E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L039461
BDB039461
BDBM755993
O=C1CCC(N2Cc3cc(-c4cc(CN5CCCC5)c5ccn(C6COC6)c5n4)ccc3C2=O)C(=O)N1
C28H29N5O4
499.571000
OZSNWUQQBQCHTP-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755993; PubChem:CID169206242
Local ready
Direct docking supported
E3L039462
BDB039462
BDBM755994
O=C1CCC(N2Cc3c(ccc(-c4cc(CN5CCCC5)c5ccn(C6COC6)c5n4)c3Cl)C2=O)C(=O)N1
C28H28ClN5O4
534.016000
AFNRIQQQGSFVEP-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755994; PubChem:CID169206642
Local ready
Direct docking supported
E3L039463
BDB039463
BDBM755995
O=C1CCC(N2Cc3cc(-c4cc(CN5CCCC5)c5ccn(CCOCc6ccccc6)c5n4)ccc3C2=O)C(=O)N1
C34H35N5O4
577.685000
MFKGOKGLUYERGJ-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755995; PubChem:CID169206138
Local ready
Direct docking supported
E3L039464
BDB039464
BDBM755996
Cn1ccc2c(CN3CCCC3)c(Cl)c(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C26H26ClN5O3
491.979000
BBBDKZXECIHBBJ-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755996; PubChem:CID169206427
Local ready
Direct docking supported
E3L039465
BDB039465
BDBM755997
O=C1CCC(N2Cc3cc(-c4cc(CN5CCCC5)c5ccn(CCO)c5n4)ccc3C2=O)C(=O)N1
C27H29N5O4
487.560000
PVWUDRLADDLBHL-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755997; PubChem:CID169206419
Local ready
Direct docking supported
E3L039466
BDB039466
BDBM755998
O=C1CCC(N2Cc3c(ccc(-c4cc(CN5CCCC5)c5ccn(C6CS(=O)(=O)C6)c5n4)c3Cl)C2=O)C(=O)N1
C28H28ClN5O5S
582.082000
ILKJREXRUIPGRL-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755998; PubChem:CID169206525
Local ready
Direct docking supported
E3L039467
BDB039467
BDBM755999
Cc1cc(-c2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)nc2c1CCN2CCO
C23H24N4O4
420.469000
XOLPNYXCYHVPIL-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM755999; PubChem:CID169206062
Local ready
Direct docking supported
E3L039468
BDB039468
BDBM756000
Cn1ccc2c(C3CCCCN3)cc(-c3ccc4c(c3)CN([C@H]3CCC(=O)NC3=O)C4=O)nc21
C26H27N5O3
457.534000
NEVYZJQPUNEGLT-IAXKEJLGSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756000; PubChem:CID169206637
Local ready
Direct docking supported
E3L039469
BDB039469
BDBM756001
N#CCn1ccc2c(CN3CCCC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C27H26N6O3
482.544000
TZIXEQKGIYTVSA-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756001; PubChem:CID169206754
Local ready
Direct docking supported
E3L039470
BDB039470
BDBM756002
CC(C)Oc1ccnc2c(CN3CCCC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc12
C29H31N5O4
513.598000
WLWWMHMWSBPAJC-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756002; PubChem:CID169206703
Local ready
Direct docking supported
E3L039471
BDB039471
BDBM756003
O=C1CCC(N2Cc3cc(-c4cc(CN5CCCC5)c5ccn(-c6ccccc6)c5n4)ccc3C2=O)C(=O)N1
C31H29N5O3
519.605000
DRILSUURFODIOO-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756003; PubChem:CID169206523
Local ready
Direct docking supported
E3L039472
BDB039472
BDBM756004
O=C1CCC(N2Cc3cc(-c4cc(CN5CCCC5)c5c(n4)C(=O)NC5)ccc3C2=O)C(=O)N1
C25H25N5O4
459.506000
OBRDJGOODJUYSU-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756004; PubChem:CID169206618
Local ready
Direct docking supported
E3L039473
BDB039473
BDBM756005
CC(C)Cn1ccc2c(CN3CCCC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc21
C29H33N5O3
499.615000
SKJKQEPFRBWCHY-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756005; PubChem:CID169206257
Local ready
Direct docking supported
E3L039474
BDB039474
BDBM756007
O=C1CCC(N2Cc3cc(-c4cc(CN5CCC(F)C5)c5ccn(C6CC6)c5n4)ccc3C2=O)C(=O)N1
C28H28FN5O3
501.562000
FSVIAFRZZHMHRZ-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756007; PubChem:CID169206170
Local ready
Direct docking supported
E3L039475
BDB039475
BDBM756009
O=C1CCC(N2Cc3cc(-c4cc(CN5CCC(O)C5)c5ccn(C6CC6)c5n4)ccc3C2=O)C(=O)N1
C28H29N5O4
499.571000
FQZAPUVCHPBMND-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756009; PubChem:CID169206831
Local ready
Direct docking supported
E3L039476
BDB039476
BDBM756010
CC(C)Nc1ccnc2c(CN3CCCC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc12
C29H32N6O3
512.614000
HBJBHKQSYMNSIK-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756010; PubChem:CID169206129
Local ready
Direct docking supported
E3L039477
BDB039477
BDBM756011
O=C1CCC(N2Cc3cc(-c4cc(CN5CC(F)C5)c5ccn(C6CC6)c5n4)ccc3C2=O)C(=O)N1
C27H26FN5O3
487.535000
HPVLOAVLZCPGIR-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756011; PubChem:CID169206132
Local ready
Direct docking supported
E3L039478
BDB039478
BDBM756012
CN(C)c1ccnc2c(CN3CCCC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc12
C28H30N6O3
498.587000
PSVXVLXUPOQTTK-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756012; PubChem:CID169206313
Local ready
Direct docking supported
E3L039479
BDB039479
BDBM756013
O=C1CCC(N2Cc3cc(-c4cc(CN5CCC(CO)CC5)c5ccn(C6CC6)c5n4)ccc3C2=O)C(=O)N1
C30H33N5O4
527.625000
QVDBDPQQOTURJQ-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756013; PubChem:CID169206187
Local ready
Direct docking supported
E3L039480
BDB039480
BDBM756015
O=C1CCC(N2Cc3cc(-c4cc(CN5CCCC5)c5nc[nH]c5n4)ccc3C2=O)C(=O)N1
C24H24N6O3
444.495000
SGLSMDVJOQDTEI-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756015; PubChem:CID169206562
Local ready
Direct docking supported