E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L041401
BDB041401
US20250296939, Example 39
Cc1c([C@H](CC(=O)O)c2cc(CN3Cc4nc(O)ccc4O[C@@H](C(F)(F)F)C3)c3sccc3c2)ccc2c1nnn2C
C29H26F3N5O4S
597.619000
ZFHXITOPGWKMMQ-HYBUGGRVSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773648; PubChem:CID169261561
Local ready
Direct docking supported
E3L041402
BDB041402
US20250296939, Example 40
Cc1c([C@@H](CC(=O)O)c2cc(CN3Cc4nc(O)ccc4O[C@@H](C(F)(F)F)C3)c3sccc3c2)ccc2c1nnn2C
C29H26F3N5O4S
597.619000
ZFHXITOPGWKMMQ-GBXCKJPGSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773649; PubChem:CID169261552
Local ready
Direct docking supported
E3L041403
BDB041403
US20250296939, Example 41
CC[C@@H]1CN(Cc2cc([C@@H](CC(=O)O)c3cc(OC(F)(F)F)c4c(c3C)NNN4C)cc3ccsc23)Cc2nc(O)ccc2O1
C31H32F3N5O5S
643.688000
XOTNWMDOPZVQHG-IFMALSPDSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773650; PubChem:CID177273845
Local ready
Direct docking supported
E3L041404
BDB041404
US20250296939, Example 42
CC[C@@H]1CN(Cc2cc([C@H](CC(=O)O)c3cc(OC(F)(F)F)c4c(c3C)NNN4C)cc3ccsc23)Cc2nc(O)ccc2O1
C31H32F3N5O5S
643.688000
XOTNWMDOPZVQHG-IRLDBZIGSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773651; PubChem:CID177273820
Local ready
Direct docking supported
E3L041405
BDB041405
US20250296939, Example 43
CC[C@@H]1CN(Cc2cc([C@@H](CC(=O)O)c3cc(OC(F)F)c4c(c3C)NNN4C)cc3ccsc23)Cc2nc(O)ccc2O1
C31H33F2N5O5S
625.698000
IWACTTRDDKPINY-IFMALSPDSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773652; PubChem:CID177273849
Local ready
Direct docking supported
E3L041406
BDB041406
US20250296939, Example 44
CC[C@@H]1CN(Cc2cc([C@H](CC(=O)O)c3cc(OC(F)F)c4c(c3C)NNN4C)cc3ccsc23)Cc2nc(O)ccc2O1
C31H33F2N5O5S
625.698000
IWACTTRDDKPINY-IRLDBZIGSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773653; PubChem:CID177273859
Local ready
Direct docking supported
E3L041407
BDB041407
US20250296939, Example 45
Cc1c([C@H](CC(=O)O)c2cc(CN3Cc4nc(O)ccc4O[C@H](C(C)(F)F)C3)c3sccc3c2)ccc2c1nnn2C
C30H29F2N5O4S
593.656000
CSLMEGDUVMJFIA-BWKNWUBXSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773654; PubChem:CID169261398
Local ready
Direct docking supported
E3L041408
BDB041408
US20250296939, Example 46
Cc1c([C@H](CC(=O)O)c2cc(CN3Cc4nc(O)ccc4O[C@H](C(F)(F)F)C3)c3sccc3c2)cnc2c1nnn2C
C28H25F3N6O4S
598.607000
DWFCHLPEZBYTPH-GCJKJVERSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773655; PubChem:CID169261581
Local ready
Direct docking supported
E3L041409
BDB041409
US20250296939, Example 47
Cc1c([C@@H](c2cc(CN3Cc4nc(O)ccc4OC4(CC4)C3)c3sccc3c2)C(C)(C)C(=O)O)ccc2c1nnn2C
C32H33N5O4S
583.714000
KRJXCYSLRFJRTR-HHHXNRCGSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773656; PubChem:CID169261417
Local ready
Direct docking supported
E3L041410
BDB041410
US20250296939, Example 48
CC[C@@H]1CN(Cc2cc([C@@H](c3cnc4c(nnn4C)c3C)C(C)(C)C(=O)O)cc3ccsc23)Cc2nc(O)ccc2O1
C31H34N6O4S
586.718000
KZEHIVBQVAANNK-RLWLMLJZSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773657; PubChem:CID169261590
