E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L038241
BDB038241
US12310975, Example 475
CNC(=O)COc1cc2cc(Nc3nc(N4CCOCC4)ncc3Cl)ccc2n(CCOc2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3=O)c1=O
C35H33ClN8O9
745.149000
GOWHBTAYOGZLRN-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743928; PubChem:CID156292443
Local ready
Direct docking supported
E3L038242
BDB038242
US12310975, Example 476
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(O[C@H]5C[C@@H](COc6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)N(C)C5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C43H48ClN9O9
870.364000
NGCDYCCIJIRAFK-SXNBFZGNSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743929; PubChem:CID156292455
Local ready
Direct docking supported
E3L038243
BDB038243
US12310975, Example 477
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(O[C@H]5C[C@@H](Oc6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CN(C)C5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C43H48ClN9O9
870.364000
RSKRLZGFPPZJNF-MOCYAETESA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743930; PubChem:CID156292461
Local ready
Direct docking supported
E3L038244
BDB038244
US12310975, Example 478
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(O[C@@H]5C[C@@H](COc6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)N(C)C5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C43H48ClN9O9
870.364000
NGCDYCCIJIRAFK-NOUBFSLESA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743931; PubChem:CID156292902
Local ready
Direct docking supported
E3L038245
BDB038245
US12310975, Example 479
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(O[C@@H]5C[C@@H](Oc6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CN(C)C5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C43H48ClN9O9
870.364000
RSKRLZGFPPZJNF-OZIXFKSASA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743932; PubChem:CID156292901
Local ready
Direct docking supported
E3L038246
BDB038246
US12310975, Example 480
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(C5(N6CCC(c7cc(OC)cc(C(=O)NC8CCC(=O)NC8=O)c7F)CC6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C43H49ClFN9O7
858.372000
KAHHOOYLTAIDEJ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743933; PubChem:CID156292903
Local ready
Direct docking supported
E3L038247
BDB038247
US12310975, Example 481
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(C(C)(C)C5CCN(c6c(OC)ccc(C(=O)NC7CCC(=O)NC7=O)c6F)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C42H50ClFN10O7
861.376000
FGXWCKJPLSYUJL-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743934; PubChem:CID156292932
Local ready
Direct docking supported
E3L038248
BDB038248
US12310975, Example 482
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(C5(N6CCC(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)CC6)CC5)CC4)ncc3Cl)ccc2n(C)c1=O
C43H46ClN9O7
836.350000
NTNVYJZQBCZCJA-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743935; PubChem:CID156278375
Local ready
Direct docking supported
E3L038249
BDB038249
US12310975, Example 483
CNC(=O)COc1cc2cc(Nc3nc(N4CCC5(CC4)CC(CN4CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC4)C5)ncc3Cl)ccc2n(C(C)C)c1=O
C45H51ClN10O7
879.419000
NHLGBELVRADOPZ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743936; PubChem:CID156292923
Local ready
Direct docking supported
E3L038250
BDB038250
US12310975, Example 484
CNC(=O)COc1cc2cc(Nc3nc(N4CCC5(CC4)CC(CN4CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC4)C5)ncc3Cl)ccc2n(C(C)C)c1=O
C45H51ClN10O7
879.419000
BVQXAADHQFHRIH-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743937; PubChem:CID176371092
Local ready
Direct docking supported
E3L038251
BDB038251
US12310975, Example 485
CNC(=O)COc1cc2cc(Nc3nc(N4CCN(CC5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc2n(CC2COC2)c1=O
C43H47ClN10O8
867.364000
DKOFLTHHTWCDNE-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743938; PubChem:CID176371119
Local ready
Direct docking supported
E3L038252
BDB038252
US12310975, Example 486
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(O[C@@H]5C[C@H](COc6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)N(C)C5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C43H48ClN9O9
870.364000
NGCDYCCIJIRAFK-SVCPQJFISA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743939; PubChem:CID156292474
Local ready
Direct docking supported
E3L038253
BDB038253
US12310975, Example 487
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(O[C@@H]5C[C@H](Oc6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CN(C)C5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C43H48ClN9O9
870.364000
RSKRLZGFPPZJNF-OMUWIBBISA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743940; PubChem:CID156292476
Local ready
Direct docking supported
E3L038254
BDB038254
US12310975, Example 488
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(C5(N6CCC(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)CC6)CC5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C45H50ClN9O7
864.404000
UZHIBTSVRQRYPP-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743941; PubChem:CID156292475
Local ready
Direct docking supported
E3L038255
BDB038255
US12310975, Example 489
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCC6(CC5)CCN(c5ccc7c(c5)C(=O)N(C5CCC(=O)NC5=O)C7=O)C6)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C46H53ClN10O7
893.446000
ZSVVUIBFVZKNNN-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743942; PubChem:CID176371089
Local ready
Direct docking supported
E3L038256
BDB038256
US12310975, Example 490
CNC(=O)COc1cc2cc(Nc3nc(N4CCC5(CCN(CC6CCN(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)CC6)CC5)C4)ncc3Cl)ccc2n(C(C)C)c1=O
C46H53ClN10O7
893.446000
HJNVVNKBBAREBY-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743943; PubChem:CID176371001
Local ready
Direct docking supported
E3L038257
BDB038257
US12310975, Example 491
CNC(=O)COc1cc2cc(Nc3nc(N4CCC[C@H](COc5cccc6c5C(=O)N(C5CCC(=O)NC5=O)C6=O)C4)ncc3Cl)ccc2n(CC2COC2)c1=O
C39H39ClN8O9
799.241000
JTSZXYIMXJZBOB-QDLLFRBVSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743944; PubChem:CID176371134
Local ready
Direct docking supported
E3L038258
BDB038258
US12310975, Example 492
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCC(CN5CCN(c6cccc7c6C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)CC4)ncc3Cl)ccc21
C40H47ClN10O6
799.333000
HWWQXQNAHOOGIJ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743945; PubChem:CID176371087
Local ready
Direct docking supported
E3L038259
BDB038259
US12310975, Example 493
Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCC(OC5CC6(CCN(c7cccc8c7C(=O)N(C7CCC(=O)NC7=O)C8=O)CC6)C5)CC4)ncc3Cl)ccc21
C43H50ClN9O7
840.382000
WDPCVBDYYXSZAT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743946; PubChem:CID156292370
Local ready
Direct docking supported
E3L038260
BDB038260
US12310975, Example 494
CNC(=O)COc1cc2cc(Nc3nc(N4CCC(CN5CCC6(CCN(c7ccc8c(c7)C(=O)N(C7CCC(=O)NC7=O)C8=O)CC6)C5)CC4)ncc3Cl)ccc2n(C(C)C)c1=O
C46H53ClN10O7
893.446000
FKIAQWRGQNOMMO-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM743947; PubChem:CID156292371
Local ready
Direct docking supported