E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L034701
BDB034701
US12110286, Example 11
COC(=O)C1CCCC1Cn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21
C22H22ClN5O3
439.903000
VXFMQZRHDAUUNQ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699533; PubChem:CID135386069
Local ready
Direct docking supported
E3L034702
BDB034702
US12110286, Example 12
COC(=O)[C@H](N)CCn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21
C19H19ClN6O3
414.853000
SXPSIJXVPPPZQU-CYBMUJFWSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699534; PubChem:CID151925266
Local ready
Direct docking supported
E3L034703
BDB034703
US12110286, Example 13
CC(=O)NC(C)CCn1c(=O)n(C)c2ccc(Nc3ccnc(Cl)c3C#N)cc21
C20H21ClN6O2
412.881000
RRWQXPURICEHLU-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699535; PubChem:CID135387174
Local ready
Direct docking supported
E3L034704
BDB034704
US12110286, Example 14
CCNC(=O)c1cc(Nc2ccc3c(c2)n(CCC(C)(C)O)c(=O)n3C)c(Cl)cn1
C21H26ClN5O3
431.924000
NYIRTRQYRZUIHP-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699536; PubChem:CID142478598
Local ready
Direct docking supported
E3L034705
BDB034705
US12110286, Example 15b
CCOC(=O)c1cnn(-c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)c1
C23H26ClN7O4
499.959000
LMLUQINDXFITME-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699540; PubChem:CID142478599
Local ready
Direct docking supported
E3L034706
BDB034706
US12110286, Example 15c
CCOC(=O)c1c(C)nn(-c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)c1C
C25H30ClN7O4
528.013000
CUIKYQWUOYPZNZ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699541; PubChem:CID142478674
Local ready
Direct docking supported
E3L034707
BDB034707
US12110286, Example 15d
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(-n4ccc(C(F)(F)F)n4)ncc3Cl)ccc21
C21H21ClF3N7O2
495.893000
POYRBUMOPMMSRV-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699542; PubChem:CID142478605
Local ready
Direct docking supported
E3L034708
BDB034708
US12110286, Example 15e
Cc1cc(C)n(-c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(O)CCO)c(=O)n4C)n2)n1
C23H28ClN7O3
485.976000
PMAJBKAAGUYBNQ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699543; PubChem:CID135386946
Local ready
Direct docking supported
E3L034709
BDB034709
US12110286, Example 15f
CCC(C)(O)CCn1c(=O)n(C)c2ccc(Nc3nc(-n4nc(C)cc4C)ncc3Cl)cc21
C23H28ClN7O2
469.977000
NLCINRRSFNMDBS-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699544; PubChem:CID135386407
Local ready
Direct docking supported
E3L034710
BDB034710
US12110286, Example 15h
Cc1cc(C)n(-c2ncc(Cl)c(Nc3ccc4c(c3)[nH]c(=O)n4C)n2)n1
C17H16ClN7O
369.816000
OUUODDWRICYRJZ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699546; PubChem:CID135386193
Local ready
Direct docking supported
E3L034711
BDB034711
US12110286, Example 15i
COCC(C)(O)CCn1c(=O)n(C)c2ccc(Nc3nc(N4CCC(C(=O)N(C)C)CC4)ncc3Cl)cc21
C26H36ClN7O4
546.072000
DNOBPELXHLHNRN-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699547; PubChem:CID142478606
Local ready
Direct docking supported
E3L034712
BDB034712
US12110286, Example 15j
COCC(C)(O)CCn1c(=O)n(C)c2ccc(Nc3nc(-n4nc(C)cc4C)ncc3Cl)cc21
C23H28ClN7O3
485.976000
DSBDPTYPXCJQAH-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699548; PubChem:CID135386930
Local ready
Direct docking supported
E3L034713
BDB034713
US12110286, Example 15k
CN(C)C(=O)C1CCN(c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(O)CCO)c(=O)n4C)n2)CC1
C26H36ClN7O4
546.072000
KCSXEDJSVLQXNQ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699549; PubChem:CID135386356
Local ready
Direct docking supported
E3L034714
BDB034714
US12110286, Example 15l
CCC(C)(O)CCn1c(=O)n(C)c2ccc(Nc3nc(N4CCC(C(=O)N(C)C)CC4)ncc3Cl)cc21
C26H36ClN7O3
530.073000
PUDWGKGGOFACEY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699550; PubChem:CID135386053
Local ready
Direct docking supported
E3L034715
BDB034715
US12110286, Example 15n
Cc1nn(-c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)c(C)c1Cl
C22H25Cl2N7O2
490.395000
INCFFKSLYBNHNF-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699552; PubChem:CID142478654
Local ready
Direct docking supported
E3L034716
BDB034716
US12110286, Example 15o
Cc1cc(C)n(-c2cc(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)c(C#N)cn2)n1
C24H27N7O2
445.527000
YWNLNWIFIPBFMX-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699553; PubChem:CID135386956
Local ready
Direct docking supported
E3L034717
BDB034717
US12110286, Example 15p
Cc1cc(C)n(-c2nc(C)c(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)n1
C23H28ClN7O2
469.977000
XPJBGZOKQWBLEL-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699554; PubChem:CID135386370
Local ready
Direct docking supported
E3L034718
BDB034718
US12110286, Example 15q
Cc1cc(C)n(-c2ncc(Br)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)n1
C22H26BrN7O2
500.401000
NKDNBQBRUJLKCV-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699555; PubChem:CID142478629
Local ready
Direct docking supported
E3L034719
BDB034719
US12110286, Example 17a
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(-c4[nH]cc5ccccc45)ncc3Cl)ccc21
C25H25ClN6O2
476.968000
PCTBVTMKGPSZGC-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699558; PubChem:CID172675535
Local ready
Direct docking supported
E3L034720
BDB034720
US12110286, Example 17b
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(-n4ncc5ccccc54)ncc3Cl)ccc21
C24H24ClN7O2
477.956000
DJRUBEZUGCYIFM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM699559; PubChem:CID135385977
Local ready
Direct docking supported