E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L042401
BDB042401
US12453731, Example 42
COc1ccc(-c2ccc(N3CCN(C)CC3)c(Nc3ncnc(Cl)c3N)c2)cc1
C22H25ClN6O
424.936000
VSATVFWBORQUKI-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783462; PubChem:CID141755763
Local ready
Direct docking supported
E3L042402
BDB042402
US12453731, Example 43
CN1CCN(c2ccc(-c3ccoc3)cc2Nc2ncnc(Cl)c2N)CC1
C19H21ClN6O
384.871000
IWQUQAMFOYTPLX-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783463; PubChem:CID141755792
Local ready
Direct docking supported
E3L042403
BDB042403
US12453731, Example 44
CN1CCN(c2ccc(-c3cncnc3)cc2Nc2ncnc(Cl)c2N)CC1
C19H21ClN8
396.886000
PMDHDNMBHIOYJU-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783464; PubChem:CID141755762
Local ready
Direct docking supported
E3L042404
BDB042404
US12453731, Example 45
CN1CCN(c2ccc(-c3ccncc3)cc2Nc2ncnc(Cl)c2N)CC1
C20H22ClN7
395.898000
ATLRODXDTLDDGP-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783465; PubChem:CID141755811
Local ready
Direct docking supported
E3L042405
BDB042405
US12453731, Example 46
COC(=O)c1cn(-c2ccc(N3CCN(C)CC3)c(Nc3ncnc(Cl)c3N)c2)nn1
C19H22ClN9O2
443.899000
VVSHXMHKOZDWCQ-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783466; PubChem:CID141755797
Local ready
Direct docking supported
E3L042406
BDB042406
US12453731, Example 47
CN1CCN(c2ccc(-n3cc(C(=O)N4CCOCC4)nn3)cc2Nc2ncnc(Cl)c2N)CC1
C22H27ClN10O2
498.979000
WXFPDODWBQMWEE-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783467; PubChem:CID162391120
Local ready
Direct docking supported
E3L042407
BDB042407
US12453731, Example 48
CN1CCN(c2ccc(-n3cc(C(=O)NCCN4CCOCC4)nn3)cc2Nc2ncnc(Cl)c2N)CC1
C24H32ClN11O2
542.048000
VIZXROUNHQAFKL-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783468; PubChem:CID164769777
Local ready
Direct docking supported
E3L042408
BDB042408
US12453731, Example 49
CN1CCN(c2ccc(-n3cc(C(=O)NCCCN4CCOCC4)nn3)cc2Nc2ncnc(Cl)c2N)CC1
C25H34ClN11O2
556.075000
LQCPMMRMUCPMAY-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783469; PubChem:CID164769794
Local ready
Direct docking supported
E3L042409
BDB042409
US12453731, Example 50
CN1CCN(C(=O)c2cn(-c3ccc(N4CCN(C)CC4)c(Nc4ncnc(Cl)c4N)c3)nn2)CC1
C23H30ClN11O
512.022000
CMZRKDSDHQHMDD-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783470; PubChem:CID141755804
Local ready
Direct docking supported
E3L042410
BDB042410
US12453731, Example 51
CN1CCN(c2ccc(-n3cc(C(=O)N(C)C)nn3)cc2Nc2ncnc(Cl)c2N)CC1
C20H25ClN10O
456.942000
HILKZYIVPOBNJX-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783471; PubChem:CID141755814
Local ready
Direct docking supported
E3L042411
BDB042411
US12453731, Example 28
CN(C)CCCNC(=O)c1ccc(-c2ccc(N3CCN(C)CC3)c(Nc3ncnc(Cl)c3N)c2)cc1
C27H35ClN8O
523.085000
DYKWFQPOIDVOPM-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783472; PubChem:CID163537718
Local ready
Direct docking supported
E3L042412
BDB042412
US12453731, Example 53
CN1CCN(c2ccc(-n3cc(C(=O)NCCN4CCCC4)nn3)cc2Nc2ncnc(Cl)c2N)CC1
C24H32ClN11O
526.049000
MNQCUQDHLHXPJV-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783473; PubChem:CID141755775
Local ready
Direct docking supported
E3L042413
BDB042413
US12453731, Example 54
CN1CCN(c2ccc(-c3ccc(C(=O)N(C)C)cc3)c(F)c2Nc2ncnc(Cl)c2N)CC1
C24H27ClFN7O
483.979000
NQQZBAWOFFVKLO-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783474; PubChem:CID164769798
Local ready
Direct docking supported
E3L042414
BDB042414
US12453731, Example 55
CN1CCN(c2ccc(-c3ccc(C(=O)N4CCOCC4)cc3)c(F)c2Nc2ncnc(Cl)c2N)CC1
C26H29ClFN7O2
526.016000
MUZSVBKSKWILID-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783475; PubChem:CID164769801
Local ready
Direct docking supported
E3L042415
BDB042415
US12453731, Example 56
CN1CCN(c2ccc(-c3ccc(C(=O)NCCN4CCOCC4)cc3)c(F)c2Nc2ncnc(Cl)c2N)CC1
C28H34ClFN8O2
569.085000
JNTUISLXPLKGAC-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783476; PubChem:CID164769787
Local ready
Direct docking supported
E3L042416
BDB042416
US12453731, Example 57
CN1CCN(c2ccc(-c3ccc(C(=O)NCCCN4CCOCC4)cc3)c(F)c2Nc2ncnc(Cl)c2N)CC1
C29H36ClFN8O2
583.112000
HIXHYWJPYGXDEQ-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783477; PubChem:CID164769783
Local ready
Direct docking supported
E3L042417
BDB042417
US12453731, Example 58
CCN1CCN(C(=O)c2ccc(-c3ccc(N4CCN(C)CC4)c(Nc4ncnc(Cl)c4N)c3F)cc2)CC1
C28H34ClFN8O
553.086000
IXJXASUJKWAVCI-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783478; PubChem:CID164769803
Local ready
Direct docking supported
E3L042418
BDB042418
US12453731, Example 59
CN1CCN(c2ccc(-c3ccc(NC(=O)C4CCOCC4)cc3)c(F)c2Nc2ncnc(Cl)c2N)CC1
C27H31ClFN7O2
540.043000
SULMQANKWKPHFP-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783479; PubChem:CID164769781
Local ready
Direct docking supported
E3L042419
BDB042419
US12453731, Example 60
CN1CCC(C(=O)Nc2ccc(-c3ccc(N4CCN(C)CC4)c(Nc4ncnc(Cl)c4N)c3F)cc2)CC1
C28H34ClFN8O
553.086000
MLEBHCOHPRDJPI-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783480; PubChem:CID164769780
Local ready
Direct docking supported
E3L042420
BDB042420
US12453731, Example 61
CN1CCN(c2ccc(-c3ccc(NC(=O)CC4CCOCC4)cc3)c(F)c2Nc2ncnc(Cl)c2N)CC1
C28H33ClFN7O2
554.070000
OXXDBDVESZZGGA-UHFFFAOYSA-N P61964, Q03164 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM783481; PubChem:CID164769804
Local ready
Direct docking supported