ-UQLKZTIISA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585797
Local ready
Direct docking supported
E3L029298
BDB029298
BDBM585798
CC1CCCN(Cc2cc3c(c(C(F)(F)F)c2)CN(c2cccc([C@]4(Cc5nncn5C)C[C@@H](C#N)C4)c2)C3=O)CC1
C32H35F3N6O
576.667000
WRWBXQMNSPBQNV-AVCJDWODSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585798
Local ready
Direct docking supported
E3L029299
BDB029299
BDBM585799
Cn1cnnc1C[C@]1(c2cccc(N3Cc4c(cc(CN5CCC[C@H](C(F)(F)F)C5)cc4C(F)(F)F)C3=O)c2)C[C@H](C#N)C1
C31H30F6N6O
616.610000
YGLPIRUNHRZFLN-GOGYHYQUSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585799
Local ready
Direct docking supported
E3L029300
BDB029300
BDBM585800
C[C@@H]1CN(Cc2cc3c(c(C(F)(F)F)c2)CN(c2cccc([C@]4(Cc5nncn5C)C[C@@H](C#N)C4)c2)C3=O)C[C@H](C)O1
C31H33F3N6O2
578.639000
JYAMUOCSQXLCDG-YOPDCPDTSA-N Q13191 E3 ubiquitin-protein ligase CBL-B
BindingDB
BindingDB:BDBM585800
Local ready
Direct docking supported