E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L038881
BDB038881
US20250188078, Ref. PA63
COCCOCC#Cc1ccc(-c2nc(C(=O)O)cc3c2[nH]c2ccccc23)cc1
C24H20N2O4
400.434000
WGXGKWFMYZTHRS-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748911; PubChem:CID176780710
Local ready
Direct docking supported
E3L038882
BDB038882
US20250188078, Ref. PA70
CS(=O)(=O)c1ccc(-c2nc(C(=O)O)nc3c2[nH]c2ccccc23)cc1
C18H13N3O4S
367.386000
VNBIJOCGAPTNIR-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748912; PubChem:CID169185923
Local ready
Direct docking supported
E3L038883
BDB038883
US20250188078, Ref. PA72
Cc1ccc2[nH]c3c(-c4ccc(S(C)(=O)=O)cc4)nc(C(=O)O)cc3c2c1
C20H16N2O4S
380.425000
GPPQOEHTYIIIBM-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748913; PubChem:CID176780703
Local ready
Direct docking supported
E3L038884
BDB038884
US20250188078, Ref. PA71
CS(=O)(=O)c1ccc(-c2nc(C(=O)O)cc3c2[nH]c2ccc(F)cc23)cc1
C19H13FN2O4S
384.388000
YTLNCZDVWGFVBL-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748914; PubChem:CID176780715
Local ready
Direct docking supported
E3L038885
BDB038885
US20250188078, Ref. PA77
O=C(O)c1cc2c([nH]c3ccccc32)c(-c2ccc(NS(=O)(=O)c3ccccc3)cc2)n1
C24H17N3O4S
443.484000
QFZFJOSABAIWGS-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748915; PubChem:CID169185990
Local ready
Direct docking supported
E3L038886
BDB038886
US20250188078, Ref. PA78
CN(c1ccc(-c2nc(C(=O)O)cc3c2[nH]c2ccccc23)c(F)c1)S(=O)(=O)c1ccccc1
C25H18FN3O4S
475.501000
HPPHVIUBHRVQNU-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748916; PubChem:CID176780696
Local ready
Direct docking supported
E3L038887
BDB038887
US20250188078, Ref. PA73
CS(=O)(=O)c1ccc(-c2nc(C(=O)O)cc3c2[nH]c2ccc(O)cc23)cc1
C19H14N2O5S
382.397000
HJKYBJRNVJGWNP-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748917; PubChem:CID176780691
Local ready
Direct docking supported
E3L038888
BDB038888
US20250188078, Ref. PA76
CS(=O)(=O)N(Cc1ccccc1)c1ccc(-c2nc(C(=O)O)cc3c2[nH]c2ccccc23)cc1
C26H21N3O4S
471.538000
OUVOUUTVWZKFLP-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748918; PubChem:CID169185978
Local ready
Direct docking supported
E3L038889
BDB038889
US20250188078, Ref. PA74
COc1ccc2[nH]c3c(-c4ccc(S(C)(=O)=O)cc4)nc(C(=O)O)cc3c2c1
C20H16N2O5S
396.424000
VLBNGXYLOHHLSG-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748919; PubChem:CID176780718
Local ready
Direct docking supported
E3L038890
BDB038890
US20250188078, Ref. PA75
CN(c1ccc(-c2nc(C(=O)O)cc3c2[nH]c2ccccc23)cc1)S(C)(=O)=O
C20H17N3O4S
395.440000
MTLPJIQKZZCUFI-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748920; PubChem:CID169185987
Local ready
Direct docking supported
E3L038891
BDB038891
US20250188078, Ref. PA55
CS(=O)(=O)NC(=O)c1cc2c([nH]c3ccccc32)c(-c2ccc(S(C)(=O)=O)cc2)n1
C20H17N3O5S2
443.506000
JZHAWPNPBRNIRC-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748921; PubChem:CID176780688
Local ready
Direct docking supported
E3L038892
BDB038892
US20250188078, Ref. PA93
CN(c1ccc(-c2nc(C(=O)O)cc3c2[nH]c2ccc(F)cc23)cc1)S(=O)(=O)c1ccccc1
C25H18FN3O4S
475.501000
NBDNRWLWFUIVCD-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748922; PubChem:CID169185938
Local ready
Direct docking supported
E3L038893
BDB038893
US20250188078, Ref. PA115
CN(c1ccc(-c2nc(C(=O)O)cc3c2[nH]c2cc(-c4ccccc4)ccc23)cc1)S(=O)(=O)c1ccccc1
C31H23N3O4S
533.609000
VRMATLZMWGWWBA-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748923; PubChem:CID169185997
Local ready
Direct docking supported
E3L038894
BDB038894
US20250188078, Ref. PA106
Cc1ccc2c(c1)[nH]c1c(-c3ccc(N(C)S(=O)(=O)c4ccccc4)cc3)nc(C(=O)O)cc12
C26H21N3O4S
471.538000
IVDHOZJKMITSIK-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748924; PubChem:CID169783037
Local ready
Direct docking supported
E3L038895
BDB038895
US20250188078, Ref. PA117
CN(c1ccc(-c2nc(C(=O)O)cc3c2[nH]c2cc(Br)ccc23)cc1)S(=O)(=O)c1ccccc1
C25H18BrN3O4S
536.407000
ASIKDBYRSBRVJJ-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748925; PubChem:CID169185984
Local ready
Direct docking supported
E3L038896
BDB038896
US20250188078, Ref. PA99
CN(c1ccc(-c2nc(C(=O)O)cc3c2[nH]c2cccc(F)c23)cc1)S(=O)(=O)c1ccccc1
C25H18FN3O4S
475.501000
YHJURDXQPOBIAP-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748926; PubChem:CID169185999
Local ready
Direct docking supported
E3L038897
BDB038897
US20250188078, Ref. PA1-1
CN(c1ccc(-c2nc(C(=O)O)cc3c2[nH]c2ccc(F)c(F)c23)cc1)S(=O)(=O)c1ccccc1
C25H17F2N3O4S
493.491000
JNZXDYGNGUKZOE-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748927; PubChem:CID169186023
Local ready
Direct docking supported
E3L038898
BDB038898
US20250188078, Ref. PA1-3
CN(c1ccc(-c2nc(C(=O)O)cc3c2[nH]c2cc(F)ccc23)cc1)S(=O)(=O)c1ccccc1
C25H18FN3O4S
475.501000
UOWDTNQZAJCROP-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748928; PubChem:CID169185915
Local ready
Direct docking supported
E3L038899
BDB038899
US20250188078, Ref. PA1-4
CN(c1ccc(-c2nc(C(=O)O)cc3c2[nH]c2c(F)cccc23)cc1)S(=O)(=O)c1ccccc1
C25H18FN3O4S
475.501000
RVCJJDXHZQGDSX-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748929; PubChem:CID169186013
Local ready
Direct docking supported
E3L038900
BDB038900
US20250188078, Ref. PA2-1
Cc1ccc(S(=O)(=O)N(C)c2ccc(-c3nc(C(=O)O)cc4c3[nH]c3ccc(F)cc34)cc2)cc1
C26H20FN3O4S
489.528000
WPWIOKIYUNCJSJ-UHFFFAOYSA-N Q13619 Streptavidin
BindingDB, PubChem
BindingDB:BDBM748930; PubChem:CID169185992
Local ready
Direct docking supported