E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L049161
BDB049161
BDBM50234692
O=C(O)c1[nH]c2cc(Cl)ccc2c1C(NCc1ccc(Cl)cc1)c1nnnn1Cc1ccc(Cl)cc1
C25H19Cl3N6O2
541.826000
KFCWUSMXFROILL-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50234692; PubChem:CID137655549
Local ready
Direct docking supported
E3L049162
BDB049162
BDBM50234693
CC(C)c1ccc(-n2nnnc2C(NCC2CCCCC2)c2c(C(=O)O)[nH]c3cc(Cl)ccc23)cc1
C27H31ClN6O2
507.038000
YNOYOVAHFMDVDF-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50234693; PubChem:CID137645566
Local ready
Direct docking supported
E3L049163
BDB049163
BDBM50234694
O=C(O)c1[nH]c2cc(Cl)ccc2c1C(NC1CCCCC1)c1nnnn1-c1cccc(Oc2ccccc2)c1
C29H27ClN6O3
543.027000
VBBBINIGZGMQJY-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50234694; PubChem:CID137649150
Local ready
Direct docking supported
E3L049164
BDB049164
BDBM50234695
CCOC(=O)c1[nH]c2cc(Cl)ccc2c1C(NCC1CCCCC1)c1nnnn1Cc1ccc(OCc2ccccc2F)cc1
C34H36ClFN6O3
631.152000
TXXXBOUIDRPXRE-UHFFFAOYSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM50234695; PubChem:CID137633360
Local ready
Direct docking supported
E3L049165
BDB049165
BDBM50234696
CCCCCNC(c1c(C(=O)O)[nH]c2cc(Cl)ccc12)c1nnnn1Cc1ccc(OCc2ccccc2Br)cc1
C30H30BrClN6O3
637.966000
BFKBNEAKERECKC-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50234696; PubChem:CID137651734
Local ready
Direct docking supported
E3L049166
BDB049166
BDBM50234697
CCCCCNC(c1c(C(=O)O)[nH]c2cc(Cl)ccc12)c1nnnn1Cc1ccc(OCc2ccccc2Cl)cc1
C30H30Cl2N6O3
593.515000
SYKXNHHLQVLQAQ-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50234697; PubChem:CID137638070
Local ready
Direct docking supported
E3L049167
BDB049167
BDBM50234698
O=C(O)c1[nH]c2cc(Cl)ccc2c1C(NCC1CCCCC1)c1nnnn1-c1ccc(OCc2ccc(Br)cc2)cc1
C31H30BrClN6O3
649.977000
CAPPOVCTBGRMBC-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50234698; PubChem:CID137641354
Local ready
Direct docking supported
E3L049168
BDB049168
BDBM50234699
CCCCCNC(c1c(C(=O)O)[nH]c2cc(Cl)ccc12)c1nnnn1-c1ccc(OCc2ccccc2Br)cc1
C29H28BrClN6O3
623.939000
VPPUTUBGIUQPRD-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50234699; PubChem:CID137658988
Local ready
Direct docking supported
E3L049169
BDB049169
BDBM50234700
O=C(O)c1[nH]c2cc(Cl)ccc2c1C(NC1CCCCCC1)c1nnnn1-c1cccc(OCc2ccccc2)c1
C31H31ClN6O3
571.081000
HJIBNGCUBFYPMB-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50234700; PubChem:CID137637822
Local ready
Direct docking supported
E3L049170
BDB049170
BDBM50234915
Cc1cccc2c(=O)[nH]c(CCC(=O)Nc3ccc(C(=O)Nc4cccc5cccnc45)cc3)nc12
C28H23N5O3
477.524000
VADYPHREEXKWAX-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50234915; PubChem:CID135567126
Local ready
Direct docking supported
E3L049171
BDB049171
BDBM50234916
O=C(CCc1nc2ccccc2c(=O)[nH]1)Nc1ccc(C(=O)Nc2cccc3cccnc23)cc1
C27H21N5O3
463.497000
HILQRGHXDPSDBM-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50234916; PubChem:CID135567125
Local ready
Direct docking supported
E3L049172
BDB049172
3-(8-methyl-4-oxo-3H-quinazolin-2-yl)propanoic acid
Cc1cccc2c(=O)[nH]c(CCC(=O)O)nc12
C12H12N2O3
232.239000
OOIMOZIUYZYXLA-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50234917; PubChem:CID136404917
Local ready
Direct docking supported
E3L049173
BDB049173
4-amino-N-(quinolin-8-yl)benzamide
Nc1ccc(C(=O)Nc2cccc3cccnc23)cc1
C16H13N3O
263.300000
BUBAMNUHSKQIEN-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50234918; PubChem:CID6490174
Local ready
Direct docking supported
E3L049174
BDB049174
BDBM50234919
O=C(Nc1cccc2cccnc12)c1ccc(N2C(=O)[C@@H]3[C@@H]4CC[C@@H](C4)[C@@H]3C2=O)cc1
C25H21N3O3
411.461000
LFGACFGWTJMDPZ-ALFLXDJESA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50234919; PubChem:CID56587957
Local ready
Direct docking supported
E3L049175
BDB049175
BDBM50234921
O=C1SCCc2nc(-c3ccc(C(F)(F)F)cc3)[nH]c(=O)c21
C14H9F3N2O2S
326.299000
YAAIOGGCMLWOPM-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50234921; PubChem:CID137637696
Local ready
Direct docking supported
E3L049176
BDB049176
3-(4-Oxo-3,4-dihydro-quinazolin-2-yl)-propionic acid
O=C(O)CCc1nc(O)c2ccccc2n1
C11H10N2O3
218.212000
HYSISEGNFBAVMJ-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50234922; PubChem:CID135449434
Local ready
Direct docking supported
E3L049177
BDB049177
Gsk4027
CN1C[C@H](Nc2cnn(C)c(=O)c2Br)C[C@H](c2ccccc2)C1
C17H21BrN4O
377.286000
VZAFGXCWAWRULT-UONOGXRCSA-N Q12830, Q92831 Histone acetyltransferase KAT2B, Nucleosome-remodeling factor subunit BPTF
BindingDB, PubChem
BindingDB:BDBM50234923; PubChem:CID126961735
Local ready
Direct docking supported
E3L049178
BDB049178
4-Chloro-2-methyl-5-(phenylamino)pyridazin-3(2H)-one
Cn1ncc(Nc2ccccc2)c(Cl)c1=O
C11H10ClN3O
235.674000
DWVFDRCVLQRHME-UHFFFAOYSA-N Q12830, Q92831 Histone acetyltransferase KAT2B, Nucleosome-remodeling factor subunit BPTF
BindingDB, PubChem
BindingDB:BDBM50234924; PubChem:CID137634095
Local ready
Direct docking supported
E3L049179
BDB049179
4-Chloro-2-methyl-5-(3-methylanilino)pyridazin-3-one
Cc1cccc(Nc2cnn(C)c(=O)c2Cl)c1
C12H12ClN3O
249.701000
NFUYTCBSSVZVDF-UHFFFAOYSA-N Q92831 Histone acetyltransferase KAT2B
BindingDB, PubChem
BindingDB:BDBM50234925; PubChem:CID137654127
Local ready
Direct docking supported
E3L049180
BDB049180
BDBM50234926
CN1CCc2c(cccc2Nc2cnn(C)c(=O)c2Cl)C1
C15H17ClN4O
304.781000
YJJYUKCKKSVTAG-UHFFFAOYSA-N Q92831 Histone acetyltransferase KAT2B
BindingDB, PubChem
BindingDB:BDBM50234926; PubChem:CID131953422
Local ready
Direct docking supported