E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L036721
BDB036721
BDBM731412
C=CC(=O)Nc1cccc2c(Nc3n[nH]c4c3CN(C(=O)N[C@H](CN(C)C)C3CCOCC3)C4(C)C)nccc12
C29H38N8O3
546.676000
JUKCURHWYOQWCF-HSZRJFAPSA-N P51948 Cyclin-H
BindingDB
BindingDB:BDBM731412
Local ready
Direct docking supported
E3L036722
BDB036722
BDBM731413
C=CC(=O)Nc1ccc(Nc2n[nH]c3c2CN(C(=O)N[C@H](CN(C)C)C2CCOCC2)C3(C)C)nc1
C25H36N8O3
496.616000
BSVWKKBUSXXCEI-LJQANCHMSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM731413; PubChem:CID153631906
Local ready
Direct docking supported
E3L036723
BDB036723
BDBM731414
C=CC(=O)Nc1ccc(C(=O)Nc2n[nH]c3c2CN(C(=O)N[C@H](CN(C)C)C2CCOCC2)C3(C)C)cc1
C27H37N7O4
523.638000
WDSSIYQCPVYHCK-OAQYLSRUSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM731414; PubChem:CID153631917
Local ready
Direct docking supported
E3L036724
BDB036724
BDBM731415
C=CC(=O)Nc1cnc(Nc2n[nH]c3c2CN(C(=O)N[C@H](CN(C)C)C2CCOCC2)C3(C)C)nc1
C24H35N9O3
497.604000
OWIAHZQKKDKSPW-GOSISDBHSA-N P51948 Cyclin-H
BindingDB
BindingDB:BDBM731415
Local ready
Direct docking supported
E3L036725
BDB036725
BDBM731416
C=CC(=O)Nc1ccc(C(=O)Nc2n[nH]c3c2CN(C(=O)NC2CN(C)Cc4ccccc42)C3(C)C)cc1
C28H31N7O3
513.602000
HUSCDVQJPZERFH-UHFFFAOYSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM731416; PubChem:CID153631866
Local ready
Direct docking supported
E3L036726
BDB036726
BDBM731417
Cc1nccc(Nc2n[nH]c3c2CN(C(=O)N[C@H](CN(C)C)C2CCOCC2)C3(C)C)n1
C22H34N8O2
442.568000
ZGVDKJQGDZCRMV-QGZVFWFLSA-N P51948 Cyclin-H
BindingDB
BindingDB:BDBM731417
Local ready
Direct docking supported
E3L036727
BDB036727
BDBM731418
C=CC(=O)Nc1ccc(Nc2n[nH]c3c2CN(C(=O)N[C@H](CN(C)C)C2CCOCC2)C3(C)C)cc1
C26H37N7O3
495.628000
WOCNOOCOZFSURY-OAQYLSRUSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM731418; PubChem:CID153631863
Local ready
Direct docking supported
E3L036728
BDB036728
BDBM731419
C=CC(=O)Nc1ccc(C(=O)Nc2n[nH]c3c2CN(C(=O)N[C@H]2CCCN(C)C2)C3(C)C)cc1
C24H31N7O3
465.558000
LKHUEPLQVFISLZ-KRWDZBQOSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM731419; PubChem:CID153631905
Local ready
Direct docking supported
E3L036729
BDB036729
BDBM731420
C=CC(=O)Nc1ccc(C(=O)Nc2n[nH]c3c2CN(C(=O)NC2(CN(C)C)CC2)C3(C)C)cc1
C24H31N7O3
465.558000
RXRUNKOMYBBTKW-UHFFFAOYSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM731420; PubChem:CID153631892
Local ready
Direct docking supported
E3L036730
BDB036730
BDBM731421
C=CC(=O)Nc1ccc(C(=O)Nc2n[nH]c3c2CN(C(=O)NC(CN(C)C)C2CCOC2)C3(C)C)cc1
C26H35N7O4
509.611000
QQSZYNLBBPVWLA-UHFFFAOYSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM731421; PubChem:CID153631868
Local ready
Direct docking supported
E3L036731
BDB036731
US12269819, Example 9
CO[C@@H]1[C@@H](n2cc(-c3cc(F)c(F)c(F)c3)nn2)[C@@H](O)[C@@H](CO)O[C@H]1C(=O)N(C)c1cccc(Cl)c1
C23H22ClF3N4O5
526.899000
HBSAWWHENHQAKC-WHCFWRGISA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731595; PubChem:CID155201738
