E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L049461
BDB049461
BDBM50239420
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3cnc(Cc4ccc(F)cc4F)cc32)[C@@H](CN2CCCC2=O)CN1
C28H35F2N5O2
511.617000
ZAODVPPYEXRUJI-XMSQKQJNSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50239420; PubChem:CID90232180
Local ready
Direct docking supported
E3L049462
BDB049462
BDBM50239421
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3ncc(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCCC2=O)CN1
C28H36FN5O2
493.627000
PLUURWYWSCCXKK-AUSIDOKSSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM50239421; PubChem:CID90232202
Local ready
Direct docking supported
E3L049463
BDB049463
BDBM50239422
CC[C@H](C)[C@H](NC(=O)[C@@H]1CCCN1C(=O)[C@@H](NC(=O)[C@H](C)N)C(C)C)C(=O)O
C19H34N4O5
398.504000
YARBOBGBIYUVQB-YTFOTSKYSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM50239422; PubChem:CID10222526
Local ready
Direct docking supported
E3L049464
BDB049464
BDBM50239423
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3ncc(C(F)(F)c4ccccc4)cc32)[C@@H](CN2CCCC2=O)CN1
C28H35F2N5O2
511.617000
HWWPTUIPLTUDQJ-DENIHFKCSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM50239423; PubChem:CID90232119
Local ready
Direct docking supported
E3L049465
BDB049465
BDBM50239424
CCCC(F)(F)c1cnc2c(c1)N(C(=O)CN1C[C@@H](C)NC[C@@H]1CN1CCCC1=O)CC2(C)C
C25H37F2N5O2
477.600000
OWKVMNZTKAZLGY-IEBWSBKVSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM50239424; PubChem:CID90232165
Local ready
Direct docking supported
E3L049466
BDB049466
6-Amino-1-ethyl-1,2,3,4-tetrahydropyrimidine-2,4-dione
CCn1c(N)cc(=O)[nH]c1=O
C6H9N3O2
155.157000
QHEMDIZENXAVRQ-UHFFFAOYSA-N Q12830 Nucleosome-remodeling factor subunit BPTF
BindingDB, PubChem
BindingDB:BDBM50239563; PubChem:CID853899
Local ready
Direct docking supported
E3L049467
BDB049467
Apomorphine o-quinone
CN1CCc2cccc3c4c(cc1c23)C=CC(=O)C4=O
C17H13NO2
263.296000
DZZIOGKZAPZOCK-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50240295; PubChem:CID10015619
Local ready
Direct docking supported
E3L049468
BDB049468
H-Leu-Thr-Phe-Glu-His-Tyr-Trp-Ala-Gln-Leu-Thr-Ser-NH2
CC(C)C[C@H](NC(=O)[C@H](CCC(N)=O)NC(=O)[C@H](C)NC(=O)[C@H](Cc1c[nH]c2ccccc12)NC(=O)[C@H](Cc1ccc(O)cc1)NC(=O)[C@H](Cc1cnc[nH]1)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@@H](NC(=O)[C@@H](N)CC(C)C)[C@@H](C)O)C(=O)N[C@H](C(=O)N[C@@H](CO)C(N)=O)[C@@H](C)O
C71H99N17O19
1494.673000
JZLDUGZOHRDLMR-MQEOCOHRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50240296; PubChem:CID137653137
Local ready
Direct docking supported
E3L049469
BDB049469
9,12,15-cis-Octadecatrienoic acid
CCC=CCC=CC/C=C\CCCCCCCC(=O)O
C18H30O2
278.436000
DTOSIQBPPRVQHS-NKIRVBODSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50240347; PubChem:CID445640
Local ready
Direct docking supported
E3L049470
BDB049470
Anacardic Acid
CCCCCCCCCCCCCCCc1cccc(O)c1C(=O)O
C22H36O3
348.527000
