E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L029241
BDB029241
BDBM582467
C[C@H]1CN(C)CCN1c1cc(NC(=O)Cn2cc(-c3cc(F)c(O)c(C(N)=O)c3)c3c(=O)n(CC#Cc4cnn(C)c4)cnc32)c(Cl)cn1
C33H32ClFN10O4
687.136000
DBMKUZQSKCMYNM-IBGZPJMESA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM582467
Local ready
Direct docking supported
E3L029242
BDB029242
BDBM582468
Cn1cnc2c(c(-c3cc(C(N)=O)c(O)c(F)c3F)cn2CC(=O)Nc2cc(NCCCO)nc(F)c2Cl)c1=O
C24H21ClF3N7O5
579.923000
GQLBEENRLBHERD-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM582468; PubChem:CID139391076
Local ready
Direct docking supported
E3L029243
BDB029243
BDBM582469
CN1CC2(CCN(c3cc(NC(=O)Cn4cc(-c5cc(Cl)c(O)c(C(N)=O)c5)c5c(=O)n(C)cnc54)c(Cl)cn3)C2)C1
C28H28Cl2N8O4
611.490000
QFHPLSPIRBXYOO-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM582469
Local ready
Direct docking supported
E3L029244
BDB029244
BDBM582470
CN1CC2(CCN(c3cc(NC(=O)Cn4cc(-c5cc(C(N)=O)c(O)c(F)c5F)c5c(=O)n(C)cnc54)c(Cl)cn3)C2)C1
C28H27ClF2N8O4
613.025000
VPGJIYUNPDRFRW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM582470
Local ready
Direct docking supported
E3L029245
BDB029245
BDBM582471
CN1CC2(CCN(c3cc(NC(=O)Cn4cc(-c5cc(F)c(O)c(C(N)=O)c5)c5c(=O)n(C)cnc54)c(Cl)cn3)C2)C1
C28H28ClFN8O4
595.035000
ZJFUBGFURVDMQX-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM582471
Local ready
Direct docking supported
E3L029246
BDB029246
BDBM582472
CN1CCC2(C1)CN(c1cc(NC(=O)Cn3cc(-c4cc(C(N)=O)c(O)c(F)c4F)c4c(=O)n(C)cnc43)c(Cl)cn1)C2
C28H27ClF2N8O4
613.025000
LVMMEZLLRFCSPR-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM582472
Local ready
Direct docking supported
E3L029247
BDB029247
BDBM582473
CN1CCC2(C1)CN(c1cc(NC(=O)Cn3cc(-c4cc(F)c(O)c(C(N)=O)c4)c4c(=O)n(C)cnc43)c(Cl)cn1)C2
C28H28ClFN8O4
595.035000
DHXJDOMFMRZFAB-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM582473
Local ready
Direct docking supported
E3L029248
BDB029248
BDBM582474
C[C@H]1CN(C)C[C@H](C)N1c1cc(NC(=O)Cn2cc(-c3cc(C(N)=O)c(O)c(F)c3F)c3c(=O)n(C)cnc32)c(Cl)c(F)n1
C28H28ClF3N8O4
633.031000
GZGSYBIHSWWGTH-STQMWFEESA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM582474
Local ready
Direct docking supported
E3L029249
BDB029249
BDBM582475
Cn1cnc2c(c(-c3cc(C(N)=O)c(O)c(F)c3F)cn2CC(=O)Nc2cc(N3CCC3)nc(F)c2Cl)c1=O
C24H19ClF3N7O4
561.908000
FEZHAKSPPQJONN-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM582475; PubChem:CID139405398
Local ready
Direct docking supported
E3L029250
BDB029250
US11518767, Example 3
CC(C)CC1CN(c2ccc3oc(N)nc3c2)c2c(N)ncnc21
C17H20N6O
324.388000
UUWNQXUHQXRBNH-UHFFFAOYSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM582478; PubChem:CID142608609
Local ready
Direct docking supported
E3L029251
BDB029251
US11518767, Example 4
CSCC1(C)CN(c2ccc3oc(N)nc3c2)c2c(N)ncnc21
C16H18N6OS
342.428000
YZESSOQLEODPGP-UHFFFAOYSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM582479; PubChem:CID142608603
Local ready
Direct docking supported
E3L029252
BDB029252
BDBM582720
Nc1cc(Cl)cnc1N1CCN(C(=O)CC(=O)O)CC1c1ccc(Cl)cc1
C18H18Cl2N4O3
409.273000
ADAMHDOPUYAGDE-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM582720; PubChem:CID166034034
Local ready
Direct docking supported
E3L029253
BDB029253
BDBM582878
Nc1cc(Cl)cnc1N1CCN(C(=O)C2C[C@@H]2C(=O)O)CC1c1ccc(Cl)cc1
C20H20Cl2N4O3
435.311000
UJEBKBZZUZSGCC-CKDBGZEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM582878; PubChem:CID166638729
Local ready
Direct docking supported
E3L029254
BDB029254
BDBM582884
CC(C)C[C@H]1CN(C(=O)CC(=O)O)C[C@@H](c2ccc(Cl)cc2)N1c1ncc(Cl)cc1N
C22H26Cl2N4O3
465.381000
BCURZNRLBFGNAN-HKUYNNGSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM582884; PubChem:CID166034001
Local ready
Direct docking supported
E3L029255
BDB029255
US11524962, Example 1
C[C@@](O)(c1ccc2c(c1)CC2)[C@H]1O[C@@H](n2ccc3c(N)ncnc32)[C@H](O)[C@@H]1O
C20H22N4O4
382.420000
SVJLKRXTYXVBPP-HRYJEPKJSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM584221; PubChem:CID142574969
Local ready
Direct docking supported
E3L029256
BDB029256
US11524962, Example 2
Nc1ncnc2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc3c(c2)CC3)[C@@H](O)[C@H]1O
C19H20N4O4
368.393000
PIERCIOPKDBMLC-PPLBCVRQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM584222; PubChem:CID142574974
Local ready
Direct docking supported
E3L029257
BDB029257
US11524962, Example 6
Nc1ncnc2c1c(F)cn2[C@@H]1O[C@H]([C@H](O)c2ccc3c(c2)CC3)[C@@H](O)[C@H]1O
C19H19FN4O4
386.383000
FJWSDBIMYNCUBC-PPLBCVRQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM584223; PubChem:CID142575008
Local ready
Direct docking supported
E3L029258
BDB029258
US11524962, Example 9
Cc1ncnc2c1ccn2[C@@H]1O[C@H]([C@](C)(O)c2ccc3c(c2)CC3)[C@@H](O)[C@H]1O
C21H23N3O4
381.432000
AVJDKCLSVKCKCR-ARXXEPJESA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM584224; PubChem:CID162505648
Local ready
Direct docking supported
E3L029259
BDB029259
US11524962, Example 11
Cc1ncnc2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc3c(c2)CC3)[C@@H](O)[C@H]1O
C20H21N3O4
367.405000
GIVBMSCEMGCGQJ-KWXDATOUSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM584225; PubChem:CID142575022
Local ready
Direct docking supported
E3L029260
BDB029260
US11524962, Example 14
Nc1ncnc2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc3c(c2)OCC3)[C@@H](O)[C@H]1O
C19H20N4O5
384.392000
ROBDUKXVDWAJJB-PPLBCVRQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM584226; PubChem:CID142574942
Local ready
Direct docking supported