E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L039401
BDB039401
BDBM755920
CS(=O)(=O)C1CCN(Cc2cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc3c2ccn3C2COC2)CC1
C30H33N5O6S
591.690000
SDZWHTSOPZTRQC-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755920; PubChem:CID169206531
Local ready
Direct docking supported
E3L039402
BDB039402
BDBM755921
COC1CCN(Cc2cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc3c2ccn3C)C1
C27H29N5O4
487.560000
YQKJMSVINCCMSH-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755921; PubChem:CID169206141
Local ready
Direct docking supported
E3L039403
BDB039403
BDBM755922
O=C1CCC(N2Cc3cc(-c4cc(CN5CC6COCC6C5)c5ccn(C6COC6)c5n4)ccc3C2=O)C(=O)N1
C30H31N5O5
541.608000
SBKNIOSEDPABHI-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755922; PubChem:CID169206583
Local ready
Direct docking supported
E3L039404
BDB039404
BDBM755923
Cn1ccc2c(CN3CCC(n4cccn4)CC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C30H31N7O3
537.624000
LSSWFCXTBUBWRV-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755923; PubChem:CID169206515
Local ready
Direct docking supported
E3L039405
BDB039405
BDBM755924
O=C1CCC(N2Cc3cc(-c4cc(CN5CCC(F)CC5)c5ccn(C6COC6)c5n4)ccc3C2=O)C(=O)N1
C29H30FN5O4
531.588000
NYGWMCOAOODSEG-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755924; PubChem:CID169206258
Local ready
Direct docking supported
E3L039406
BDB039406
BDBM755925
Cn1ccc2c(CN3CCN4CCCC4C3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C29H32N6O3
512.614000
FOAGPHGYAGIRTF-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755925; PubChem:CID169206312
Local ready
Direct docking supported
E3L039407
BDB039407
BDBM755926
O=C1CCC(N2Cc3cc(-c4cc(CN5CCC6(CC5)COC6)c5ccn(C6COC6)c5n4)ccc3C2=O)C(=O)N1
C31H33N5O5
555.635000
WOOZSNNGRRAFTN-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755926; PubChem:CID169206630
Local ready
Direct docking supported
E3L039408
BDB039408
BDBM755927
Cn1ccc2c(CN3CCC(CO)C3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C27H29N5O4
487.560000
MEKMBISBRYYZTH-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755927; PubChem:CID169206787
Local ready
Direct docking supported
E3L039409
BDB039409
BDBM755928
COC1CCN(Cc2cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc3c2ccn3C2COC2)CC1
C30H33N5O5
543.624000
DRQYISVKLOTSKL-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755928; PubChem:CID169206254
Local ready
Direct docking supported
E3L039410
BDB039410
BDBM755929
Cn1ccc2c(Cn3cnc4ccccc43)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C29H24N6O3
504.550000
VNBIQDGMTPZFMJ-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755929; PubChem:CID169206528
Local ready
Direct docking supported
E3L039411
BDB039411
BDBM755930
CN(C)C1CCN(Cc2cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc3c2ccn3C2COC2)CC1
C31H36N6O4
556.667000
ZZZCKETYVPNUPL-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755930; PubChem:CID169206829
Local ready
Direct docking supported
E3L039412
BDB039412
BDBM755931
CCn1ccc2c(CN3CCC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C26H27N5O3
457.534000
GGONELJWOBJQIN-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755931; PubChem:CID169206798
Local ready
Direct docking supported
E3L039413
BDB039413
BDBM755932
O=C1CCC(N2Cc3cc(-c4cc(CN5CC6COCC(C6)C5)c5ccn(C6COC6)c5n4)ccc3C2=O)C(=O)N1
C31H33N5O5
555.635000
ZAKPUOZUWACNSV-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755932; PubChem:CID169206501
Local ready
Direct docking supported
E3L039414
BDB039414
BDBM755933
Cn1ccnc1N1CCN(Cc2cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc3c2ccn3C)CC1
C30H32N8O3
552.639000
FQJLLFOCYPGIOW-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755933; PubChem:CID169206730
Local ready
Direct docking supported
E3L039415
BDB039415
BDBM755934
N#CC1CCN(Cc2cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc3c2ccn3C2COC2)CC1
C30H30N6O4
538.608000
KYLQTBDIXYVORD-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755934; PubChem:CID169206594
Local ready
Direct docking supported
E3L039416
BDB039416
BDBM755935
Cn1ccc2c(CN3CC4(CCOCC4)C3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C29H31N5O4
513.598000
ZCPXGCUCZNOZMM-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755935; PubChem:CID169206075
Local ready
Direct docking supported
E3L039417
BDB039417
BDBM755937
Cn1ccc2c(CN3CCCC3CO)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C27H29N5O4
487.560000
SSPGFXMZXMLWIW-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755937; PubChem:CID169206868
Local ready
Direct docking supported
E3L039418
BDB039418
BDBM755938
Cc1nc2nc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)cc(CN3CCCC3)c2o1
C25H25N5O4
459.506000
DAMHCGBSSAVFCT-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755938; PubChem:CID169206375
Local ready
Direct docking supported
E3L039419
BDB039419
BDBM755939
COC1CCN(Cc2cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc3c2ccn3C)CC1
C28H31N5O4
501.587000
WDUSIYSBPBJPMP-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755939; PubChem:CID169206869
Local ready
Direct docking supported
E3L039420
BDB039420
BDBM755940
Cc1cc(-c2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)nc2nc(CN3CCCC3)oc12
C25H25N5O4
459.506000
LPSFJFAVGXWGLB-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755940; PubChem:CID169206445
Local ready
Direct docking supported