Local ready
Direct docking supported
E3L041411
BDB041411
US20250296939, Example 49
CC[C@@H]1CN(Cc2cc([C@H](c3cnc4c(nnn4C)c3C)C(C)(C)C(=O)O)cc3ccsc23)Cc2nc(O)ccc2O1
C31H34N6O4S
586.718000
KZEHIVBQVAANNK-QFQXNSOFSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773658; PubChem:CID169261315
Local ready
Direct docking supported
E3L041412
BDB041412
US20250296939, Example 50
Cc1c([C@H](c2cc(CN3Cc4nc(O)ccc4OC4(CC4)C3)c3sccc3c2)C(C)(C)C(=O)O)cnc2c1nnn2C
C31H32N6O4S
584.702000
AVDUZLOGQFKOFS-VWLOTQADSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773659; PubChem:CID169261217
Local ready
Direct docking supported
E3L041413
BDB041413
US20250296939, Example 51
COC(=O)C(C)(C)[C@@H](c1cc(CN2Cc3nc(O)ccc3O[C@H](C3CC3)C2)c2sccc2c1)c1cnc2c(nnn2C)c1C
C33H36N6O4S
612.756000
OUVBNPYMDSXBEN-XCZPVHLTSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773660; PubChem:CID169261399
Local ready
Direct docking supported
E3L041414
BDB041414
US20250296939, Example 52
CC[C@@H]1CN(Cc2cc([C@@H](CC(=O)O)c3ccn4c(C)nnc4c3C)cc3ccsc23)Cc2nc(O)ccc2O1
C30H31N5O4S
557.676000
PODSBBSWZLEZAA-ISKFKSNPSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773661; PubChem:CID169261459
Local ready
Direct docking supported
E3L041415
BDB041415
US20250296939, Example 52
CC[C@@H]1CN(Cc2cc([C@@H](CC(=O)O)c3ccn4c(C)nnc4c3C)cc3ccsc23)Cc2nc(O)ccc2O1
C30H31N5O4S
557.676000
PODSBBSWZLEZAA-ISKFKSNPSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773662; PubChem:CID169261459
Local ready
Direct docking supported
E3L041416
BDB041416
US20250296939, Example 54
Cc1c(C(CC(=O)O)c2cc(CN3Cc4nc(O)ccc4OC4(CC4)C3)c3sccc3c2)ccn2c(C)nnc12
C30H29N5O4S
555.660000
CKOQVODDKAMPOP-UHFFFAOYSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773663; PubChem:CID169261487
Local ready
Direct docking supported
E3L041417
BDB041417
US20250296939, Example 55
CC[C@@H]1CN(Cc2cc([C@@H](CC(=O)O)c3ccc4c(nnn4C)c3C)cc3ccsc23)Cc2nc(N)ccc2O1
C30H32N6O3S
556.692000
UMFMAVNNKPNPKA-FYYLOGMGSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773664; PubChem:CID169261412
Local ready
Direct docking supported
E3L041418
BDB041418
US20250296939, Example 56
CC[C@@H]1CN(Cc2cc([C@H](CC(=O)O)c3ccc4c(nnn4C)c3C)cc3ccsc23)Cc2nc(N)ccc2O1
C30H32N6O3S
556.692000
UMFMAVNNKPNPKA-GGAORHGYSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773665; PubChem:CID169261406
Local ready
Direct docking supported
E3L041419
BDB041419
US20250296939, Example 57
CC[C@@H]1CN(Cc2cc(C(CC(=O)O)c3ccc4c(nnn4C)c3C)cc3ccsc23)Cc2nc(F)ccc2O1
C30H30FN5O3S
559.667000
NJQUMKZHTDUGIO-FKHAVUOCSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773666; PubChem:CID169261524
Local ready
Direct docking supported
E3L041420
BDB041420
US20250296939, Example 58
Cc1c(C(CC(=O)O)c2cc(CN3Cc4nc(O)ccc4OC4(CC4)[C@H]3C)c3sccc3c2)ccc2c1nnn2C
C31H31N5O4S
569.687000
KSXFFXVOQPYRRD-FKSKYRLFSA-N Q14145 NAD(P)H dehydrogenase [quinone] 1
BindingDB, PubChem
BindingDB:BDBM773667; PubChem:CID176183286
Local ready
Direct docking supported