E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L034681
BDB034681
US12110286, Example 2c
COC(=O)C(C)CCn1c(=O)n(C)c2ccc(Nc3cc(C(=O)OC(C)C)nc(Cl)c3C#N)cc21
C24H26ClN5O5
499.955000
PHZHIMGSZQRPDT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699511; PubChem:CID135386070
Local ready
Direct docking supported
E3L034682
BDB034682
US12110286, Example 2d
CCOC(=O)c1cc(Nc2ccc3c(c2)n(CC[C@@H](C)O)c(=O)n3C)c(C#N)c(Cl)n1
C21H22ClN5O4
443.891000
JIKZITVQXIJWBT-GFCCVEGCSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699512; PubChem:CID142478607
Local ready
Direct docking supported
E3L034683
BDB034683
US12110286, Example 3a
COC(=O)C(C)CCn1c(=O)n(C)c2ccc(Nc3cc(C(=O)O)nc(Cl)c3C#N)cc21
C21H20ClN5O5
457.874000
CLTRSZOLICYTEV-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699513; PubChem:CID135386917
Local ready
Direct docking supported
E3L034684
BDB034684
US12110286, Example 3b
COC(=O)C(C)Cn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21
C19H18ClN5O3
399.838000
FLHVMCPAZHFFKW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699514; PubChem:CID135386078
Local ready
Direct docking supported
E3L034685
BDB034685
US12110286, Example 3c
COC(=O)C(C)CCn1c(=O)n(C)c2ccc(Nc3nc(C)ncc3Cl)cc21
C19H22ClN5O3
403.870000
FFBIVPPDNHCCGW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699515; PubChem:CID135386982
Local ready
Direct docking supported
E3L034686
BDB034686
US12110286, Example 4
CNC(=O)c1cc(Nc2ccc3c(c2)n(CC[C@@H](C)O)c(=O)n3C)c(C#N)c(Cl)n1
C20H21ClN6O3
428.880000
WLWFQADZMYXXAK-LLVKDONJSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699516; PubChem:CID142478737
Local ready
Direct docking supported
E3L034687
BDB034687
US12110286, Example 5
COC(=O)C(C)CCn1c(=O)n(C)c2ccc(Nc3cc(-c4nc(C)no4)nc(Cl)c3C#N)cc21
C23H22ClN7O4
495.927000
VSQLRDIEXXEMOX-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699517; PubChem:CID135386048
Local ready
Direct docking supported
E3L034688
BDB034688
US12110286, Example 6
COC(=O)[C@@H](N)CCn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21
C19H19ClN6O3
414.853000
SXPSIJXVPPPZQU-ZDUSSCGKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699518; PubChem:CID142478616
Local ready
Direct docking supported
E3L034689
BDB034689
US12110286, Example 7a
CNC(=O)c1cc(Nc2ccc3c(c2)n(CCC(C)C(=O)OC)c(=O)n3C)c(C#N)c(Cl)n1
C22H23ClN6O4
470.917000
GFZGYEPLSQZLGU-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699519; PubChem:CID135386373
Local ready
Direct docking supported
E3L034690
BDB034690
US12110286, Example 7b
C#CCCNC(=O)c1cc(Nc2ccc3c(c2)n(CCC(C)C(=O)OC)c(=O)n3C)c(C#N)c(Cl)n1
C25H25ClN6O4
508.966000
XLCSGOHTKYWAFK-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699520; PubChem:CID135386052
Local ready
Direct docking supported
E3L034691
BDB034691
US12110286, Example 7c
COC(=O)C(C)CCn1c(=O)n(C)c2ccc(Nc3cc(C(=O)N(C)C)nc(Cl)c3C#N)cc21
C23H25ClN6O4
484.944000
OYRJEIIQQAPCFL-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699521; PubChem:CID135386739
Local ready
Direct docking supported
E3L034692
BDB034692
US12110286, Example 7d
CN(C)CCNC(=O)c1cc(Nc2ccc3c(c2)n(C)c(=O)n3C)c(C#N)c(Cl)n1
C20H22ClN7O2
427.896000
GASXNGUJPPDXOG-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699522; PubChem:CID135386077
Local ready
Direct docking supported
E3L034693
BDB034693
US12110286, Example 8
CCOC(=O)c1cc(Nc2ccc3c(c2)n(CCC(C)C(=O)OC)c(=O)n3C)n2nccc2n1
C23H26N6O5
466.498000
VVKJZIMMMJSIAS-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699523; PubChem:CID135385840
Local ready
Direct docking supported
E3L034694
BDB034694
US12110286, Example 9
COC(=O)C(O)CCn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21
C19H18ClN5O4
415.837000
NIECOSLPFJLJPT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699524; PubChem:CID135386142
Local ready
Direct docking supported
E3L034695
BDB034695
US12110286, Example 10a
Cn1c(=O)n(CC(O)C(C)(C)O)c2cc(Nc3ccnc(Cl)c3C#N)ccc21
C19H20ClN5O3
401.854000
JPKCBHQGXJNBHW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699525; PubChem:CID135385941
Local ready
Direct docking supported
E3L034696
BDB034696
US12110286, Example 10b
COC(=O)C(CCn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21)OC
C20H20ClN5O4
429.864000
NZUNVKSAXRXEGG-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699526; PubChem:CID135386951
Local ready
Direct docking supported
E3L034697
BDB034697
US12110286, Example 10c
CCOC(CCn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21)C(=O)OC
C21H22ClN5O4
443.891000
ZNKVRRNARDKVCA-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699527; PubChem:CID135386014
Local ready
Direct docking supported
E3L034698
BDB034698
US12110286, Example 10d
COC(=O)CCCn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21
C19H18ClN5O3
399.838000
LTBNRGAJZWSLPN-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699528; PubChem:CID135386197
Local ready
Direct docking supported
E3L034699
BDB034699
US12110286, Example 10e
COC(=O)C(CCn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21)OCC1CC1
C23H24ClN5O4
469.929000
BMFRRZSCPYSCBS-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699529; PubChem:CID135386973
Local ready
Direct docking supported
E3L034700
BDB034700
US12110286, Example 10f
Cn1c(=O)n(CC(O)Cn2cccn2)c2cc(Nc3ccnc(Cl)c3C#N)ccc21
C20H18ClN7O2
423.864000
ZZMBFCYXPCQOHY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699530; PubChem:CID135386037
Local ready
Direct docking supported