E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L036761
BDB036761
US12269819, Example B2
CN(CCN(C)c1ccc(O)cc1)C(=O)[C@@H]1O[C@H](CO)[C@H](O)[C@H](n2cc(-c3cccc(F)c3)nn2)[C@H]1O
C25H30FN5O6
515.542000
XQSYUPJOCAPBKD-OYTPZHDJSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731635; PubChem:CID155201801
Local ready
Direct docking supported
E3L036762
BDB036762
US12269819, Example B4
CN(CCNc1ccc(O)cc1)C(=O)[C@@H]1O[C@H](CO)[C@H](O)[C@H](n2cc(-c3cccc(F)c3)nn2)[C@H]1O
C24H28FN5O6
501.515000
SYQGGRPOLXDSCC-BMXMUORJSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731636; PubChem:CID155201810
Local ready
Direct docking supported
E3L036763
BDB036763
US12269819, Example B5
CN(CCNc1ccc(OCc2ccccc2)cc1)C(=O)[C@@H]1O[C@H](CO)[C@H](O)[C@H](n2cc(-c3cccc(F)c3)nn2)[C@H]1O
C31H34FN5O6
591.640000
BHLLKGQPVFBVOB-HBMYTODVSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731637; PubChem:CID155201804
Local ready
Direct docking supported
E3L036764
BDB036764
US12269819, Example B6
COc1ccc(NCCNC(=O)[C@@H]2O[C@H](CO)[C@H](O)[C@H](n3cc(-c4cccc(F)c4)nn3)[C@H]2O)cc1
C24H28FN5O6
501.515000
NJSUBMHCDVTUMY-BMXMUORJSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731638; PubChem:CID155201811
Local ready
Direct docking supported
E3L036765
BDB036765
US12269819, Example B7
COc1ccc(NCCN(C)C(=O)[C@@H]2O[C@H](CO)[C@H](O)[C@H](n3cc(-c4cccc(F)c4)nn3)[C@H]2O)cc1
C25H30FN5O6
515.542000
FFOAQHLPWTUDGE-OYTPZHDJSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731639; PubChem:CID155201805
Local ready
Direct docking supported
E3L036766
BDB036766
US12269819, Example B8
COc1ccc(N(C)CCN(C)C(=O)[C@@H]2O[C@H](CO)[C@H](O)[C@H](n3cc(-c4cccc(F)c4)nn3)[C@H]2O)cc1
C26H32FN5O6
529.569000
JCWKKVGMRQNNHN-ZLOLNMDISA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731640; PubChem:CID155201814
Local ready
Direct docking supported
E3L036767
BDB036767
US12269819, Example B8
COc1ccc(N(C)CCN(C)C(=O)[C@@H]2O[C@H](CO)[C@H](O)[C@H](n3cc(-c4cccc(F)c4)nn3)[C@H]2O)cc1
C26H32FN5O6
529.569000
JCWKKVGMRQNNHN-ZLOLNMDISA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731641; PubChem:CID155201814
Local ready
Direct docking supported
E3L036768
BDB036768
US12269819, Example B10
COc1ccccc1NCCNC(=O)[C@@H]1O[C@H](CO)[C@H](O)[C@H](n2cc(-c3cccc(F)c3)nn2)[C@H]1O
C24H28FN5O6
501.515000
KLXMSTAUDZATPM-BMXMUORJSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731642; PubChem:CID155201802
Local ready
Direct docking supported
E3L036769
BDB036769
US12269819, Example B11
CN(CCNC(=O)[C@@H]1O[C@H](CO)[C@H](O)[C@H](n2cc(-c3cccc(F)c3)nn2)[C@H]1O)c1ccc2c(c1)OCO2
C25H28FN5O7
529.525000
MPSWZPNSDVLWLS-OYTPZHDJSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731643; PubChem:CID155201812
Local ready
Direct docking supported
E3L036770
BDB036770
US12269819, Example B12
CN(CCN(C)c1ccc2c(c1)OCO2)C(=O)[C@@H]1O[C@H](CO)[C@H](O)[C@H](n2cc(-c3cccc(F)c3)nn2)[C@H]1O
C26H30FN5O7
543.552000
VMUPVZFSYWSELR-ZLOLNMDISA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731645; PubChem:CID155201807
Local ready
