E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L059001
BDB059001
BDBM50520138
Cc1cc(CN2CCc3c(cc(Cn4ccn(C)c4=N)cc3-c3ccc(F)cc3C)C2=O)ccc1F
C29H28F2N4O
486.566000
QQLAXBUUMWUFLV-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM50520138; PubChem:CID153572470
Local ready
Direct docking supported
E3L059002
BDB059002
BDBM50520139
COc1cc(CN2CCc3c(cc(CNC(=N)C4CC4)cc3-c3ccc(F)cc3C)C2=O)cc(OC)c1
C30H32FN3O3
501.602000
RYGKJPYPENITQS-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM50520139; PubChem:CID153572609
Local ready
Direct docking supported
E3L059003
BDB059003
BDBM50520140
Cc1cc(CNC(=O)c2cc(Cn3ccn(C)c3=N)cc(-c3ccc(F)cc3C)c2)ccc1Cl
C27H26ClFN4O
476.983000
IARSEIRVTAVNDY-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM50520140; PubChem:CID146456000
Local ready
Direct docking supported
E3L059004
BDB059004
BDBM50520141
COc1cc(CN2CCc3c(cc(Cn4ccoc4=N)cc3-c3ccc(F)cc3C)C2=O)cc(OC)c1
C29H28FN3O4
501.558000
UEMUOVAYMDAREG-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM50520141; PubChem:CID153572353
Local ready
Direct docking supported
E3L059005
BDB059005
BDBM50520213
COc1ccc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)cc1NC(=O)c1ccc(Br)o1
C22H24BrFN6O3
519.375000
QVRUWHCAHGUCFT-BETUJISGSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520213; PubChem:CID155526027
Local ready
Direct docking supported
E3L059006
BDB059006
BDBM50520214
COc1cc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)ccc1NC(=O)c1cc2ccccc2s1
C26H27FN6O2S
506.607000
HITOVNOISXZXSX-IYBDPMFKSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520214; PubChem:CID155559582
Local ready
Direct docking supported
E3L059007
BDB059007
BDBM50520215
COc1ccc(Nc2nc(NCCO)ncc2F)cc1Cl
C13H14ClFN4O2
312.732000
QKNPDVHIBTZQME-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520215; PubChem:CID155518342
Local ready
Direct docking supported
E3L059008
BDB059008
BDBM50520216
CCNc1ncc(F)c(Nc2ccc(OC)c(Cl)c2)n1
C13H14ClFN4O
296.733000
KYSVKAAMGBEYRL-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520216; PubChem:CID80763614
Local ready
Direct docking supported
E3L059009
BDB059009
BDBM50520217
COc1ccc(Nc2nc(NC(C)C)ncc2F)cc1Cl
C14H16ClFN4O
310.760000
GALIUUSSKKYUJO-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520217; PubChem:CID155541010
Local ready
Direct docking supported
E3L059010
BDB059010
BDBM50520218
CCCCNc1ncc(F)c(Nc2ccc(OC)c(Cl)c2)n1
C15H18ClFN4O
324.787000
MIYGPOVDNBVEMG-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520218; PubChem:CID155551469
Local ready
Direct docking supported
E3L059011
BDB059011
BDBM50520219
COc1ccc(Nc2nc(NCCCO)ncc2F)cc1Cl
C14H16ClFN4O2
326.759000
SQJBEAHRTHLBGO-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520219; PubChem:CID155546160
Local ready
Direct docking supported
E3L059012
BDB059012
BDBM50520220
COc1ccc(Nc2nc(NCCCCO)ncc2F)cc1Cl
C15H18ClFN4O2
340.786000
WZWPPFUQJPOXGQ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520220; PubChem:CID155526202
Local ready
Direct docking supported
E3L059013
BDB059013
BDBM50520221
COc1ccc(Nc2nc(N3CCNCC3)ncc2F)cc1Cl
C15H17ClFN5O
337.786000
LDQCIMGGEXGBQQ-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520221; PubChem:CID155545492
Local ready
Direct docking supported
E3L059014
BDB059014
BDBM50520222
COc1ccc(Nc2nc(N3CCN(C)CC3)ncc2F)cc1Cl
C16H19ClFN5O
351.813000
WSYCKEDMFWDJSW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520222; PubChem:CID155524510
Local ready
Direct docking supported
E3L059015
BDB059015
BDBM50520223
COc1ccc(Nc2nc(NC3CCN(C)CC3)ncc2F)cc1Cl
C17H21ClFN5O
365.840000
GAAWBNXNPRJDSW-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520223; PubChem:CID155517294
Local ready
Direct docking supported
E3L059016
BDB059016
BDBM50520224
COc1ccc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)cc1NC(=O)c1cccc(Br)c1
C24H26BrFN6O2
529.414000
COOFOPYBYKSGCV-GASCZTMLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520224; PubChem:CID155549668
Local ready
Direct docking supported
E3L059017
BDB059017
BDBM50520225
COc1ccc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)cc1NC(=O)c1ccccn1
C23H26FN7O2
451.506000
FDQYPLALNFVFBL-GASCZTMLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520225; PubChem:CID155520643
Local ready
Direct docking supported
E3L059018
BDB059018
BDBM50520226
COc1ccc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)cc1NC(=O)c1cccc(F)n1
C23H25F2N7O2
469.496000
UBVGPRNMWQKSJU-OKILXGFUSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520226; PubChem:CID155529082
Local ready
Direct docking supported
E3L059019
BDB059019
BDBM50520227
COc1cc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)ccc1NC(=O)c1cccc(Br)c1
C24H26BrFN6O2
529.414000
UKEFXISLNXNNHR-GASCZTMLSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520227; PubChem:CID155533638
Local ready
Direct docking supported
E3L059020
BDB059020
BDBM50520228
COc1cc(Nc2nc(N3C[C@@H](C)N[C@@H](C)C3)ncc2F)ccc1NC(=O)c1cccc(Br)n1
C23H25BrFN7O2
530.402000
FNTYNMNNLSPEGI-OKILXGFUSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50520228; PubChem:CID155524175
Local ready
Direct docking supported