E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L059201
BDB059201
BDBM50525346
C#CCSc1nc(Sc2nnc(N)s2)c(C#N)c(-c2cc(OC)c(OC)c(OC)c2)n1
C19H16N6O3S3
472.577000
WJSSCBOCLYZOAS-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50525346; PubChem:CID155551673
Local ready
Direct docking supported
E3L059202
BDB059202
BDBM50525347
C#CCSc1nc(Sc2nc(C)cs2)c(C#N)c(-c2cc(OC)c(OC)c(OC)c2)n1
C21H18N4O3S3
470.601000
VNEWXPWHIORCIM-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50525347; PubChem:CID155534850
Local ready
Direct docking supported
E3L059203
BDB059203
BDBM50525348
C#CCSc1nc(Sc2nc3ccccc3s2)c(C#N)c(-c2cc(OC)c(OC)c(OC)c2)n1
C24H18N4O3S3
506.634000
XHBZXWWYILGQRT-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50525348; PubChem:CID155546159
Local ready
Direct docking supported
E3L059204
BDB059204
BDBM50525349
C#CCSc1nc(Sc2nccs2)c(C#N)c(-c2ccc[nH]2)n1
C15H9N5S3
355.473000
WWCCGKKTOBFZIJ-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50525349; PubChem:CID155566347
Local ready
Direct docking supported
E3L059205
BDB059205
BDBM50525350
C#CCSc1nc(Sc2nnnn2CCN(C)C)c(C#N)c(-c2ccc(Cl)cc2)n1
C19H17ClN8S2
456.988000
WSVQEZQRWDGIQG-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50525350; PubChem:CID155516077
Local ready
Direct docking supported
E3L059206
BDB059206
BDBM50525351
CCCSc1nc(Sc2nccs2)c(C#N)c(-c2ccc(Cl)cc2)n1
C17H13ClN4S3
404.973000
VIMZKBPZLGUURM-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50525351; PubChem:CID155527341
Local ready
Direct docking supported
E3L059207
BDB059207
BDBM50525352
C#CCSc1nc(Sc2nnnn2C)c(C#N)c(-c2cccs2)n1
C14H9N7S3
371.476000
ISAIPOHALNOQES-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50525352; PubChem:CID155531749
Local ready
Direct docking supported
E3L059208
BDB059208
BDBM50525353
C#CCSc1nc(-c2cc(OC)c(OC)c(OC)c2)c(C#N)c(N2CCCCC2)n1
C22H24N4O3S
424.526000
JTXNQGFYWXLMLJ-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50525353; PubChem:CID155529696
Local ready
Direct docking supported
E3L059209
BDB059209
Propionamidopropanamide
CCC(=O)N[C@@H](Cc1nc2ccc(C(C)C)cc2s1)C(=O)N[C@H](CNC(=O)CCN1CCOCC1)C1CCCCC1
C31H47N5O4S
585.815000
CNJKDQGPBAWNRY-IZZNHLLZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50525354; PubChem:CID131750123
Local ready
Direct docking supported
E3L059210
BDB059210
BDBM50525572
Cc1ccccc1/N=N/c1ccc(NC(=O)c2ccnn2C)c(C)c1
C19H19N5O
333.395000
LKTNEXPODAWWFM-GHVJWSGMSA-N P35869 Aryl hydrocarbon receptor
BindingDB
BindingDB:BDBM50525572
Local ready
Direct docking supported
E3L059211
BDB059211
BDBM50525763
COC(=O)Nc1ccc2c(c1)NC(=O)CC/C=C/C[C@H](N1CC[C@H](c3cccc(Cl)c3)CC1=O)c1nc-2c[nH]1
C29H30ClN5O4
548.043000
YMEHWISYYMKMFO-WOMRJYOTSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM50525763; PubChem:CID139592452
Local ready
Direct docking supported
E3L059212
BDB059212
BDBM50525764
COC(=O)Nc1ccc2c(c1)NC(=O)CC/C=C/C[C@H](N1CC[C@H](c3cccc(Cl)c3)OC1=O)c1nc-2c[nH]1
C28H28ClN5O5
550.015000
ZRELHZVMHRERCT-KXHVVKIWSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM50525764; PubChem:CID71260387
Local ready
Direct docking supported
E3L059213
BDB059213
BDBM50525783
CCOc1cc(/C=C2\S/C(=N/c3ccc(Cl)c(C(=O)O)c3)N(C)C2=O)cc(Cl)c1O
C20H16Cl2N2O5S
467.330000
FGKGEXXAYGBGKQ-WPCGGMMTSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB
BindingDB:BDBM50525783
Local ready
Direct docking supported
E3L059214
BDB059214
Deferiprone
Cc1c(O)c(=O)ccn1C
C7H9NO2
139.154000
TZXKOCQBRNJULO-UHFFFAOYSA-N P41229, Q8NHM5 Lysine-specific demethylase 2B, Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50525976; PubChem:CID2972
Local ready
Direct docking supported
E3L059215
BDB059215
3-(2-Morpholin-4-ylanilino)piperidine-2,6-dione
O=C1CCC(Nc2ccccc2N2CCOCC2)C(=O)N1
C15H19N3O3
289.335000
WBYAHIPMCICAIV-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1, Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50526581; PubChem:CID146573403
Local ready
Direct docking supported
E3L059216
BDB059216
BDBM50526788
CC(C)c1cnn2c(NCc3ccccc3)cc(NC[C@]3(O)CCNC[C@H]3O)nc12
C22H30N6O2
410.522000
OVDMCYNLHNMECD-XMSQKQJNSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50526788; PubChem:CID118329742
Local ready
Direct docking supported
E3L059217
BDB059217
BDBM50526789
CC(C)c1cnn2c(NCc3ccccc3)cc(NC[C@@H]3CCNC[C@H]3O)nc12
C22H30N6O
394.523000
YCVGLKWJKIKVBI-PKOBYXMFSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50526789; PubChem:CID137349544
Local ready
Direct docking supported
E3L059218
BDB059218
BDBM50526794
CN(C)C/C=C/C(=O)Nc1cccc(C(=O)Nc2cccc(Nc3ncc(Cl)c(-c4c[nH]c5ccccc45)n3)c2)c1
C31H28ClN7O2
566.065000
FONRCZUZCHXWBD-VGOFMYFVSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50526794; PubChem:CID78357763
Local ready
Direct docking supported
E3L059219
BDB059219
Ykl-5-124
C=CC(=O)Nc1ccc(C(=O)Nc2[nH]nc3c2CN(C(=O)N[C@H](CN(C)C)c2ccccc2)C3(C)C)cc1
C28H33N7O3
515.618000
KPABJHHKKJIDGX-JOCHJYFZSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50526795; PubChem:CID121443990
Local ready
Direct docking supported
E3L059220
BDB059220
BDBM50526796
CC(C)c1cnn2c(NCc3ccccc3)cc(NC[C@H]3CCCC[C@@H]3O)nc12
C23H31N5O
393.535000
FEWLFECITKFLDY-QUCCMNQESA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50526796; PubChem:CID118329760
Local ready
Direct docking supported