E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L044661
BDB044661
BDBM50030263
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)c2ccc(C(=O)Nc3ccc4c(c3)CN(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)SCC(=O)NCCCNCCCNCCCCNCCCN)[C@H](C(=O)N[C@@H]3CCCc5ccccc53)C4)cc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C77H113N15O9S
1424.914000
ZMXKIYQYKSPEKG-ZLUZKAKLSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM50030263
Local ready
Direct docking supported
E3L044662
BDB044662
BDBM50030264
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)c2ccc(C(=O)Nc3ccc4c(c3)CN(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)SCC(=O)NCCCNCCCCNCCCN)[C@H](C(=O)N[C@@H]3CCCc5ccccc53)C4)cc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C74H106N14O9S
1367.818000
CIWSKTYTWYRRIW-ONVBUOODSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM50030264
Local ready
Direct docking supported
E3L044663
BDB044663
BDBM50030265
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)[C@H](COC)c3ccccc3)cc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C62H83N9O8
1082.401000
XZWQAFLMOTZHHO-UICOXBBFSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50030265
Local ready
Direct docking supported
E3L044664
BDB044664
BDBM50030266
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)[C@@H](COC)c3ccccc3)cc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C62H83N9O8
1082.401000
XZWQAFLMOTZHHO-DFNGJWONSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50030266
Local ready
Direct docking supported
E3L044665
BDB044665
BDBM50030267
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)[C@@H](C)c3cccc(F)c3F)cc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C61H79F2N9O7
1088.355000
XKVHXUXRQUCUTL-XNSIXTBXSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM50030267
Local ready
Direct docking supported
E3L044666
BDB044666
BDBM50030268
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)[C@H](C)c3ccccc3F)cc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C61H80FN9O7
1070.365000
SUVGZSPIXFUCLS-NQFXVQPCSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2, Baculoviral IAP repeat-containing protein 3
BindingDB
BindingDB:BDBM50030268
Local ready
Direct docking supported
E3L044667
BDB044667
BDBM50030269
CN[C@@H](C)C(=O)N[C@H](C(=O)N1C[C@@H](NC(=O)c2ccc(CN(C(=O)[C@@H]3Cc4ccccc4CN3C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)[C@H]3CCCc4ccccc43)cc2)C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C63H83N9O7
1078.413000
LDVMHSURAWAEBW-YUTDAYPPSA-N P98170, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM50030269
Local ready
Direct docking supported
E3L044668
BDB044668
BDBM50030270
CN[C@@H](C)C(=O)N[C@H](C(=O)N1Cc2cc(C(=O)Nc3ncc(C(=O)N[C@H]4C[C@@H](C(=O)N[C@@H]5CCCc6ccccc65)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C4)o3)ccc2C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C60H79N11O9
1098.360000
VYZMHQWZWYAOIA-QLYDQGARSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB
BindingDB:BDBM50030270
Local ready
Direct docking supported
E3L044669
BDB044669
BDBM50030272
CN[C@@H](C)C(=O)N[C@H](C(=O)N1Cc2cc(C(=O)Nc3nc4cc(C(=O)N[C@H]5C[C@@H](C(=O)N[C@@H]6CCCc7ccccc76)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C5)ccc4s3)ccc2C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C64H81N11O8S
1164.488000
SYZOGRWMVSXFBX-OVCCXHLHSA-N P98170, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM50030272
Local ready
