E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L039321
BDB039321
BDBM755838
O=C1CCC(N2Cc3cc(-c4cc(CN5CCCC5c5ccccc5)cc5nncn45)ccc3C2=O)C(=O)N1
C30H28N6O3
520.593000
ZVPDDTDQGBZWLI-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755838; PubChem:CID169206598
Local ready
Direct docking supported
E3L039322
BDB039322
BDBM755839
O=C1CCC(N2Cc3cc(-c4cc(CN5CC6COCC(C6)C5)cc5cncn45)ccc3C2=O)C(=O)N1
C28H29N5O4
499.571000
AUNWBZLHFXWJAN-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755839; PubChem:CID169206540
Local ready
Direct docking supported
E3L039323
BDB039323
BDBM755840
Cn1cnc2c(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)cc(CNCCc3ccccc3Cl)cc21
C30H28ClN5O3
542.039000
HZTGZHRBDWGKKB-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755840; PubChem:CID169206664
Local ready
Direct docking supported
E3L039324
BDB039324
BDBM755841
CCN(CC)Cc1cc(-c2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)n2cncc2c1
C25H27N5O3
445.523000
UBBJCZIHWBUUHL-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755841; PubChem:CID169206359
Local ready
Direct docking supported
E3L039325
BDB039325
BDBM755842
O=C1CCC(N2Cc3cc(-c4ncc5cc(CN6CCCC6)ccn45)ccc3C2=O)C(=O)N1
C25H25N5O3
443.507000
XNDMBMIIADPBNZ-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755842; PubChem:CID169206160
Local ready
Direct docking supported
E3L039326
BDB039326
BDBM755843
O=C1CCC(N2Cc3cc(-c4cc(CNCc5ccccc5)cc5cncn45)ccc3C2=O)C(=O)N1
C28H25N5O3
479.540000
NYBWJJDARDHZLM-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755843; PubChem:CID169206644
Local ready
Direct docking supported
E3L039327
BDB039327
BDBM755844
O=C1CCC(N2Cc3cc(-c4ncc5ccc(CN6CCCC6)cn45)ccc3C2=O)C(=O)N1
C25H25N5O3
443.507000
QTAFXDAVIHODDD-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755844; PubChem:CID169206752
Local ready
Direct docking supported
E3L039328
BDB039328
BDBM755845
C[C@H](NCc1cc(-c2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)n2cncc2c1)c1ccccc1
C29H27N5O3
493.567000
AXNCQSIWWKCFGQ-CPFIQGLUSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755845; PubChem:CID170162256
Local ready
Direct docking supported
E3L039329
BDB039329
BDBM755846
O=C1CCC(N2Cc3cc(-c4ccc(CN5CCCC5)c5cncn45)ccc3C2=O)C(=O)N1
C25H25N5O3
443.507000
DKLNETZPQKLLJM-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755846; PubChem:CID169206230
Local ready
Direct docking supported
E3L039330
BDB039330
BDBM755847
C[C@@H](c1ccccc1)N(C)Cc1cc(-c2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)n2cncc2c1
C30H29N5O3
507.594000
QTXDKOMGTODFNN-SXMXNQBWSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755847; PubChem:CID169206048
Local ready
Direct docking supported
E3L039331
BDB039331
BDBM755848
Cn1ccc2c(CN3CCCC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C26H27N5O3
457.534000
KVQJAVVPCZGJEN-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755848; PubChem:CID169206347
Local ready
Direct docking supported
E3L039332
BDB039332
BDBM755849
C[C@@H](NCc1cc(-c2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)n2cncc2c1)c1ccccc1
C29H27N5O3
493.567000
AXNCQSIWWKCFGQ-YDONVPIESA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755849; PubChem:CID169206684
Local ready
Direct docking supported
E3L039333
BDB039333
BDBM755850
Cn1ccc2c(CN3CCC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C25H25N5O3
443.507000
JNVSCKNEWBPQNS-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755850; PubChem:CID169206040
Local ready
Direct docking supported
E3L039334
BDB039334
BDBM755851
C[C@H](c1ccccc1)N(C)Cc1cc(-c2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)n2cncc2c1
C30H29N5O3
507.594000
QTXDKOMGTODFNN-ICCFGIFFSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755851; PubChem:CID169206226
Local ready
Direct docking supported
E3L039335
BDB039335
BDBM755852
Cn1ccc2c(CN3CCCCC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C27H29N5O3
471.561000
IZLXEUCRZZNXIZ-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755852; PubChem:CID169206446
Local ready
Direct docking supported
E3L039336
BDB039336
BDBM755853
CC(C)(NCc1cc(-c2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)n2cncc2c1)c1ccccc1
C30H29N5O3
507.594000
LXMSNFGWQBHZMH-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755853; PubChem:CID169206409
Local ready
Direct docking supported
E3L039337
BDB039337
BDBM755854
Cn1ccc2c(CN3CCOCC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C26H27N5O4
473.533000
HOGHCAOEQUIRFA-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755854; PubChem:CID169206068
Local ready
Direct docking supported
E3L039338
BDB039338
BDBM755855
CN(Cc1cc(-c2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)n2cncc2c1)C(C)(C)c1ccccc1
C31H31N5O3
521.621000
HYQPQHANTODOGE-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755855; PubChem:CID169206259
Local ready
Direct docking supported
E3L039339
BDB039339
BDBM755857
CC(NCc1cc(-c2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)n2cncc2c1)c1cccc(Cl)c1
C29H26ClN5O3
528.012000
CAHBQMFSFAXRCO-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755857; PubChem:CID169206706
Local ready
Direct docking supported
E3L039340
BDB039340
BDBM755858
Cn1ccc2c(CN3CCC(F)(F)CC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C27H27F2N5O3
507.541000
UMSNJYPGWNCAGO-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755858; PubChem:CID169206079
Local ready
Direct docking supported