E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L049621
BDB049621
BDBM50245002
CN1CCCC1CCOC(c1cc2nccc(C(=O)O)c2[nH]1)c1ccccc1Cl
C22H24ClN3O3
413.905000
FLCRYTPTFPDXRU-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50245002; PubChem:CID133053821
Local ready
Direct docking supported
E3L049622
BDB049622
BDBM50245003
O=C(O)c1ccnc2cc(C(OCCCN3CCCCC3)c3ccccc3Cl)[nH]c12
C23H26ClN3O3
427.932000
MNARMTUGWVPRGA-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50245003; PubChem:CID137632245
Local ready
Direct docking supported
E3L049623
BDB049623
BDBM50245004
O=C(O)c1ccnc2cc(C(OCCN3CCCCC3)c3ccccc3Cl)[nH]c12
C22H24ClN3O3
413.905000
AWPYWZMMJZGPOX-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50245004; PubChem:CID133053891
Local ready
Direct docking supported
E3L049624
BDB049624
BDBM50245005
O=C(O)c1ccnc2cc(C(OCCN3CCC(F)(F)CC3)c3ccccc3Cl)[nH]c12
C22H22ClF2N3O3
449.885000
QCUMGQXPGZQHID-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50245005; PubChem:CID137640082
Local ready
Direct docking supported
E3L049625
BDB049625
BDBM50245006
Cn1ccnc1CCOC(c1cc2nccc(C(=O)O)c2[nH]1)c1ccccc1Cl
C21H19ClN4O3
410.861000
ULBCSYUKODTPKF-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50245006; PubChem:CID133053810
Local ready
Direct docking supported
E3L049626
BDB049626
BDBM50245037
O=C(O)c1ccnc2cc([C@H](OCCN3CCCCC3)c3ccccc3Cl)[nH]c12
C22H24ClN3O3
413.905000
AWPYWZMMJZGPOX-OAQYLSRUSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50245037; PubChem:CID132472263
Local ready
Direct docking supported
E3L049627
BDB049627
BDBM50245115
CCCCN1CCC(N(Cc2ccccc2)C(=O)Nc2cccc(C)c2)CC1
C24H33N3O
379.548000
KUDNERVUESMHKM-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245115; PubChem:CID126711507
Local ready
Direct docking supported
E3L049628
BDB049628
BDBM50245116
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2cccc(F)c2)CC1
C24H32FN3O
397.538000
PQEXXPWNZCGFOQ-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245116; PubChem:CID126711332
Local ready
Direct docking supported
E3L049629
BDB049629
BDBM50245117
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2cccc(Cl)c2)CC1
C24H32ClN3O
413.993000
MYNXIBZEDHDYAQ-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245117; PubChem:CID126711727
Local ready
Direct docking supported
E3L049630
BDB049630
BDBM50245118
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2ccc(C(F)(F)F)cc2)CC1
C25H32F3N3O
447.545000
IBAWSEGSLHAMDB-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245118; PubChem:CID126711499
Local ready
Direct docking supported
E3L049631
BDB049631
BDBM50245130
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2ccc(Cl)cc2)CC1
C24H32ClN3O
413.993000
CDBZANQVCKRWKL-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245130; PubChem:CID126711572
Local ready
Direct docking supported
E3L049632
BDB049632
BDBM50245131
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2ccc(Br)cc2)CC1
C24H32BrN3O
458.444000
FFBKFICENZIZPC-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245131; PubChem:CID126711301
Local ready
Direct docking supported
E3L049633
BDB049633
BDBM50245132
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2ccc(C)cc2)CC1
C25H35N3O
393.575000
HVJBCODDQCCKCO-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245132; PubChem:CID126711502
Local ready
Direct docking supported
E3L049634
BDB049634
BDBM50245133
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2ccc(C(C)C)cc2)CC1
C27H39N3O
421.629000
JGOTYFCURQUEFN-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245133; PubChem:CID126711334
Local ready
Direct docking supported
E3L049635
BDB049635
BDBM50245139
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2ccc(C(C)(C)C)cc2)CC1
C28H41N3O
435.656000
ZFHWLTQMRUJRCA-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245139; PubChem:CID126711698
Local ready
Direct docking supported
E3L049636
BDB049636
BDBM50245140
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2ccc(Cl)c([N+](=O)[O-])c2)CC1
C24H31ClN4O3
458.990000
WVFXWULPBNOGRJ-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245140; PubChem:CID137657040
Local ready
Direct docking supported
E3L049637
BDB049637
BDBM50245141
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2ccc(F)c(F)c2)CC1
C24H31F2N3O
415.528000
KFGVTSJDQVXIPB-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245141; PubChem:CID126711224
Local ready
Direct docking supported
E3L049638
BDB049638
BDBM50245142
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2ccc(C#N)c(C(F)(F)F)c2)CC1
C26H31F3N4O
472.555000
KNXFGMRPYKWMTO-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245142; PubChem:CID126711265
Local ready
Direct docking supported
E3L049639
BDB049639
BDBM50245143
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2ccc(F)c(C(F)(F)F)c2)CC1
C25H31F4N3O
465.535000
PUGFYUZFEDYUNK-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245143; PubChem:CID126711316
Local ready
Direct docking supported
E3L049640
BDB049640
BDBM50245148
CCCC(C)N1CCC(N(Cc2ccccc2)C(=O)Nc2cc(F)cc(C(F)(F)F)c2)CC1
C25H31F4N3O
465.535000
JREQKSIAJGFHSM-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50245148; PubChem:CID126711297
Local ready
Direct docking supported