E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L049481
BDB049481
(1R,2S)-Tranylcypromine
N[C@@H]1C[C@H]1c1ccccc1
C9H11N
133.194000
AELCINSCMGFISI-DTWKUNHWSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50240772; PubChem:CID19493
Local ready
Direct docking supported
E3L049482
BDB049482
8,9-Dimethoxy-1,2,3,4,5-benzopentathiepin-6-ethanamine
COc1cc(CCN)c2c(c1OC)SSSSS2
C10H13NO2S5
339.554000
HIKCOAGMCNIBMP-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50240848; PubChem:CID179269
Local ready
Direct docking supported
E3L049483
BDB049483
Bimiralisib
Nc1cc(C(F)(F)F)c(-c2nc(N3CCOCC3)nc(N3CCOCC3)n2)cn1
C17H20F3N7O2
411.388000
ADGGYDAFIHSYFI-UHFFFAOYSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM50240975; PubChem:CID58507717
Local ready
Direct docking supported
E3L049484
BDB049484
BDBM50240980
O=C(Nc1cccc(Cc2n[nH]c(=O)c3ccccc23)c1)c1ccc(-c2ccsc2)s1
C24H17N3O2S2
443.553000
MFMIZBCYOYSYCP-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50240980; PubChem:CID44402172
Local ready
Direct docking supported
E3L049485
BDB049485
GW-610
COc1ccc(-c2nc3cc(F)ccc3s2)cc1OC
C15H12FNO2S
289.331000
ZRLSVQBGBBYEAZ-UHFFFAOYSA-N P35869 Aryl hydrocarbon receptor
BindingDB, PubChem
BindingDB:BDBM50240990; PubChem:CID6712941
Local ready
Direct docking supported
E3L049486
BDB049486
Barasertib
CCN(CCCOc1ccc2c(Nc3cc(CC(=O)Nc4cccc(F)c4)n[nH]3)ncnc2c1)CCOP(=O)(O)O
C26H31FN7O6P
587.549000
GBJVVSCPOBPEIT-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50241089; PubChem:CID11497983
Local ready
Direct docking supported
E3L049487
BDB049487
BDBM50241116
CC(C)(C)c1ccc(C(=O)NCc2ccc(NS(C)(=O)=O)cc2Cl)cc1
C19H23ClN2O3S
394.924000
IMPXBWVTYSVBEU-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50241116; PubChem:CID137631891
Local ready
Direct docking supported
E3L049488
BDB049488
2-Methyl-4(3H)-quinazolinone
Cc1nc2ccccc2c(=O)[nH]1
C9H8N2O
160.176000
FIEYHAAMDAPVCH-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50241202; PubChem:CID135400457
Local ready
Direct docking supported
E3L049489
BDB049489
Bisphenol A diglycidyl ether
CC(C)(c1ccc(OCC2CO2)cc1)c1ccc(OCC2CO2)cc1
C21H24O4
340.419000
LCFVJGUPQDGYKZ-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50241439; PubChem:CID2286
Local ready
Direct docking supported
E3L049490
BDB049490
Methylene blue cation
CN(C)c1ccc2nc3ccc(=[N+](C)C)cc-3sc2c1
C16H18N3S+
284.408000
RBTBFTRPCNLSDE-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM50241461; PubChem:CID4139
Local ready
Direct docking supported
E3L049491
BDB049491
BDBM50241616
CCOc1cc(/C=C2\C(=O)N(c3ccccc3)N=C2C)cc(Cl)c1OCC(=O)OC
C22H21ClN2O5
428.872000
RKKFQJXGAQWHBZ-YVLHZVERSA-N O15151, Q00987 Protein Mdm4, E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50241616; PubChem:CID1317466
Local ready
Direct docking supported
E3L049492
BDB049492
BDBM50241617
CC(CC(=O)N[C@@H](Cc1ccc(OCCCNc2ccccn2)cc1)C(=O)O)c1ccccc1
C27H31N3O4
461.562000
HZDAQXMGNYLXAY-JWIMYKKASA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM50241617; PubChem:CID137633285
Local ready
Direct docking supported
E3L049493
BDB049493
BDBM50241618
O=C(CC(c1ccccc1)c1ccccc1)N[C@@H](Cc1ccc(OCc2ccccc2)cc1)C(=O)O
C31H29NO4
479.576000
GTHARARCIGECKR-LJAQVGFWSA-N O15151, Q00987 Protein Mdm4, E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50241618; PubChem:CID137637908
Local ready
Direct docking supported
E3L049494
BDB049494
BDBM50241619
CC(C)(C)Oc1ccc(C[C@H](NC(=O)CC(c2ccccc2)c2ccccc2)C(=O)O)cc1
C28H31NO4
445.559000
CGEBZHJGMWQTHE-VWLOTQADSA-N O15151, Q00987 Protein Mdm4, E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50241619; PubChem:CID137653948
Local ready
Direct docking supported
E3L049495
BDB049495
BDBM50241620
Nc1ccc(C[C@H](NC(=O)CC(c2ccccc2)c2ccccc2)C(=O)O)cc1
C24H24N2O3
388.467000
GQVXJYYWXOHGHE-QFIPXVFZSA-N O15151, Q00987 Protein Mdm4, E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50241620; PubChem:CID137640724
Local ready
Direct docking supported
E3L049496
BDB049496
BDBM50241621
O=C(CC(c1ccccc1)c1ccccc1)N[C@@H](Cc1ccc(Cl)cc1)C(=O)O
C24H22ClNO3
407.897000
GPUXNVYHKPLPND-QFIPXVFZSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM50241621; PubChem:CID137655459
Local ready
Direct docking supported
E3L049497
BDB049497
BDBM50241622
O=C(CC(c1ccccc1)c1ccccc1)N[C@@H](Cc1ccccc1)C(=O)O
C24H23NO3
373.452000
OKPOWHJBMXCHGA-QFIPXVFZSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM50241622; PubChem:CID122689625
Local ready
Direct docking supported
E3L049498
BDB049498
BDBM50241623
O=C(CC(c1ccccc1)c1ccccc1)N[C@H](Cc1ccc(O)cc1)C(=O)O
C24H23NO4
389.451000
NTJVCYLHJRYAHT-JOCHJYFZSA-N O15151, Q00987 Protein Mdm4, E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50241623; PubChem:CID137657022
Local ready
Direct docking supported
E3L049499
BDB049499
BDBM50241626
COC(=O)[C@H](Cc1ccc(O)cc1)NC(=O)CC(c1ccccc1)c1ccccc1
C25H25NO4
403.478000
QOVUJXDGZUQNAV-QHCPKHFHSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM50241626; PubChem:CID137646640
Local ready
Direct docking supported
E3L049500
BDB049500
BDBM50241627
COC(=O)[C@H](Cc1ccc(O)cc1)NC(=O)CC(c1ccccc1)(c1ccccc1)c1ccccc1
C31H29NO4
479.576000
YNZYXAGVJDCNTE-NDEPHWFRSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM50241627; PubChem:CID137656534
Local ready
Direct docking supported