E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L039281
BDB039281
US20250197363, Example 24
Cc1ccc(-c2nnc(CSc3ccc(OC(C)(C)C(=O)O)c(C)c3)s2)cc1
C21H22N2O3S2
414.552000
RSFUYJNOGXICGU-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM751485; PubChem:CID169187876
Local ready
Direct docking supported
E3L039282
BDB039282
US20250197363, Example 25
Cc1cc(SCc2nnc(-c3ccc(OC(F)(F)F)cc3)s2)ccc1OCC(=O)O
C19H15F3N2O4S2
456.467000
CUBNPKYXENIHPS-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM751486; PubChem:CID169187935
Local ready
Direct docking supported
E3L039283
BDB039283
US20250197363, Example 26
Cc1cc(SCc2nnc(-c3ccc(OC(F)(F)F)cc3)s2)ccc1OC(C)C(=O)O
C20H17F3N2O4S2
470.494000
SIJYXRGIGMDMCY-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM751487; PubChem:CID169187931
Local ready
Direct docking supported
E3L039284
BDB039284
US20250197363, Example 27
Cc1cc(SCc2nnc(-c3ccc(OC(F)(F)F)cc3)s2)ccc1OC(C)(C)C(=O)O
C21H19F3N2O4S2
484.521000
YWDZEMYMLXVOCA-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM751488; PubChem:CID169187919
Local ready
Direct docking supported
E3L039285
BDB039285
BDBM753595
COc1cc(F)c(-c2ncc(N3CCC[C@](N)([C@H](O)C(F)F)C3)c(Cn3cnc4c(N)ncnc43)n2)cc1F
C24H25F4N9O2
547.517000
UCYIIAXZKDMECE-NTKDMRAZSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM753595; PubChem:CID170423876
Local ready
Direct docking supported
E3L039286
BDB039286
BDBM753597
COc1cc(F)c(-c2cc(Cn3cnc4c(N)ncnc43)c(N3CCC[C@](N)([C@H](O)C(F)F)C3)nn2)cc1F
C24H25F4N9O2
547.517000
CEMVFFKRBGENGF-NTKDMRAZSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM753597; PubChem:CID170423883
Local ready
Direct docking supported
E3L039287
BDB039287
BDBM753608
COc1cc(F)c(-c2nc(Cn3cnc4c(N)ncnc43)c(N3CCC[C@@](N)([C@H](O)C(F)F)C3)s2)cc1F
C23H24F4N8O2S
552.558000
CVNINEZIGMHMRK-HXOBKFHXSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM753608; PubChem:CID176801984
Local ready
Direct docking supported
E3L039288
BDB039288
BDBM755773
CCC1Oc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4)CC3)cc2NC1=O
C22H27N5O3
409.490000
OKGPSMHXUQXCGD-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM755773; PubChem:CID169189583
Local ready
Direct docking supported
E3L039289
BDB039289
BDBM755805
CC[C@H]1Oc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4C)CC3)cc2NC1=O
C23H29N5O3
423.517000
XYEMFJYBYFKKDF-HXUWFJFHSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM755805; PubChem:CID169189677
Local ready
Direct docking supported
E3L039290
BDB039290
BDBM755806
CC[C@H]1Oc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4)CC3)cc2NC1=O
C22H27N5O3
409.490000
OKGPSMHXUQXCGD-LJQANCHMSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM755806; PubChem:CID169189655
Local ready
Direct docking supported
E3L039291
BDB039291
BDBM755807
CC[C@@H]1Oc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4C)CC3)cc2NC1=O
C23H29N5O3
423.517000
XYEMFJYBYFKKDF-FQEVSTJZSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM755807; PubChem:CID169189517
Local ready
Direct docking supported
E3L039292
BDB039292
BDBM755808
CC[C@@H]1Oc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4)CC3)cc2NC1=O
C22H27N5O3
409.490000
OKGPSMHXUQXCGD-IBGZPJMESA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM755808; PubChem:CID170225794
Local ready
Direct docking supported
E3L039293
BDB039293
BDBM755809
CC[C@H]1Oc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4F)CC3)c(F)c2NC1=O
C22H25F2N5O3
445.470000
WEZJNZMHKCQRKH-MRXNPFEDSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM755809; PubChem:CID169189586
Local ready
Direct docking supported
E3L039294
BDB039294
BDBM755810
CC[C@@H]1Oc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4F)CC3)c(F)c2NC1=O
C22H25F2N5O3
445.470000
WEZJNZMHKCQRKH-INIZCTEOSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM755810; PubChem:CID169189596
Local ready
Direct docking supported
E3L039295
BDB039295
BDBM755811
CNC(=O)c1ccc(N2CCN(Cc3ccc4c(c3)NC(=O)C3(CCC3)O4)CC2)cn1
C23H27N5O3
421.501000
DQZPSEMISYDNCG-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM755811; PubChem:CID169189745
Local ready
Direct docking supported
E3L039296
BDB039296
BDBM755812
CNC(=O)c1ccc(N2CCN(Cc3ccc4c(c3)NC(=O)C3(CC3)O4)CC2)cn1
C22H25N5O3
407.474000
MEKKVEHXCLTYHC-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM755812; PubChem:CID169189669
Local ready
Direct docking supported
E3L039297
BDB039297
BDBM755813
CNC(=O)c1ccc(N2CCN(Cc3ccc4c(c3F)NC(=O)C3(CC3)O4)CC2)c(F)n1
C22H23F2N5O3
443.454000
OFGNIXJVOJIERY-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM755813; PubChem:CID169189663
Local ready
Direct docking supported
E3L039298
BDB039298
BDBM755814
CCC1Oc2ccc(CN3CCN(c4ccc(C(=O)NC)nc4F)CC3)c(F)c2NC1=O
C22H25F2N5O3
445.470000
WEZJNZMHKCQRKH-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM755814; PubChem:CID169189589
Local ready
Direct docking supported
E3L039299
BDB039299
BDBM755815
CNC(=O)c1ccc(N2CCN(Cc3ccc4c(c3)NC(=O)C3(CC3)O4)C(C)C2)cn1
C23H27N5O3
421.501000
UVUUFMFZTOZNLT-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM755815; PubChem:CID177373537
Local ready
Direct docking supported
E3L039300
BDB039300
BDBM755816
CNC(=O)c1ccc(N2CCN(Cc3ccc4c(c3)NC(=O)C3(CC3)O4)CC2)c(F)n1
C22H24FN5O3
425.464000
FDHNEZVKSWWBGI-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM755816; PubChem:CID169189520
Local ready
Direct docking supported