Direct docking supported
E3L036771
BDB036771
US12269819, Example B13
COc1ccccc1N(C)CCN(C)C(=O)[C@@H]1O[C@H](CO)[C@H](O)[C@H](n2cc(-c3cccc(F)c3)nn2)[C@H]1O
C26H32FN5O6
529.569000
VMGNSDKSELAXIG-ZLOLNMDISA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731646; PubChem:CID155201813
Local ready
Direct docking supported
E3L036772
BDB036772
US12269819, Example B14
COc1ccc(N(C)CCN(C)C(=O)[C@@H]2O[C@H](CO)[C@H](O)[C@H](n3cc(-c4cccc(F)c4)nn3)[C@H]2OC)cc1
C27H34FN5O6
543.596000
WNMNPERUKRESOJ-RSFKBIFASA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731648; PubChem:CID164767568
Local ready
Direct docking supported
E3L036773
BDB036773
US12269819, Example B15
COc1ccc(N(C)CCNC(=O)[C@@H]2O[C@H](CO)[C@H](O)[C@H](n3cc(-c4cccc(F)c4)nn3)[C@H]2OC)cc1
C26H32FN5O6
529.569000
HEBRCEBJEHHVNX-ZLOLNMDISA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731649; PubChem:CID167063201
Local ready
Direct docking supported
E3L036774
BDB036774
US12269819, Example B16
COc1ccc(NCCNC(=O)[C@@H]2O[C@H](CO)[C@H](O)[C@H](n3cc(-c4cccc(F)c4)nn3)[C@H]2OC)cc1
C25H30FN5O6
515.542000
BLTHQWFINROJJN-OYTPZHDJSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731650; PubChem:CID167063360
Local ready
Direct docking supported
E3L036775
BDB036775
US12269819, Example B17
COc1ccc(NCCNC(=O)[C@@H]2O[C@H](CO)[C@H](O)[C@H](n3cc(-c4cccc(F)c4)nn3)[C@H]2OC)cn1
C24H29FN6O6
516.530000
CPJMAXQDKNMYTC-YDXQKAQTSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731651; PubChem:CID155201752
Local ready
Direct docking supported
E3L036776
BDB036776
US12269819, Example B18
CO[C@@H]1[C@@H](n2cc(-c3cccc(F)c3)nn2)[C@@H](O)[C@@H](CO)O[C@H]1C(=O)N(C)CCN(C)c1ccc2c(cnn2C)c1
C28H34FN7O5
567.622000
XQPDZRNRZVBSGK-LXSUACKSSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731652; PubChem:CID155201746
Local ready
Direct docking supported
E3L036777
BDB036777
US12269819, Example B20
COc1ccc(NCCN(C)C(=O)C[C@@H]2O[C@H](CO)[C@H](O)[C@H](n3cc(-c4cccc(F)c4)nn3)[C@H]2O)cc1
C26H32FN5O6
529.569000
DWHKXMFHTDXKAL-AUOTXKHZSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731653; PubChem:CID155201795
Local ready
Direct docking supported
E3L036778
BDB036778
US12269819, Example B21
COc1ccc(N(C)CCN(C)C(=O)C[C@@H]2O[C@H](CO)[C@H](O)[C@H](n3cc(-c4cccc(F)c4)nn3)[C@H]2O)cc1
C27H34FN5O6
543.596000
IYLMPIYIYBGTKK-SZIGWMETSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731654; PubChem:CID155201794
Local ready
Direct docking supported
E3L036779
BDB036779
US12269819, Example B21
COc1ccc(N(C)CCN(C)C(=O)C[C@@H]2O[C@H](CO)[C@H](O)[C@H](n3cc(-c4cccc(F)c4)nn3)[C@H]2O)cc1
C27H34FN5O6
543.596000
IYLMPIYIYBGTKK-SZIGWMETSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731655; PubChem:CID155201794
Local ready
Direct docking supported
E3L036780
BDB036780
US12269819, Example B20
COc1ccc(NCCN(C)C(=O)C[C@@H]2O[C@H](CO)[C@H](O)[C@H](n3cc(-c4cccc(F)c4)nn3)[C@H]2O)cc1
C26H32FN5O6
529.569000
DWHKXMFHTDXKAL-AUOTXKHZSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM731656; PubChem:CID155201795
Local ready
Direct docking supported