E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L056081
BDB056081
BDBM50436048
CC(C)(C)NC(=O)C(c1c(C(=O)O)[nH]c2cc(Cl)ccc12)N(C=O)Cc1ccc(F)c(F)c1
C23H22ClF2N3O4
477.895000
AGRQHAQMUFKJFC-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50436048; PubChem:CID53470410
Local ready
Direct docking supported
E3L056082
BDB056082
BDBM50436049
O=C1Nc2ccc(I)cc2C(=O)N([C@@H](C(=O)O)c2ccc(Cl)cc2)[C@H]1c1ccc(Cl)cc1
C23H15Cl2IN2O4
581.193000
HQEQUYKKMMKSSX-VQTJNVASSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50436049; PubChem:CID73347446
Local ready
Direct docking supported
E3L056083
BDB056083
BDBM50436050
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCCN2CCOCC2)[C@@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C29H35Cl2FN4O3
577.528000
YTBYOWZWBDYLQF-BYHVZLFPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436050
Local ready
Direct docking supported
E3L056084
BDB056084
BDBM50436121
CC(C)C[C@@H](NC(=O)[C@@H](CCC(N)=O)NC(=O)[C@H](N)Cc1cnc[nH]1)C(=O)N[C@@H]1CSSC[C@H]2NC(=O)[C@@H](CCCCN)NC(=O)[C@@H](C)NC(=O)[C@H]3CCCN3C(=O)[C@@H](CCC(=O)O)NC(=O)[C@@H]([C@H](C)O)NC(=O)[C@@H](Cc3ccccc3)NC(=O)[C@@H](CC(C)C)NC(=O)[C@@H](CSSC[C@H](C(=O)O)NC(=O)[C@@H](CC(N)=O)NC2=O)NC(=O)[C@@H](Cc2ccc(O)cc2)NC(=O)[C@@H](Cc2c[nH]c3ccccc23)NC(=O)[C@@H](CCCNC(=N)N)NC1=O
C97H139N27O25S4
2211.611000
ZWHDSYOYJKSQRX-RHIJZEKDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436121
Local ready
Direct docking supported
E3L056085
BDB056085
BDBM50436122
CC(C)C[C@@H](NC(=O)[C@H]1CSSC[C@H]2NC(=O)[C@@H](CC(N)=O)NC(=O)[C@H](N)CSSC[C@@H](NC(=O)[C@@H](CC(C)C)NC(=O)[C@@H](Cc3ccccc3)NC(=O)[C@@H]([C@H](C)O)NC(=O)[C@@H](CCC(=O)O)NC(=O)[C@H]3CCCN3C(=O)[C@@H](C)NC(=O)[C@@H](CCCCN)NC2=O)C(=O)N[C@H](Cc2ccc(O)cc2)C(=O)N[C@H](Cc2c[nH]c3ccccc23)C(=O)N[C@H](CCCNC(=N)N)C(=O)N1)C(=O)N[C@H](CCC(N)=O)C(=O)N[C@H](Cc1cnc[nH]1)C(=O)O
C97H139N27O25S4
2211.611000
PETYOLVFAQBBFE-RHIJZEKDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436122
Local ready
Direct docking supported
E3L056086
BDB056086
BDBM50436123
CC(C)C[C@H](NC(=O)[C@@H]1CSSC[C@@H]2NC(=O)[C@H](CC(N)=O)NC(=O)[C@@H](N)CSSC[C@H](NC(=O)[C@H](CC(C)C)NC(=O)[C@H](Cc3ccccc3)NC(=O)[C@H]([C@@H](C)O)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@@H]3CCCN3C(=O)[C@H](C)NC(=O)[C@H](CCCCN)NC2=O)C(=O)N[C@@H](Cc2ccc(O)cc2)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N1)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](Cc1cnc[nH]1)C(=O)O
C97H139N27O25S4
2211.611000
PETYOLVFAQBBFE-QIEFXISYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436123
Local ready
Direct docking supported
E3L056087
BDB056087
BDBM50436444
COc1ccc(COC(=O)N[C@@H](C)C(=O)N[C@@H](CCC(=O)OCc2ccccc2)C(=O)N[C@@H](CC(C)C)C(=O)N[C@H](C(=O)N[C@@H](CC(=O)OC2CCCCCC2)C(=O)N[C@@H](C)C(=O)NN)C(C)C)cc1
C49H72N8O13
981.158000
CDGQGTCAPATJAN-VSMFIGEKSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436444
Local ready
Direct docking supported
E3L056088
BDB056088
Boc-Cys(Npys)-Phe-Ile-Arg(Bes(2,4,6-triMe))-OMe
CC[C@H](C)[C@H](NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CSSc1ncccc1[N+](=O)[O-])NC(=O)OC(C)(C)C)C(=O)N[C@@H](CCCNC(=N)NS(=O)(=O)c1c(C)cc(C)cc1C)C(=O)OC
C44H61N9O11S3
988.225000
CZCUSKVSWXFPBT-NLQTYAGUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50436445; PubChem:CID72714997
Local ready
Direct docking supported
E3L056089
BDB056089
BDBM50436446