Direct docking supported
E3L044670
BDB044670
BDBM50030273
CN[C@@H](C)C(=O)N[C@H](C(=O)N1Cc2cc(CCc3ccc(C(=O)N[C@H]4C[C@@H](C(=O)N[C@@H]5CCCc6ccccc65)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C4)cc3)ccc2C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C64H85N9O7
1092.440000
MRQUIOMXZIGPPW-KHFWCYFCSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM50030273
Local ready
Direct docking supported
E3L044671
BDB044671
BDBM50030275
CN[C@@H](C)C(=O)N[C@H](C(=O)N1Cc2cc(C#Cc3ccc(C(=O)N[C@H]4C[C@@H](C(=O)N[C@@H]5CCCc6ccccc65)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C4)cc3)ccc2C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C64H81N9O7
1088.408000
MZOKCLGAIIRHDG-KHFWCYFCSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB
BindingDB:BDBM50030275
Local ready
Direct docking supported
E3L044672
BDB044672
BDBM50030278
CN[C@@H](C)C(=O)N[C@H](C(=O)N1Cc2cc(OCc3ccc(C(=O)N[C@H]4C[C@@H](C(=O)N[C@@H]5CCCc6ccccc65)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C4)cc3)ccc2C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C63H83N9O8
1094.412000
PXWQVOUQYPMEME-NMZKVUILSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50030278
Local ready
Direct docking supported
E3L044673
BDB044673
BDBM50030280
CN[C@@H](C)C(=O)N[C@H](C(=O)N1Cc2cc(NC(=O)c3ccc(C(=O)N[C@H]4C[C@@H](C(=O)N[C@@H]5CCCc6ccccc65)N(C(=O)[C@@H](NC(=O)[C@H](C)NC)C(C)(C)C)C4)cc3)ccc2C[C@H]1C(=O)N[C@@H]1CCCc2ccccc21)C(C)(C)C
C63H82N10O8
1107.411000
MAKVXIUNQHYAPX-UPKUDDMJSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM50030280
Local ready
Direct docking supported
E3L044674
BDB044674
Rosiglitazone
CN(CCOc1ccc(CC2SC(=O)NC2=O)cc1)c1ccccn1
C18H19N3O3S
357.435000
YASAKCUCGLMORW-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50030474; PubChem:CID77999
Local ready
Direct docking supported
E3L044675
BDB044675
DC_05
OC(CNCCc1c[nH]c2ccccc12)Cn1c2ccccc2c2ccccc21
C25H25N3O
383.495000
LJWMTSMUQJNHOC-UHFFFAOYSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM50031317; PubChem:CID16451230
Local ready
Direct docking supported
E3L044676
BDB044676
BDBM50031332
C=C[C@H](C#CC#C[C@@H](O)/C=C\CCCCCCC)O[C@]1(C)CCC[C@]2(C)CC[C@@H](C(C)(C)O)C[C@H]21
C32H50O3
482.749000
LEAHHMLIRIMDNS-PMKWWRLWSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50031332; PubChem:CID101889826
Local ready
Direct docking supported
E3L044677
BDB044677
BDBM50031333
C=C[C@@H](O)C#CC#C[C@H](/C=C\CCCCCCC)O[C@]1(C)CCC[C@]2(C)CC[C@@H](C(C)(C)O)C[C@H]21
C32H50O3
482.749000
DIMXKINIOMBQLP-WYNAOKPBSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50031333; PubChem:CID101889825
Local ready
Direct docking supported
E3L044678
BDB044678
BDBM50031334
C=C[C@H](C#CC#C[C@@H](O)/C=C\CCCCCCC)O[C@]1(C)CC[C@@H](O)[C@]2(C)CC[C@@H](C(C)C)[C@@H](O)[C@H]21
C32H50O4
498.748000
NASVOPQXWLOMMT-QOOSENOVSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50031334; PubChem:CID101889827
Local ready
Direct docking supported
E3L044679
BDB044679
BDBM50031335
C=C[C@@H](O)C#CC#C[C@H](/C=C\CCCCCCC)OC(=O)/C=C/c1ccc(O)c(OC)c1
C27H32O5
436.548000
OECWBZDIEAHTKW-LGDYLFJGSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50031335; PubChem:CID101889829
Local ready
Direct docking supported
E3L044680
BDB044680
BDBM50031336
C=C[C@H]1OCc2cc3cc(OC)c(O)cc3c(C#C[C@@H](O)/C=C\CCCCCCC)c21
C27H32O4
420.549000
NQXRXJUTUMEEQI-VPXVCDLISA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50031336; PubChem:CID101889828
Local ready
Direct docking supported