E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L037041
BDB037041
BDBM733981
O=C1CCC(N2Cc3c(cccc3C3=CCNCC3)C2=O)C(=O)N1
C18H19N3O3
325.368000
RZXDAWDWELAICL-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733981; PubChem:CID132117753
Local ready
Direct docking supported
E3L037042
BDB037042
BDBM733982
CC(C)(C)OC(=O)N1CCC(O)(c2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)CC1
C23H29N3O6
443.500000
PHSYBDPKKQCNLH-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733982; PubChem:CID132117438
Local ready
Direct docking supported
E3L037043
BDB037043
BDBM733983
O=C1CCC(N2Cc3c(cccc3C3(O)CCNCC3)C2=O)C(=O)N1
C18H21N3O4
343.383000
CKTUBLFSOUAIBE-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733983; PubChem:CID132117836
Local ready
Direct docking supported
E3L037044
BDB037044
BDBM733984
O=C1CCC(N2Cc3c(NC4CCNCC4)cccc3C2=O)C(=O)N1
C18H22N4O3
342.399000
FCOXLQNVCSKGLX-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733984; PubChem:CID132001373
Local ready
Direct docking supported
E3L037045
BDB037045
BDBM733987
O=C1CCC(N2Cc3c(cccc3N3CCNCC3=O)C2=O)C(=O)N1
C17H18N4O4
342.355000
LQMPJZVJBYANFS-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733987; PubChem:CID132117527
Local ready
Direct docking supported
E3L037046
BDB037046
BDBM733988
O=C1CCC(N2Cc3c(ccnc3Cl)C2=O)C(=O)N1
C12H10ClN3O3
279.683000
HHROYGCPPBCPMP-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733988; PubChem:CID132117520
Local ready
Direct docking supported
E3L037047
BDB037047
BDBM733989
O=C1CCC(N2Cc3cc(Cl)ncc3C2=O)C(=O)N1
C12H10ClN3O3
279.683000
MSQLRLIBDVTJFB-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733989; PubChem:CID132118395
Local ready
Direct docking supported
E3L037048
BDB037048
BDBM733990
CC(C)(C)OC(=O)N1CCN(Cc2cc3c(cn2)C(=O)N(C2CCC(=O)NC2=O)C3)CC1
C22H29N5O5
443.504000
AXDIUGSTFWMKMD-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733990; PubChem:CID132118709
Local ready
Direct docking supported
E3L037049
BDB037049
BDBM733991
O=C1CCC(N2Cc3nc(Cl)ccc3C2=O)C(=O)N1
C12H10ClN3O3
279.683000
DHBLCYUMZORRJD-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733991; PubChem:CID132117718
Local ready
Direct docking supported
E3L037050
BDB037050
BDBM733992
CC(C)(C)OC(=O)N1CCN(Cc2ccc3c(n2)CN(C2CCC(=O)NC2=O)C3=O)CC1
C22H29N5O5
443.504000
QYSNVFFECGQYKK-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733992; PubChem:CID132118004
Local ready
Direct docking supported
E3L037051
BDB037051
BDBM733993
O=C1CCC(N2Cc3ccc(Cl)nc3C2=O)C(=O)N1
C12H10ClN3O3
279.683000
HEUQLFLPHHXPNU-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733993; PubChem:CID132117079
Local ready
Direct docking supported
E3L037052
BDB037052
BDBM733994
CC(C)(C)OC(=O)N1CCN(Cc2ccc3c(n2)C(=O)N(C2CCC(=O)NC2=O)C3)CC1
C22H29N5O5
443.504000
KWIBKVUZVDGUFC-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733994; PubChem:CID132117220
Local ready
Direct docking supported
E3L037053
BDB037053
BDBM733995
O=C1CCC(N2Cc3cnc(Cl)nc3C2=O)C(=O)N1
C11H9ClN4O3
280.671000
GANCJXVKLIMGPI-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733995; PubChem:CID138467592
Local ready
Direct docking supported
E3L037054
BDB037054
BDBM733996
CC(C)(C)OC(=O)N1CCN(Cc2ncc3c(n2)C(=O)N(C2CCC(=O)NC2=O)C3)CC1
C21H28N6O5
444.492000
XEWGNTGGHCKRRK-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733996; PubChem:CID165374265
Local ready
Direct docking supported
E3L037055
BDB037055
BDBM733997
CC(C)(C)OC(=O)N1CCN(c2ncc3c(n2)C(=O)N(C2CCC(=O)NC2=O)C3)CC1
C20H26N6O5
430.465000
FCNSZNRLDCQVJP-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM733997; PubChem:CID165374283
Local ready
Direct docking supported
E3L037056
BDB037056
BDBM734000
C[C@H]1CC(=O)NC(=O)[C@@H]1N1C(=O)c2ccccc2C1=O
C14H12N2O4
272.260000
MKQZOLSLJWYXOK-WRWORJQWSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM734000; PubChem:CID101409923
Local ready
Direct docking supported
E3L037057
BDB037057
US20250127903, Degronimer 1
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCCCCNC(=O)c1ccc(=O)n(C3CCC(=O)NC3=O)c1)c1nnc(C)n1-2
C38H43ClN8O5S
759.333000
LMOZSBHBAMAJQB-XLTVJXRZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM734001; PubChem:CID132118434
Local ready
Direct docking supported
E3L037058
BDB037058
US20250127903, Degronimer 2
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCCCC(=O)Nc1ccc3ncn(C4CCC(=O)NC4=O)c3c1)c1nnc(C)n1-2
C39H42ClN9O4S
768.344000
JJJLHAHLGMQOPW-UFXYQILXSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM734002; PubChem:CID132118431
Local ready
Direct docking supported
E3L037059
BDB037059
US20250127903, Degronimer 3
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCCCCN1CCN(C3CCC(=O)NC3=O)C(=O)C1)c1nnc(C)n1-2
C36H45ClN8O4S
721.328000
ABHVSECOFCHTFY-MBMZGMDYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM734003; PubChem:CID132118114
Local ready
Direct docking supported
E3L037060
BDB037060
US20250127903, Degronimer 4
Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCCCCCCCN1CCN(c3cccc4c3C(=O)N(C3CCC(=O)NC3=O)C4=O)CC1)c1nnc(C)n1-2
C44H50ClN9O5S
852.462000
PALKZVIGHNYXLM-TXEYEHERSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM734004; PubChem:CID132118090
Local ready
Direct docking supported