COc1ccc(COC(=O)N[C@H](C(=O)N[C@@H](CCC(C)=O)C(=O)N[C@@H](Cc2cn(S(=O)(=O)c3c(C)cc(C)cc3C)c3ccccc23)C(=O)N[C@@H](CC(C)C)C(=O)NN)C(C)C)cc1
C46H61N7O10S
904.100000
UBQPYCBMEQUNOK-UNOODAFMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436446
Local ready
Direct docking supported
E3L056090
BDB056090
BDBM50436681
CC(C)(C)C[C@@H]1N[C@@H](C(=O)N[C@H]2C[C@H](NS(C)(=O)=O)C2)[C@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C28H33Cl2FN4O4S
611.567000
NDYCCWGAHKMHEY-IDOSGCAJSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436681
Local ready
Direct docking supported
E3L056091
BDB056091
BDBM50436682
CC(C)(C)C[C@@H]1N[C@@H](C(=O)N[C@H]2C[C@@](C)(O)C2)[C@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C28H32Cl2FN3O3
548.486000
MZBOZBMARIQZGX-GRRGFIRHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436682
Local ready
Direct docking supported
E3L056092
BDB056092
BDBM50436683
CC(C)(C)C[C@@H]1N[C@@H](C(=O)N[C@H]2C[C@](C)(O)C2)[C@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C28H32Cl2FN3O3
548.486000
MZBOZBMARIQZGX-SRZCFZEISA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436683
Local ready
Direct docking supported
E3L056093
BDB056093
BDBM50436684
CC(C)(C)C[C@@H]1N[C@@H](C(=O)NCC(C)(C)O)[C@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C27H32Cl2FN3O3
536.475000
JRYWEKQNCYQQAJ-NKUCUZEISA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436684
Local ready
Direct docking supported
E3L056094
BDB056094
BDBM50436685
CC(C)(C)C[C@@H]1N[C@@H](C(=O)N[C@H]2CC[C@H](O)C2)[C@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C28H32Cl2FN3O3
548.486000
YPBSIJVXMPPDCG-IDOSGCAJSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436685
Local ready
Direct docking supported
E3L056095
BDB056095
BDBM50436686
CC(C)(C)C[C@@H]1N[C@@H](C(=O)N[C@H]2CC[C@@H](O)C2)[C@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C28H32Cl2FN3O3
548.486000
YPBSIJVXMPPDCG-GPJJJBLTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436686
Local ready
Direct docking supported
E3L056096
BDB056096
BDBM50436687
CC(C)(C)C[C@@H]1N[C@@H](C(=O)N[C@H]2C[C@@H](O)C2)[C@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C27H30Cl2FN3O3
534.459000
NLQIFYWAHULSET-KYVJPXILSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436687
Local ready
Direct docking supported
E3L056097
BDB056097
BDBM50436688
CC(C)(C)C[C@@H]1N[C@@H](C(=O)N[C@H]2C[C@H](O)C2)[C@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C27H30Cl2FN3O3
534.459000
NLQIFYWAHULSET-CIGJFPSUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50436688
Local ready
Direct docking supported
E3L056098
BDB056098
BDBM50436689
CC(C)(C)C[C@@H]1N[C@@H](C(=O)NCC[C@H](O)CO)[C@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C27H32Cl2FN3O4
552.474000
FYHKPZFIVNTTHR-DTAGWJSLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50436689; PubChem:CID69498017
Local ready
Direct docking supported
E3L056099
BDB056099
BDBM50436690
CN(C)CCCOc1ccc(-c2cc3c(NCCc4ccc(NC(=O)Nc5ccccc5)cc4)ncnc3o2)cc1
C32H34N6O3
550.663000
AWSFTVYABIVKMR-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50436690; PubChem:CID57946419
Local ready
Direct docking supported
E3L056100
BDB056100
BDBM50436691
CN(C)CCOc1ccc(-c2cc3c(NCCc4ccc(NC(=O)Nc5ccccc5)cc4)ncnc3o2)cc1
C31H32N6O3
536.636000
GJFJLQXYFZSVOD-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50436691; PubChem:CID44468256
Local ready
Direct docking supported