Local ready
Direct docking supported
E3L036732
BDB036732
US12269819, Example 10
CO[C@@H]1[C@@H](n2cc(-c3cc(F)c(F)c(F)c3)nn2)[C@@H](O)[C@@H](CO)O[C@H]1C(=O)N(C)c1cc(Cl)ccc1Cl
C23H21Cl2F3N4O5
561.344000
YMWBDKDFECSUGJ-WHCFWRGISA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731597; PubChem:CID164767588
Local ready
Direct docking supported
E3L036733
BDB036733
US12269819, Example 11
CO[C@@H]1[C@@H](n2cc(-c3cc(F)c(F)c(F)c3)nn2)[C@@H](O)[C@@H](CO)O[C@H]1C(=O)N(C)c1cc(Cl)cc(Cl)c1
C23H21Cl2F3N4O5
561.344000
OXCZDDZQMYRTDI-WHCFWRGISA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731599; PubChem:CID164767589
Local ready
Direct docking supported
E3L036734
BDB036734
US12269819, Example 13
CO[C@@H]1[C@@H](n2cc(-c3cc(F)c(F)c(F)c3)nn2)[C@@H](O)[C@@H](CO)O[C@H]1C(=O)N(C)c1cccc2cc(Cl)cnc12
C26H23ClF3N5O5
577.947000
CLRVTBJMFJNCJC-MWJCSLLCSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731601; PubChem:CID164767579
Local ready
Direct docking supported
E3L036735
BDB036735
US12269819, Example 14
CO[C@@H]1[C@@H](n2cc(-c3cc(F)c(F)c(F)c3)nn2)[C@@H](O)[C@@H](CO)O[C@H]1C(=O)N(C)c1cc(Cl)ccc1C(F)(F)F
C24H21ClF6N4O5
594.896000
HRRMYMJMBYNICO-WHCFWRGISA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731602; PubChem:CID164767582
Local ready
Direct docking supported
E3L036736
BDB036736
US12269819, Example 15
CO[C@@H]1[C@@H](n2cc(-c3cc(F)c(F)c(F)c3)nn2)[C@@H](O)[C@@H](CO)O[C@H]1C(=O)N(C)c1cc(Cl)cc2cnccc12
C26H23ClF3N5O5
577.947000
LWBBQVRAYGVDEK-HSQNVRHTSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731603; PubChem:CID164767562
Local ready
Direct docking supported
E3L036737
BDB036737
US12269819, Example 16
CO[C@@H]1[C@@H](n2cc(-c3ccc(Cl)c(F)c3)nn2)[C@@H](O)[C@@H](CO)O[C@H]1C(=O)N(C)c1ccc2ncsc2c1
C24H23ClFN5O5S
547.996000
ZRLASWDNXYEMSR-YDXQKAQTSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731604; PubChem:CID164767555
Local ready
Direct docking supported
E3L036738
BDB036738
US12269819, Example 17
CO[C@@H]1[C@@H](n2cc(-c3cc(F)c(Cl)c(F)c3)nn2)[C@@H](O)[C@@H](CO)O[C@H]1C(=O)Nc1ccc2ccsc2c1
C24H21ClF2N4O5S
550.971000
BAHHMVJSINZXCH-SUHOFRIBSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731605; PubChem:CID167063188
Local ready
Direct docking supported
E3L036739
BDB036739
US12269819, Example 19
CO[C@@H]1[C@@H](n2cc(-c3cc(F)c(Cl)c(F)c3)nn2)[C@@H](O)[C@@H](CO)O[C@H]1C(=O)N(c1ccc2ncsc2c1)C(C)C
C26H26ClF2N5O5S
594.040000
AQDMTKABXLVOFO-MWJCSLLCSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731607; PubChem:CID155201765
Local ready
Direct docking supported
E3L036740
BDB036740
US12269819, Example 22
CO[C@@H]1[C@@H](n2cc(-c3ccc(Br)c(F)c3)nn2)[C@@H](O)[C@@H](CO)O[C@H]1C(=O)N(C)c1ccc2ncsc2c1
C24H23BrFN5O5S
592.447000
LTXRUDXFIJFKCA-YDXQKAQTSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731610; PubChem:CID155201764
Local ready
Direct docking supported