E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L041441
BDB041441
US20250296939, Example 79
Cc1c([C@@H](CC(=O)O)c2cc(CN3Cc4cnc(O)cc4OC4(CC4)C3)c3sccc3c2)ccc2c1nnn2C
C30H29N5O4S
555.660000
RPVATVQRGMNUBB-QHCPKHFHSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773688; PubChem:CID169261485
Local ready
Direct docking supported
E3L041442
BDB041442
US20250296939, Example 80
CC[C@H]1Cc2ccc(O)nc2CN(Cc2cc([C@@H](CC(=O)O)c3cnc4c(nnn4C)c3C)cc3ccsc23)C1
C30H32N6O3S
556.692000
PDFCZUMDQQNSKD-FDDCHVKYSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773689; PubChem:CID169261400
Local ready
Direct docking supported
E3L041443
BDB041443
US20250296939, Example 24
CC[C@H]1Cc2ccc(O)nc2CN(Cc2cc([C@H](CC(=O)O)c3cnc4c(nnn4C)c3C)cc3ccsc23)C1
C30H32N6O3S
556.692000
PDFCZUMDQQNSKD-MBSDFSHPSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773690; PubChem:CID169261245
Local ready
Direct docking supported
E3L041444
BDB041444
US20250296939, Example 82
Cc1c([C@@H](CC(=O)O)c2cc(CN3Cc4c(ccnc4O)OC4(CC4)C3)c3sccc3c2)ccc2c1nnn2C
C30H29N5O4S
555.660000
PXRUBBOAFSPOQQ-QFIPXVFZSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773691; PubChem:CID169261300
Local ready
Direct docking supported
E3L041445
BDB041445
US20250296939, Example 83
CC[C@H]1Cc2ccc(NC)nc2CN(Cc2cc([C@@H](CC(=O)O)c3ccc4c(nnn4C)c3C)cc3ccsc23)C1
C32H36N6O2S
568.747000
XDILTXWNFOJWHW-RXFWQSSRSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773692; PubChem:CID177273818
Local ready
Direct docking supported
E3L041446
BDB041446
US20250296939, Example 84
CC[C@H]1Cc2ccc(O)nc2CN(Cc2cc([C@H](CC(=O)O)c3ccc4c(nnn4C)c3Cl)cc3ccsc23)C1
C30H30ClN5O3S
576.122000
DBBXEQCMHHVTAH-SBUREZEXSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773693; PubChem:CID169261374
Local ready
Direct docking supported
E3L041447
BDB041447
US20250296939, Example 85
CC[C@H]1Cc2ccc(O)nc2CN(Cc2cc([C@H](CC(=O)O)c3cc(Cl)c4c(nnn4C)c3C)cc3ccsc23)C1
C31H32ClN5O3S
590.149000
VKSRVZMRSRGMDZ-UUOWRZLLSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773694; PubChem:CID169261302
Local ready
Direct docking supported
E3L041448
BDB041448
US20250296939, Example 17
CC[C@H]1Cc2ccc(O)nc2CN(Cc2cc([C@H](CC(=O)O)c3cc(C)c4c(nnn4C)c3C)cc3ccsc23)C1
C32H35N5O3S
569.731000
DJBZBARHSAYBAA-FNZWTVRRSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773695; PubChem:CID169261263
Local ready
Direct docking supported
E3L041449
BDB041449
US20250296939, Example 87
CC[C@H]1Cc2ccc(O)nc2CN(Cc2cc([C@@H](CC(=O)O)c3cc(C)c4c(nnn4C)c3C)cc3ccsc23)C1
C32H35N5O3S
569.731000
DJBZBARHSAYBAA-RXFWQSSRSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773696; PubChem:CID169261330
Local ready
Direct docking supported
E3L041450
BDB041450
US20250296939, Example 88
Cc1c([C@H](CC(=O)O)c2cc(CN3Cc4nc(O)ccc4CC(C4CC4)C3)c3sccc3c2)ccc2c1nnn2C
C32H33N5O3S
567.715000
DMTWMDVPFAGRAA-ANWICMFUSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773697; PubChem:CID170312422
