E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L059121
BDB059121
BDBM50523635
Nc1ncnc2c1ccn2[C@@H]1O[C@H](COc2ccc3cccnc3c2)[C@@H](O)[C@H]1O
C20H19N5O4
393.403000
CKKMNPIZOMJYSX-WOCWXWTJSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523635; PubChem:CID126638103
Local ready
Direct docking supported
E3L059122
BDB059122
BDBM50523636
Nc1ncnc2c1ccn2[C@@H]1C[C@H]([C@H](O)c2ccc(F)c(F)c2)[C@@H](O)[C@H]1O
C18H18F2N4O3
376.363000
DNDCXYZRSRFLRY-YBUXEROVSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523636; PubChem:CID155175384
Local ready
Direct docking supported
E3L059123
BDB059123
BDBM50523637
C#Cc1nn([C@@H]2O[C@H]([C@H](O)c3ccc(Cl)cc3)[C@@H](O)[C@H]2O)c2ncnc(N)c12
C18H16ClN5O4
401.810000
NIQOIMUVCHGRSS-KQVLKZGSSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523637; PubChem:CID155527085
Local ready
Direct docking supported
E3L059124
BDB059124
BDBM50523639
Nc1ncnc2c1ncn2[C@@H]1O[C@H]([C@H](O)c2ccc(F)c(F)c2)[C@@H](O)[C@H]1O
C16H15F2N5O4
379.323000
LKKYUVKLMITZGD-ZUSNOYAUSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523639; PubChem:CID122482765
Local ready
Direct docking supported
E3L059125
BDB059125
BDBM50523640
Nc1ncnc2c1ccn2[C@@H]1C[C@H](OCc2ccc3cccnc3c2)[C@@H](O)[C@H]1O
C21H21N5O3
391.431000
XXGFRJAJGGZRND-YDZRNGNQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523640; PubChem:CID126637780
Local ready
Direct docking supported
E3L059126
BDB059126
BDBM50523641
Nc1ncnc2c1ccn2[C@@H]1C[C@H](CCc2ccc3ccc(NCC4CC4)nc3c2)[C@@H](O)[C@H]1O
C26H30N6O2
458.566000
HUEIOZOSEXCRNL-DAQNBYSMSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523641; PubChem:CID126638123
Local ready
Direct docking supported
E3L059127
BDB059127
BDBM50523642
Cc1nc2cc(CC[C@H]3C[C@@H](n4ccc5c(N)ncnc54)[C@H](O)[C@@H]3O)ccn2c1C
C22H26N6O2
406.490000
LGQNQLVRFPHNRX-ZSXHRAQDSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523642; PubChem:CID139449442
Local ready
Direct docking supported
E3L059128
BDB059128
BDBM50523643
Nc1cccc(CCCC[C@H]2C[C@@H](n3ccc4c(N)ncnc43)[C@H](O)[C@@H]2O)n1
C20H26N6O2
382.468000
YUKZPONUUIFCET-XFHKCVFHSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523643; PubChem:CID134416650
Local ready
Direct docking supported
E3L059129
BDB059129
BDBM50523644
Nc1ccc(CC[C@H]2C[C@@H](n3ccc4c(N)ncnc43)[C@H](O)[C@@H]2O)cn1
C18H22N6O2
354.414000
CKDKKHTYJFBKPI-ZCDTZLGTSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523644; PubChem:CID134417152
Local ready
Direct docking supported
E3L059130
BDB059130
BDBM50523645
Nc1ncnc2c1ccn2[C@@H]1C[C@H](COc2ccc3cccnc3c2)[C@@H](O)[C@H]1O
C21H21N5O3
391.431000
XWYRTMYZRDLLHB-XEKGUZQTSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523645; PubChem:CID126637557
Local ready
Direct docking supported
E3L059131
BDB059131
BDBM50523646
Nc1ccc2ccc(CC[C@H]3C[C@@H](n4ccc5c(N)ncnc54)[C@H](O)[C@@H]3O)cc2n1
C22H24N6O2
404.474000
IUBFXROFEOCTGQ-GVXRKXQCSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523646; PubChem:CID126638557
Local ready
Direct docking supported
E3L059132
BDB059132
BDBM50523648
C=CC(=O)Nc1ncnc2c1ncn2[C@@H]1O[C@H](CSC)[C@@H](O)[C@H]1O
C14H17N5O4S
351.388000
GRCQBEULNVFWBV-FRJWGUMJSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523648; PubChem:CID132234009
Local ready
Direct docking supported
E3L059133
BDB059133
BDBM50523653
Cc1ncnc2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc(F)c(F)c2)[C@@H](O)[C@H]1O
C18H17F2N3O4
377.347000
UEAAYHPSDGGRQI-ORDFZIBCSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523653; PubChem:CID122482709
Local ready
Direct docking supported
E3L059134
BDB059134
BDBM50523655
Cc1cnc2cc(CC[C@H]3C[C@@H](n4ccc5c(N)ncnc54)[C@H](O)[C@@H]3O)c(F)cn12
C21H23FN6O2
410.453000
DFICHQMERPRTQC-QVSURHGTSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523655; PubChem:CID139449552
Local ready
Direct docking supported
E3L059135
BDB059135
BDBM50523656
Cc1cnc2cc(CC[C@H]3C[C@@H](n4ccc5c(N)ncnc54)[C@H](O)[C@@H]3O)ccn12
C21H24N6O2
392.463000
YPLNCUPFAOBMQF-WLWJZTKJSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523656; PubChem:CID134416983
Local ready
Direct docking supported
E3L059136
BDB059136
BDBM50523659
Cc1ncnc2c1ccn2[C@@H]1O[C@H]([C@H](N)c2ccc(F)c(F)c2)[C@@H](O)[C@H]1O
C18H18F2N4O3
376.363000
CATWWGFETIUKQV-ORDFZIBCSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523659; PubChem:CID122482791
Local ready
Direct docking supported
E3L059137
BDB059137
BDBM50523660
C=C(C)C(=O)Nc1ncnc2c1ncn2[C@@H]1O[C@H](CSC)[C@@H](O)[C@H]1O
C15H19N5O4S
365.415000
BENNKKRCMNOZBG-ORXWAGORSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523660; PubChem:CID132234046
Local ready
Direct docking supported
E3L059138
BDB059138
BDBM50523662
C#Cc1cn([C@@H]2O[C@H]([C@H](O)c3ccc(Cl)cc3)[C@@H](O)[C@H]2O)c2ncnc(N)c12
C19H17ClN4O4
400.822000
NJWHFGKLLBVQAN-PPLBCVRQSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523662; PubChem:CID155531170
Local ready
Direct docking supported
E3L059139
BDB059139
US11220524, Example 20
N/N=c1\nc[nH]c2c1ccn2[C@@H]1O[C@H]([C@H](O)c2ccc(Cl)cc2)[C@@H](O)[C@H]1O
C17H18ClN5O4
391.815000
XOAGRGZQXSOUHH-QFRSUPTLSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50523663; PubChem:CID154029228
Local ready
Direct docking supported
E3L059140
BDB059140
BDBM50523701
O=C(C1=CC[C@@H](c2ccc(Br)cc2)[C@@]2(S1)C(=O)Nc1ccccc12)c1ccccc1
C25H18BrNO2S
476.395000
CRFIMGYHOAFGBA-DFBJGRDBSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50523701; PubChem:CID155544506
Local ready
Direct docking supported