E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L031621
BDB031621
BDBM631133
CN(C(=O)N1CCc2ccccc21)[C@@H]1CCC(=O)NC1=O
C15H17N3O3
287.319000
QNKWDLBTSYDRHK-GFCCVEGCSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631133; PubChem:CID151615611
Local ready
Direct docking supported
E3L031622
BDB031622
US11802131, Example 61
O=C1CC[C@H](NC(=O)Cc2cccnc2)C(=O)N1
C12H13N3O3
247.254000
JGMCYGUIFQEYNM-VIFPVBQESA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631134; PubChem:CID137533626
Local ready
Direct docking supported
E3L031623
BDB031623
US11802131, Example 62
CN(C(=O)N1CCc2cccnc21)C1CCC(=O)NC1=O
C14H16N4O3
288.307000
YCOBKVMLPJTNOT-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631135; PubChem:CID137526760
Local ready
Direct docking supported
E3L031624
BDB031624
US11802131, Example 63
O=C1CC[C@@H](NC(=O)Cc2cccnc2)C(=O)N1
C12H13N3O3
247.254000
JGMCYGUIFQEYNM-SECBINFHSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631136; PubChem:CID137533637
Local ready
Direct docking supported
E3L031625
BDB031625
US11802131, Example 64
O=C1CC[C@@H](NC(=O)N2CCCc3cccnc32)C(=O)N1
C14H16N4O3
288.307000
JNFKCVUMZWHHQP-SNVBAGLBSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631137; PubChem:CID154591723
Local ready
Direct docking supported
E3L031626
BDB031626
US11802131, Example 65
CC(=O)Nc1ccc(CC(=O)N[C@H]2CCC(=O)NC2=O)cc1
C15H17N3O4
303.318000
RYWJERYZHMTVLN-LBPRGKRZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631138; PubChem:CID137533628
Local ready
Direct docking supported
E3L031627
BDB031627
US11802131, Example 66
CC(=O)Nc1ccc(CC(=O)N[C@@H]2CCC(=O)NC2=O)cc1
C15H17N3O4
303.318000
RYWJERYZHMTVLN-GFCCVEGCSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631139; PubChem:CID137533659
Local ready
Direct docking supported
E3L031628
BDB031628
US11802131, Example 67
CC(=O)Nc1cccc(CC(=O)N[C@@H]2CCC(=O)NC2=O)c1
C15H17N3O4
303.318000
KNOXBHGZJRRGEG-GFCCVEGCSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631140; PubChem:CID137533631
Local ready
Direct docking supported
E3L031629
BDB031629
US11802131, Example 68
CC(=O)Nc1cccc(CC(=O)N[C@H]2CCC(=O)NC2=O)c1
C15H17N3O4
303.318000
KNOXBHGZJRRGEG-LBPRGKRZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631141; PubChem:CID137533594
Local ready
Direct docking supported
E3L031630
BDB031630
US11802131, Example 69
O=C1CC[C@H](NC(=O)Cc2ccc3c(c2)CC(=O)N3)C(=O)N1
C15H15N3O4
301.302000
MIWPDHSPCQNWKP-NSHDSACASA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631142; PubChem:CID137533609
Local ready
Direct docking supported
E3L031631
BDB031631
US11802131, Example 70
O=C1CC[C@@H](NC(=O)Cc2ccc3c(c2)CC(=O)N3)C(=O)N1
C15H15N3O4
301.302000
MIWPDHSPCQNWKP-LLVKDONJSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631143; PubChem:CID154591725
Local ready
Direct docking supported
E3L031632
BDB031632
US11802131, Example 71
Cn1nc(C(=O)N[C@H]2CCC(=O)NC2=O)c2c1CCN(C(=O)OC(C)(C)C)C2
C18H25N5O5
391.428000
JROFNEPHRJSWLC-NSHDSACASA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631144; PubChem:CID150729569
Local ready
Direct docking supported
E3L031633
BDB031633
BDBM631145
Cn1nc(C(=O)N[C@H]2CCC(=O)NC2=O)c2c1CCNC2
C13H17N5O3
291.311000
HBTFWBKPBZUTOJ-QMMMGPOBSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631145; PubChem:CID150391238
Local ready
Direct docking supported
E3L031634
BDB031634
US11802131, Example 73
CN1C(=O)CCC(NC(=O)[C@H]2CCCc3ccccc32)C1=O
C17H20N2O3
300.358000
HQDMUGFDSMUBCS-LSLKUGRBSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631146; PubChem:CID137533650
Local ready
Direct docking supported
E3L031635
BDB031635
US11802131, Example 73
CN1C(=O)CCC(NC(=O)[C@H]2CCCc3ccccc32)C1=O
C17H20N2O3
300.358000
HQDMUGFDSMUBCS-LSLKUGRBSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631148; PubChem:CID137533650
Local ready
Direct docking supported
E3L031636
BDB031636
US11802131, Example A
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCC(=O)N1CC[C@H](C(=O)N[C@H]3CCC(=O)NC3=O)c3ccccc31)c1nnc(C)n1-2
C40H43ClN8O5S
783.355000
UXEKZSACSSTXNV-DTXPUJKBSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631149; PubChem:CID142535905
Local ready
Direct docking supported
E3L031637
BDB031637
US11802131, Example B
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCC(=O)N1CC[C@H](C(=O)N[C@@H]3CCC(=O)NC3=O)c3ccccc31)c1nnc(C)n1-2
C40H43ClN8O5S
783.355000
UXEKZSACSSTXNV-JBOQNHBVSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631150; PubChem:CID154591727
Local ready
Direct docking supported
E3L031638
BDB031638
US11802131, Example C
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCOCCOCCOCC(=O)N1CC[C@@H](C(=O)N[C@H]3CCC(=O)NC3=O)c3ccccc31)c1nnc(C)n1-2
C42H47ClN8O8S
859.406000
OYPYVJUTCQQGQG-RTOKGZNSSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM631151; PubChem:CID154591735
Local ready
Direct docking supported
E3L031639
BDB031639
BDBM633215
CNC(=O)c1ccc(N2CCN(Cc3cc(F)c4c5c(c(=O)[nH]c4c3)CCO5)CC2)c(F)n1
C23H23F2N5O3
455.465000
JPJCBEDCLSAAGQ-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB
BindingDB:BDBM633215
Local ready
Direct docking supported
E3L031640
BDB031640
BDBM633216
CNC(=O)c1ccc(N2CCN(Cc3cc(F)c4c5c(c(=O)[nH]c4c3)CCC5)CC2)c(F)n1
C24H25F2N5O2
453.493000
CPBLDVOTAWHPHS-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM633216; PubChem:CID168982808
Local ready
Direct docking supported