Local ready
Direct docking supported
E3L041451
BDB041451
US20250296939, Example 88
Cc1c([C@H](CC(=O)O)c2cc(CN3Cc4nc(O)ccc4CC(C4CC4)C3)c3sccc3c2)ccc2c1nnn2C
C32H33N5O3S
567.715000
DMTWMDVPFAGRAA-ANWICMFUSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773698; PubChem:CID170312422
Local ready
Direct docking supported
E3L041452
BDB041452
US20250296939, Example 90
Cc1c([C@H](CC(=O)O)c2cc(CN3Cc4nc(O)ccc4CC(C4CC4)C3)c3sccc3c2)cnc2c1nnn2C
C31H32N6O3S
568.703000
SVDCIJDQXWLMSJ-SYIFMXBLSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773699; PubChem:CID170312400
Local ready
Direct docking supported
E3L041453
BDB041453
US20250296939, Example 90
Cc1c([C@H](CC(=O)O)c2cc(CN3Cc4nc(O)ccc4CC(C4CC4)C3)c3sccc3c2)cnc2c1nnn2C
C31H32N6O3S
568.703000
SVDCIJDQXWLMSJ-SYIFMXBLSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773700; PubChem:CID170312400
Local ready
Direct docking supported
E3L041454
BDB041454
US20250296939, Example 92
CC[C@@H]1CN(Cc2cc(C(CC(=O)O)c3ccc4c(nnn4CC)c3C)cc3ccsc23)Cc2nc(C)ccc2O1
C32H35N5O3S
569.731000
WPMKAZPBQNYMJU-RMVMEJTISA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773701; PubChem:CID169261540
Local ready
Direct docking supported
E3L041455
BDB041455
US20250296939, Example 93
CC[C@@H]1CN(Cc2cc(C(CC(=O)O)c3ccc4c(nnn4C)c3C)cc3ccsc23)Cc2nc(C(F)(F)F)ccc2O1
C31H30F3N5O3S
609.674000
LYBCERZZTOSSIV-FKHAVUOCSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773702; PubChem:CID169261556
Local ready
Direct docking supported
E3L041456
BDB041456
US20250304535, Example C1
COc1ccc(C(C)(C)C)cc1S(=O)(=O)NC(=O)c1ccc(Cn2cccn2)c(I)c1
C22H24IN3O4S
553.422000
MTDGXOVABSLJQQ-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM773957; PubChem:CID177288286
Local ready
Direct docking supported
E3L041457
BDB041457
US20250304535, Example C4
C=Cc1cc(C(=O)NS(=O)(=O)c2cc(C(C)(C)C)ccc2OC)ccc1Cn1cccn1
C24H27N3O4S
453.564000
JNHRTTFAUYYDBP-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM773963; PubChem:CID177288250
Local ready
Direct docking supported
E3L041458
BDB041458
US20250304535, Example C5
COc1ccc(C(C)(C)C)cc1S(=O)(=O)NC(=O)c1ccc(Cn2cccn2)c(-c2ccco2)c1
C26H27N3O5S
493.585000
SVDCKLVACUGAJU-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM773965; PubChem:CID177288372
Local ready
Direct docking supported
E3L041459
BDB041459
US20250304535, Example C6
CCc1cc(C(=O)NS(=O)(=O)c2cc(C(C)(C)C)ccc2OC)ccc1Cn1cccn1
C24H29N3O4S
455.580000
KXZMZRPSNJTGQY-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM773966; PubChem:CID177288415
Local ready
Direct docking supported
E3L041460
BDB041460
US20250304535, Example C7
COc1cc(C(=O)NS(=O)(=O)c2cc(C(C)(C)C)ccc2OC)ccc1Cn1cccn1
C23H27N3O5S
457.552000
LWPWRISGOJPKJO-UHFFFAOYSA-N Q92794 Histone acetyltransferase KAT6A
BindingDB, PubChem
BindingDB:BDBM773967; PubChem:CID177288339
Local ready
Direct docking supported