E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L050381
BDB050381
BDBM50266598
COC(=O)C1Cc2ccc(OCCc3nc(-c4cccc(F)c4)oc3C)cc2OC1=O
C23H20FNO6
425.412000
OMTCUYMKWWBDJU-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50266598; PubChem:CID25147840
Local ready
Direct docking supported
E3L050382
BDB050382
BDBM50266609
COC(=O)c1cc2ccc(OCCc3nc(-c4cccc([N+](=O)[O-])c4)oc3C)cc2oc1=O
C23H18N2O8
450.403000
YLDFFMCYPPMSHA-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50266609; PubChem:CID25149128
Local ready
Direct docking supported
E3L050383
BDB050383
Trp-Asp
N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CC(=O)O)C(=O)O
C15H17N3O5
319.317000
PEEAINPHPNDNGE-JQWIXIFHSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50266632; PubChem:CID7019108
Local ready
Direct docking supported
E3L050384
BDB050384
L-Tryptophan-L-2-aminoadipic acid
N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCCC(=O)O)C(=O)O
C17H21N3O5
347.371000
LKKDYAZRMNSFJN-JSGCOSHPSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50266633; PubChem:CID25185696
Local ready
Direct docking supported
E3L050385
BDB050385
Trp-Gln
NC(=O)CC[C@H](NC(=O)[C@@H](N)Cc1c[nH]c2ccccc12)C(=O)O
C16H20N4O4
332.360000
NZCPCJCJZHKFGZ-AAEUAGOBSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50266654; PubChem:CID25187914
Local ready
Direct docking supported
E3L050386
BDB050386
BDBM50266679
NC(=O)C[C@H](NC(=O)[C@@H](N)Cc1c[nH]c2ccccc12)C(=O)O
C15H18N4O4
318.333000
GRQCSEWEPIHLBI-JQWIXIFHSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50266679; PubChem:CID7020169
Local ready
Direct docking supported
E3L050387
BDB050387
Trp-Arg
NC(N)=NCCC[C@H](NC(=O)[C@@H](N)Cc1c[nH]c2ccccc12)C(=O)O
C17H24N6O3
360.418000
LCPVBXOHXMBLFW-JSGCOSHPSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50266680; PubChem:CID25186251
Local ready
Direct docking supported
E3L050388
BDB050388
BDBM50266681
CC(C)C[C@H](NC(=O)[C@@H](N)Cc1c[nH]c2ccccc12)C(=O)O
C17H23N3O3
317.389000
LYMVXFSTACVOLP-ZFWWWQNUSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB
BindingDB:BDBM50266681
Local ready
Direct docking supported
E3L050389
BDB050389
5-fluoro-4-N-phenylpyrimidine-2,4-diamine
Nc1ncc(F)c(Nc2ccccc2)n1
C10H9FN4
204.208000
GCJMBIZQSVAOHI-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50266777; PubChem:CID80768541
Local ready
Direct docking supported
E3L050390
BDB050390
5-Chloro-N4-Phenylpyrimidine-2,4-Diamine
Nc1ncc(Cl)c(Nc2ccccc2)n1
C10H9ClN4
220.663000
FRISIUXBSNAYFR-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50266778; PubChem:CID80769364
Local ready
Direct docking supported
E3L050391
BDB050391
BDBM50266779
O=C1Cc2cc(Nc3ncncc3Cl)ccc2N1
C12H9ClN4O
260.684000
XGLOINXVRYWOSM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50266779; PubChem:CID133516862
Local ready
Direct docking supported
E3L050392
BDB050392
Bcl6-IN-7
O=C1Cc2cc(Nc3nc(NCc4cccnc4)ncc3Cl)ccc2N1
C18H15ClN6O
366.812000
MUSYPBPUEKXCSS-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50266780; PubChem:CID137348674
Local ready
Direct docking supported
E3L050393
BDB050393
BDBM50266781
CC[C@H](C)[C@H](NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CO)NC(=O)[C@H](CCCNC(=N)N)NC(C)=O)C(=O)N[C@H](C(=O)N[C@@H](CO)C(=O)N[C@H](C(=O)N[C@@H](C)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CO)C(=O)N[C@@H](CO)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@H](C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCCN)C(=O)O)C(C)C)C(C)C)[C@@H](C)O)[C@@H](C)CC
C86H138N22O26
1896.178000
SSPAWWBQGOLZSF-HGEPLHJBSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50266781; PubChem:CID137638505
Local ready
Direct docking supported
E3L050394
BDB050394
Amanozine
Nc1ncnc(Nc2ccccc2)n1
C9H9N5
187.206000
YMFGJWGABDOFID-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50266782; PubChem:CID10832
Local ready
Direct docking supported
E3L050395
BDB050395
BDBM50266870
O=C(O)CCC(=O)NCCOC(=O)c1[nH]c2cc(Cl)ccc2c1-c1c(-c2ccc(F)cc2)ncn1Cc1ccc(Cl)cc1
C31H25Cl2FN4O5
623.468000
ZOERUEHADULHNT-UHFFFAOYSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM50266870; PubChem:CID137658136
Local ready
Direct docking supported
E3L050396
BDB050396
BDBM50266876
O=C(O)CCC(=O)NCCCCCCOC(=O)c1[nH]c2cc(Cl)ccc2c1-c1c(-c2ccc(F)cc2)ncn1Cc1ccc(Cl)cc1
C35H33Cl2FN4O5
679.576000
MEJMFPQUMDEAQP-UHFFFAOYSA-N O15151, Q00987 Protein Mdm4, E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50266876; PubChem:CID126963310
Local ready
Direct docking supported
E3L050397
BDB050397
BDBM50266877
O=C(O)c1[nH]c2cc(Cl)ccc2c1-c1c(-c2ccc(F)cc2)ncn1Cc1ccc(F)c(F)c1
C25H15ClF3N3O2
481.861000
AWQSVYZFVWIJTA-UHFFFAOYSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM50266877; PubChem:CID137661621
Local ready
Direct docking supported
E3L050398
BDB050398
BDBM50266878
O=C(O)c1[nH]c2cc(Cl)ccc2c1-c1c(-c2ccc(F)cc2)ncn1Cc1ccc(Cl)cc1
C25H16Cl2FN3O2
480.326000
NWNGVZPSPZEVFZ-UHFFFAOYSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM50266878; PubChem:CID66987552
Local ready
Direct docking supported
E3L050399
BDB050399
BDBM50266879
O=C(O)c1ccc(CNC(=O)c2[nH]c3cc(Cl)ccc3c2-c2c(-c3ccc(F)cc3)ncn2Cc2ccc(Cl)cc2)cc1
C33H23Cl2FN4O3
613.476000
GXZQCNPQFJYAAT-UHFFFAOYSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM50266879; PubChem:CID137639153
Local ready
Direct docking supported
E3L050400
BDB050400
BDBM50266880
NNC(=O)CCCCCCCCCOC(=O)c1[nH]c2cc(Cl)ccc2c1-c1c(-c2ccc(F)cc2)ncn1Cc1ccc(Cl)cc1
C35H36Cl2FN5O3
664.609000
IOTOJMCWWZHEMH-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50266880; PubChem:CID137629599
Local ready
Direct docking supported