E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L059101
BDB059101
BDBM50522359
O=C1N(CCO)c2cccc(Cl)c2C12CCN(c1nc3c(c(=O)[nH]1)CCCC3)CC2
C22H25ClN4O3
428.920000
OTGSIWARTZTTNU-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522359; PubChem:CID138594363
Local ready
Direct docking supported
E3L059102
BDB059102
BDBM50522360
O=C1Nc2ccccc2C12CCN(c1nc3c(c(=O)[nH]1)CCCC3)CC2
C20H22N4O2
350.422000
CDZVLUPXXHOPPI-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522360; PubChem:CID138594790
Local ready
Direct docking supported
E3L059103
BDB059103
BDBM50522363
O=c1[nH]c(N2CCC3(CC2)COc2ccccc23)nc2c1CCCC2
C20H23N3O2
337.423000
ZMPMZCQDIANEGC-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522363; PubChem:CID138594436
Local ready
Direct docking supported
E3L059104
BDB059104
BDBM50522364
O=c1[nH]c(N2CCC3(CC2)NCc2ccccc23)nc2c1CCCC2
C20H24N4O
336.439000
SPNJDQXXJCQIMB-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522364; PubChem:CID138595093
Local ready
Direct docking supported
E3L059105
BDB059105
BDBM50522368
COc1ccccc1N1CCCN(c2nc3c(c(=O)[nH]2)CCCC3)CC1
C20H26N4O2
354.454000
BPCSDKZDBQJRAP-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522368; PubChem:CID155562058
Local ready
Direct docking supported
E3L059106
BDB059106
BDBM50522369
O=c1[nH]c(N2CCC3(CC2)CN(CCO)c2cccc(Cl)c23)nc2c1CCCC2
C22H27ClN4O2
414.937000
ZPMJHPPAFDZXFG-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522369; PubChem:CID138594969
Local ready
Direct docking supported
E3L059107
BDB059107
Naphthacemycin B7
COc1cc(O)c(Cl)c(C)c1-c1cc(O)c(Cl)c2cc3c(c(O)c12)C(=O)c1c(O)cc(O)cc1C3(C)C
C28H22Cl2O7
541.383000
OQDPQNIEZGGSQN-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522753; PubChem:CID155539438
Local ready
Direct docking supported
E3L059108
BDB059108
Naphthacemycin B12
COc1cc(O)c(Cl)c(C)c1-c1cc(O)c(Cl)c2cc3c(c(O)c12)C(=O)c1c(O)c(Cl)c(O)c(Cl)c1C3(C)C
C28H20Cl4O7
610.273000
QNNHIHSQZLVNFB-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522754; PubChem:CID155522749
Local ready
Direct docking supported
E3L059109
BDB059109
Naphthacemycin B13
COc1c(Cl)c(O)c(Cl)c(C)c1-c1cc(O)c(Cl)c2cc3c(c(O)c12)C(=O)c1c(O)c(Cl)c(O)c(Cl)c1C3(C)C
C28H19Cl5O7
644.718000
YLKIGAKGYRJIBR-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522755; PubChem:CID155544864
Local ready
Direct docking supported
E3L059110
BDB059110
Naphthacemycin B2
COc1cc(O)cc(C)c1-c1cc(O)cc2cc3c(c(O)c12)C(=O)c1c(O)cc(O)cc1C3(C)C
C28H24O7
472.493000
NMJKMQYYERILCV-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522756; PubChem:CID139589431
Local ready
Direct docking supported
E3L059111
BDB059111
Naphthacemycin B9
COc1cc(O)c(Cl)c(C)c1-c1cc(O)cc2cc3c(c(O)c12)C(=O)c1c(cc(O)c(Cl)c1O)C3(C)C
C28H22Cl2O7
541.383000
QRMNXGRIXZCTSH-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522757; PubChem:CID155526650
Local ready
Direct docking supported
E3L059112
BDB059112
Naphthacemycin B8
COc1cc(O)c(Cl)c(C)c1-c1cc(O)c(Br)c2cc3c(c(O)c12)C(=O)c1c(O)cc(O)cc1C3(C)C
C28H22BrClO7
585.834000
IJROYSZHAIBSKL-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522758; PubChem:CID155536515
Local ready
Direct docking supported
E3L059113
BDB059113
Naphthacemycin B11
COc1cc(O)c(Cl)c(C)c1-c1cc(O)c(Cl)c2cc3c(c(O)c12)C(=O)c1c(cc(O)c(Cl)c1O)C3(C)C
C28H21Cl3O7
575.828000
WZBDIEKMWIHJLF-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522759; PubChem:CID155528679
Local ready
Direct docking supported
E3L059114
BDB059114
Naphthacemycin B6
COc1cc(O)cc(C)c1-c1cc(O)cc2cc3c(c(O)c12)C(=O)c1c(cc(O)c(Cl)c1O)C3(C)C
C28H23ClO7
506.938000
PNVQBZDTHBXLIO-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522760; PubChem:CID155535416
Local ready
Direct docking supported
E3L059115
BDB059115
Naphthacemycin B5
COc1cc(O)c(Cl)c(C)c1-c1cc(O)cc2cc3c(c(O)c12)C(=O)c1c(O)cc(O)cc1C3(C)C
C28H23ClO7
506.938000
GNAKKJPJIZPORK-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522761; PubChem:CID155531235
Local ready
Direct docking supported
E3L059116
BDB059116
Naphthacemycin B10
COc1cc(O)c(Cl)c(C)c1-c1cc(O)cc2cc3c(c(O)c12)C(=O)c1c(O)c(Cl)c(O)c(Cl)c1C3(C)C
C28H21Cl3O7
575.828000
PBPUMYYCMXRCKC-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50522762; PubChem:CID155537679
Local ready
Direct docking supported
E3L059117
BDB059117
BDBM50523629
Cc1cnc2cc(CC[C@H]3C[C@@H](n4ccc5c(N)ncnc54)[C@H](O)[C@@H]3O)c(Cl)cn12
C21H23ClN6O2
426.908000
IXQKPZSMAFSERF-QVSURHGTSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523629; PubChem:CID134416883
Local ready
Direct docking supported
E3L059118
BDB059118
BDBM50523630
Nc1ncnc2c1ccn2[C@@H]1C[C@H](CCc2ccc3cccnc3c2)[C@@H](O)[C@H]1O
C22H23N5O2
389.459000
XINDTHWOOIIELL-OBZTUIKSSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523630; PubChem:CID126638570
Local ready
Direct docking supported
E3L059119
BDB059119
BDBM50523633
Nc1ncnc2c1ccn2[C@@H]1C[C@H](Sc2ccc(Cl)cc2)[C@@H](O)[C@H]1O
C17H17ClN4O2S
376.869000
MHLOCKTYXIORPC-CBBWQLFWSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523633; PubChem:CID135318312
Local ready
Direct docking supported
E3L059120
BDB059120
BDBM50523634
Nc1ncnc2c1ccn2[C@@H]1C[C@H](/C=C/c2ccc3cccnc3c2)[C@@H](O)[C@H]1O
C22H21N5O2
387.443000
XDAKIIHGALSVGF-DEPGCOPASA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523634; PubChem:CID126638569
Local ready
Direct docking supported