E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L042381
BDB042381
US12453731, Example 7
CN1CCN(c2ccc([N+](=O)[O-])cc2Nc2ncnc(Cl)c2N)CC1
C15H18ClN7O2
363.809000
OPQOTHVRDSSYJQ-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783442; PubChem:CID141755782
Local ready
Direct docking supported
E3L042382
BDB042382
US12453731, Example 23
CN1CCN(c2ccc(-c3ccc(C(=O)N4CCOCC4)cc3)cc2Nc2ncnc(Cl)c2N)CC1
C26H30ClN7O2
508.026000
FYEPWYBAIRUHTF-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783443; PubChem:CID164769778
Local ready
Direct docking supported
E3L042383
BDB042383
US12453731, Example 24
CN1CCN(c2ccc(-c3ccc(C(=O)NCCN4CCOCC4)cc3)cc2Nc2ncnc(Cl)c2N)CC1
C28H35ClN8O2
551.095000
MOQBQLRBTMTTNP-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783444; PubChem:CID163781079
Local ready
Direct docking supported
E3L042384
BDB042384
US12453731, Example 25
CN1CCN(c2ccc(-c3ccc(C(=O)NCCCN4CCOCC4)cc3)cc2Nc2ncnc(Cl)c2N)CC1
C29H37ClN8O2
565.122000
RZOPCTSAJGVMBC-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783445; PubChem:CID164769790
Local ready
Direct docking supported
E3L042385
BDB042385
US12453731, Example 26
CN1CCN(c2ccc(-c3ccc(C(=O)N(C)C)cc3)cc2Nc2ncnc(Cl)c2N)CC1
C24H28ClN7O
465.989000
SZQUBMQVFOLNKK-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783446; PubChem:CID163982518
Local ready
Direct docking supported
E3L042386
BDB042386
US12453731, Example 27
CN1CCN(C(=O)c2ccc(-c3ccc(N4CCN(C)CC4)c(Nc4ncnc(Cl)c4N)c3)cc2)CC1
C27H33ClN8O
521.069000
BNDCSLSPYZRORX-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783447; PubChem:CID164769791
Local ready
Direct docking supported
E3L042387
BDB042387
US12453731, Example 28
CN(C)CCCNC(=O)c1ccc(-c2ccc(N3CCN(C)CC3)c(Nc3ncnc(Cl)c3N)c2)cc1
C27H35ClN8O
523.085000
DYKWFQPOIDVOPM-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783448; PubChem:CID163537718
Local ready
Direct docking supported
E3L042388
BDB042388
US12453731, Example 29
CN1CCN(c2ccc(-c3ccc(C(=O)NCCN4CCCC4)cc3)cc2Nc2ncnc(Cl)c2N)CC1
C28H35ClN8O
535.096000
MIPXCQGYPLPGAY-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783449; PubChem:CID164769779
Local ready
Direct docking supported
E3L042389
BDB042389
US12453731, Example 30
CN1CCN(c2ccc(-c3ccc(C(=O)NCCCO)cc3)cc2Nc2ncnc(Cl)c2N)CC1
C25H30ClN7O2
496.015000
UBYXCZSVCSVYQQ-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783450; PubChem:CID164769795
Local ready
Direct docking supported
E3L042390
BDB042390
US12453731, Example 31
CC(C)NC(=O)c1ccc(-c2ccc(N3CCN(C)CC3)c(Nc3ncnc(Cl)c3N)c2)cc1
C25H30ClN7O
480.016000
DLNBITDSKNXQMK-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783451; PubChem:CID164769785
Local ready
Direct docking supported
E3L042391
BDB042391
US12453731, Example 32
CN1CCN(c2ccc(-c3ccc(N)cc3)cc2Nc2ncnc(Cl)c2N)CC1
C21H24ClN7
409.925000
WURJOCVDSUSNBQ-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783452; PubChem:CID141755765
Local ready
Direct docking supported
E3L042392
BDB042392
US12453731, Example 33
CN1CCN(c2ccc(-c3ccc(NC(=O)C4CCOCC4)cc3)cc2Nc2ncnc(Cl)c2N)CC1
C27H32ClN7O2
522.053000
ZNYQTNBVCYYXDE-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783453; PubChem:CID164769793
Local ready
Direct docking supported
E3L042393
BDB042393
US12453731, Example 34
CN1CCC(C(=O)Nc2ccc(-c3ccc(N4CCN(C)CC4)c(Nc4ncnc(Cl)c4N)c3)cc2)CC1
C28H35ClN8O
535.096000
ADRMGNQFAFGBJJ-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783454; PubChem:CID164769797
Local ready
Direct docking supported
E3L042394
BDB042394
US12453731, Example 35
CN1CCN(c2ccc(-c3ccc(NC(=O)C4CCCCC4)cc3)cc2Nc2ncnc(Cl)c2N)CC1
C28H34ClN7O
520.081000
BFFCPQIDLRDLAH-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783455; PubChem:CID164769789
Local ready
Direct docking supported
E3L042395
BDB042395
US12453731, Example 36
CCCC(=O)Nc1ccc(-c2ccc(N3CCN(C)CC3)c(Nc3ncnc(Cl)c3N)c2)cc1
C25H30ClN7O
480.016000
OMMVXYNQHWMPMT-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783456; PubChem:CID164769784
Local ready
Direct docking supported
E3L042396
BDB042396
US12453731, Example 37
CN1CCN(c2ccc(-c3ccc(NC(=O)c4ccccc4)cc3)cc2Nc2ncnc(Cl)c2N)CC1
C28H28ClN7O
514.033000
CXUZNEDOZWNYTP-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783457; PubChem:CID164769774
Local ready
Direct docking supported
E3L042397
BDB042397
US12453731, Example 38
CN1CCN(C(=O)c2ccc(-c3ccc(N4CCN(C)CC4)c(Nc4ncnc(Cl)c4N)c3)c(F)c2)CC1
C27H32ClFN8O
539.059000
BFABFEYKCUJGST-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783458; PubChem:CID164769775
Local ready
Direct docking supported
E3L042398
BDB042398
US12453731, Example 39
CN1CCN(c2ccc(-c3cccc(N)c3)cc2Nc2ncnc(Cl)c2N)CC1
C21H24ClN7
409.925000
KKRBTCSGFBKOAK-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783459; PubChem:CID162391116
Local ready
Direct docking supported
E3L042399
BDB042399
US12453731, Example 40
CN1CCN(c2ccc(-c3cccc(NC(=O)C4CCOCC4)c3)cc2Nc2ncnc(Cl)c2N)CC1
C27H32ClN7O2
522.053000
RHOIGEXTGUKCQT-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783460; PubChem:CID164769788
Local ready
Direct docking supported
E3L042400
BDB042400
US12453731, Example 41
CN1CCC(C(=O)Nc2cccc(-c3ccc(N4CCN(C)CC4)c(Nc4ncnc(Cl)c4N)c3)c2)CC1
C28H35ClN8O
535.096000
DMJBHQUKNVCAHX-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783461; PubChem:CID167068379
Local ready
Direct docking supported