E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L059021
BDB059021
BDBM50520229
COc1cc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)ccc1NC(=O)c1ccc(-c2ccccc2OC)s1
C29H31FN6O3S
562.671000
XMZAOMNLYKBGRA-HDICACEKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520229; PubChem:CID155537417
Local ready
Direct docking supported
E3L059022
BDB059022
BDBM50520230
COc1cc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)ccc1NC(=O)c1ccc(-c2ccccc2C)s1
C29H31FN6O2S
546.672000
NGMZWDSRIMNTJY-KDURUIRLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520230; PubChem:CID155550965
Local ready
Direct docking supported
E3L059023
BDB059023
BDBM50520231
COc1cc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)ccc1NC(=O)c1ccc(-c2ccoc2)s1
C26H27FN6O3S
522.606000
QAGQPRAGTMJWLG-IYBDPMFKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520231; PubChem:CID155525999
Local ready
Direct docking supported
E3L059024
BDB059024
BDBM50520232
COc1ccc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)cc1Cl
C17H21ClFN5O
365.840000
BPWKTWGLXFWEGW-PHIMTYICSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520232; PubChem:CID155518808
Local ready
Direct docking supported
E3L059025
BDB059025
BDBM50520233
COc1cc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)ccc1NC(=O)c1ccc(Br)o1
C22H24BrFN6O3
519.375000
UGYTUECXXPWXJB-BETUJISGSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520233; PubChem:CID155550865
Local ready
Direct docking supported
E3L059026
BDB059026
Bcl6-IN-6
COc1cc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)ccc1NC(=O)c1ccc(C2=CCCC2)s1
C27H31FN6O2S
522.650000
VJFKSXHAFLCLLP-CALCHBBNSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520234; PubChem:CID155549001
Local ready
Direct docking supported
E3L059027
BDB059027
BDBM50520235
COc1ccc(Nc2nc(N(CC(C)C)CC(C)C)ncc2F)cc1Cl
C19H26ClFN4O
380.895000
DWVCDIMZINSTNN-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520235; PubChem:CID155559510
Local ready
Direct docking supported
E3L059028
BDB059028
BDBM50520236
COc1ccc(Nc2nc(N3C[C@H](C)C[C@H](C)C3)ncc2F)cc1Cl
C18H22ClFN4O
364.852000
FBUAEPXGEQDSDG-TXEJJXNPSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520236; PubChem:CID155561643
Local ready
Direct docking supported
E3L059029
BDB059029
BDBM50520237
COc1ccc(Nc2nc(NC3CCCCC3)ncc2F)cc1Cl
C17H20ClFN4O
350.825000
TWGARLKXIPBSMU-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520237; PubChem:CID155538022
Local ready
Direct docking supported
E3L059030
BDB059030
BDBM50520238
COc1ccc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)cc1NC(=O)c1cccc(Br)n1
C23H25BrFN7O2
530.402000
DZSOMEKOVBRHHK-OKILXGFUSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520238; PubChem:CID155552783
Local ready
Direct docking supported
E3L059031
BDB059031
BDBM50520239
COc1cc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)ccc1NC(=O)c1ccc(Br)s1
C22H24BrFN6O2S
535.443000
GRUSOTNNMOKUDT-BETUJISGSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520239; PubChem:CID155558661
Local ready
Direct docking supported
E3L059032
BDB059032
BDBM50520240
COc1cc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)ccc1NC(=O)c1ccc(C2=CCCCC2)s1
C28H33FN6O2S
536.677000
OHERWAQRPFVCIV-HDICACEKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520240; PubChem:CID155538999
Local ready
Direct docking supported
E3L059033
BDB059033
BDBM50520241
COc1cc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)ccc1NC(=O)c1ccc(-c2ccccc2)s1
C28H29FN6O2S
532.645000
FATUPZVCGKFPAN-HDICACEKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520241; PubChem:CID155528623
Local ready
Direct docking supported
E3L059034
BDB059034
BDBM50520242
COc1ccc(Nc2nc(N3CCOCC3)ncc2F)cc1Cl
C15H16ClFN4O2
338.770000
AVLMMCGZPRSKSO-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520242; PubChem:CID155568277
Local ready
Direct docking supported
E3L059035
BDB059035
BDBM50520243
COc1cc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)ccc1NC(=O)c1ccc(-c2ccccc2Cl)s1
C28H28ClFN6O2S
567.090000
MZTGOVDRMCIBLR-CALCHBBNSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520243; PubChem:CID155525789
Local ready
Direct docking supported
E3L059036
BDB059036
BDBM50520244
COc1ccc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)cc1NC(=O)c1ccc(Br)s1
C22H24BrFN6O2S
535.443000
UXYHJAVVDBPOAQ-BETUJISGSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520244; PubChem:CID155552228
Local ready
Direct docking supported
E3L059037
BDB059037
1-(3-Amino-4-ethoxyphenyl)ethanone
CCOc1ccc(C(C)=O)cc1N
C10H13NO2
179.219000
CBMYGMRLSCLFPD-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM50520333; PubChem:CID17245118
Local ready
Direct docking supported
E3L059038
BDB059038
BDBM50520584
C=CC(=O)Nc1cc(Nc2ncc(F)c(Nc3ccccc3S(=O)(=O)C(C)C)n2)c(OC)cc1N(C)CCN(C)C
C28H36FN7O4S
585.706000
MLXUDJPUEMLBKJ-UHFFFAOYSA-N Q9HC35 ALK tyrosine kinase receptor
BindingDB, PubChem
BindingDB:BDBM50520584; PubChem:CID155519739
Local ready
Direct docking supported
E3L059039
BDB059039
BDBM50520585
C=CC(=O)Nc1cc(Nc2ncc(I)c(Nc3ccccc3P(C)(C)=O)n2)c(OC)cc1N(C)CCN(C)C
C27H35IN7O3P
663.501000
BPGJJKMCXBBEBI-UHFFFAOYSA-N Q9HC35 ALK tyrosine kinase receptor
BindingDB, PubChem
BindingDB:BDBM50520585; PubChem:CID155561359
Local ready
Direct docking supported
E3L059040
BDB059040
BDBM50520586
C=CC(=O)Nc1cc(Nc2ncc(I)c(Nc3ccccc3S(=O)(=O)C(C)C)n2)c(OC)cc1N(C)CCN(C)C
C28H36IN7O4S
693.612000
MFBMGGILJVFTKT-UHFFFAOYSA-N Q9HC35 ALK tyrosine kinase receptor
BindingDB, PubChem
BindingDB:BDBM50520586; PubChem:CID155546345
Local ready
Direct docking supported