ADFWQBGTDJIESE-UHFFFAOYSA-N P37231, Q07869, Q09472, Q92831 Histone acetyltransferase p300, Histone acetyltransferase KAT2B, Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50240436; PubChem:CID167551
Local ready
Direct docking supported
E3L049471
BDB049471
Mifobate
COP(=O)(OC)OC(c1ccc(Cl)cc1)P(=O)(OC)OC
C11H17ClO7P2
358.651000
VQHUQHAPWMNBLP-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50240444; PubChem:CID60910
Local ready
Direct docking supported
E3L049472
BDB049472
Trp-Glu
N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCC(=O)O)C(=O)O
C16H19N3O5
333.344000
PWIQCLSQVQBOQV-AAEUAGOBSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50240464; PubChem:CID7009663
Local ready
Direct docking supported
E3L049473
BDB049473
Stearic Acid
CCCCCCCCCCCCCCCCCC(=O)O
C18H36O2
284.484000
QIQXTHQIDYTFRH-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50240485; PubChem:CID5281
Local ready
Direct docking supported
E3L049474
BDB049474
BDBM50240586
CC[C@H](NC)C(=O)N[C@@H]1C(=O)N2[C@@H](CC[C@@H]1CNC(=O)c1ccccc1)CC[C@H]2C(=O)N[C@H](C(=O)NCCN(Cc1ccccn1)Cc1ccccn1)c1ccccc1
C45H55N9O5
801.993000
YEVVNGCYGSNANK-JMGPKLEYSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50240586
Local ready
Direct docking supported
E3L049475
BDB049475
BDBM50240587
CC[C@H](NC)C(=O)N[C@@H]1C(=O)N2[C@@H](CC[C@@H]1CNC(=O)CCNC(=O)CN(Cc1ccccn1)Cc1ccccn1)CC[C@H]2C(=O)NC(c1ccccc1)c1ccccc1
C46H57N9O5
816.020000
JTXRTFXANHGCBX-PZOHKCEOSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50240587
Local ready
Direct docking supported
E3L049476
BDB049476
BDBM50240588
CC[C@H](NC)C(=O)N[C@@H]1C(=O)N2[C@@H](CC[C@@H]1CNC(=O)CCCCCCCCCCNC(=O)CN(Cc1ccccn1)Cc1ccccn1)CC[C@H]2C(=O)NC(c1ccccc1)c1ccccc1
C54H73N9O5
928.236000
YALDJLQKTJMMHH-ZSOGPSSESA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50240588
Local ready
Direct docking supported
E3L049477
BDB049477
BDBM50240589
CC[C@H](NC)C(=O)N[C@@H]1C(=O)N2[C@@H](CC[C@@H]1CNC(=O)CN(Cc1ccccn1)Cc1ccccn1)CC[C@H]2C(=O)NC(c1ccccc1)c1ccccc1
C43H52N8O4
744.941000
BNYYCCFVGJGUPF-QBWLCKSBSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50240589
Local ready
Direct docking supported
E3L049478
BDB049478
BDBM50240592
CC[C@H](NC)C(=O)N[C@@H]1C(=O)N2[C@@H](CC[C@@H]1CNC(=O)COCCOCCNC(=O)CN(Cc1ccccn1)Cc1ccccn1)CC[C@H]2C(=O)NC(c1ccccc1)c1ccccc1
C49H63N9O7
890.099000
RDXYKWDWLUKGKW-OXQSLEPPSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50240592
Local ready
Direct docking supported
E3L049479
BDB049479
2-Phenylisothiazol-3(2H)-one
O=c1ccsn1-c1ccccc1
C9H7NOS
177.228000
VFUQPOSQUAVDEZ-UHFFFAOYSA-N Q09472, Q92831 Histone acetyltransferase KAT2B, Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50240683; PubChem:CID11052198
Local ready
Direct docking supported
E3L049480
BDB049480
BDBM50240768
COC(=O)C1Cc2ccc(OCCc3nc(-c4ccccc4)oc3C)cc2OC1=O
C23H21NO6
407.422000
JRQPPTMEDCUEQR-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50240768; PubChem:CID11742116
Local ready
Direct docking supported