E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L059881
BDB059881
BDBM50539908
C=CC(=O)Nc1ccc(C(=O)N2CC(Nc3ncc(SCc4ncc(C(C)(C)C)o4)s3)CC(F)(F)C2)cc1
C26H29F2N5O3S2
561.680000
GAQVCXTZOSXWPY-UHFFFAOYSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539908; PubChem:CID145749962
Local ready
Direct docking supported
E3L059882
BDB059882
BDBM50539909
C=CC(=O)Nc1ccc(C(=O)N2C[C@H](Nc3ncc(SCc4ncc(C(C)(C)C)o4)s3)CC[C@@H]2C)cc1
C27H33N5O3S2
539.727000
FPBKUBUKBWJEMH-FXAWDEMLSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539909; PubChem:CID145749937
Local ready
Direct docking supported
E3L059883
BDB059883
BDBM50539910
C=CC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3ncc(SCc4ncc(C(C)(C)C)o4)s3)C2)nc1
C25H30N6O3S2
526.688000
UVGATDDZBKJSAL-QGZVFWFLSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539910; PubChem:CID137358275
Local ready
Direct docking supported
E3L059884
BDB059884
BDBM50539911
C=CC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3ncc(SCc4ncc(C(C)(C)C)o4)s3)C2)cc1F
C26H30FN5O3S2
543.690000
APFZUNBSYNZMFG-QGZVFWFLSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539911; PubChem:CID146646573
Local ready
Direct docking supported
E3L059885
BDB059885
BDBM50539912
C=CC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3ncc(SCc4ncc(C(C)(C)C)o4)s3)C2)cc1C(F)(F)F
C27H30F3N5O3S2
593.697000
SCNMJGFMXAIFOK-QGZVFWFLSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539912; PubChem:CID156011018
Local ready
Direct docking supported
E3L059886
BDB059886
BDBM50539913
C=CC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3ncc(SCc4ccncc4)s3)C2)cc1
C24H25N5O2S2
479.631000
CYUGBWPMMZVPDP-HXUWFJFHSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539913; PubChem:CID137358290
Local ready
Direct docking supported
E3L059887
BDB059887
BDBM50539914
C=CC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3ncc(SCc4cnc(C(F)(F)F)nc4)s3)C2)cc1
C24H23F3N6O2S2
548.616000
QNQVGWPXBWZBQX-GOSISDBHSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539914; PubChem:CID137358263
Local ready
Direct docking supported
E3L059888
BDB059888
BDBM50539915
C=CC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3ncc(SCC4CCOCC4)s3)C2)cc1
C24H30N4O3S2
486.663000
XPTUNGFRXJHQJG-HXUWFJFHSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539915; PubChem:CID145749966
Local ready
Direct docking supported
E3L059889
BDB059889
BDBM50539916
C=CC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3ncc(CCc4ncc(C(C)(C)C)o4)s3)C2)cc1
C27H33N5O3S
507.660000
NXZXWOASWYOLBZ-HXUWFJFHSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539916; PubChem:CID126673128
Local ready
Direct docking supported
E3L059890
BDB059890
BDBM50539917
C=CC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3ncc(COCc4ncc(C(C)(C)C)o4)s3)C2)cc1
C27H33N5O4S
523.659000
YPSQOIGPBAPUFM-HXUWFJFHSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539917; PubChem:CID145749947
Local ready
Direct docking supported
E3L059891
BDB059891
BDBM50539918
C=CC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3ncc(CNCc4ncc(C(C)(C)C)o4)s3)C2)cc1
C27H34N6O3S
522.675000
BULBBWSMORELAY-HXUWFJFHSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539918; PubChem:CID145749889
Local ready
Direct docking supported
E3L059892
BDB059892
BDBM50539919
C=CC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3ncc([S+]([O-])Cc4ncc(C(C)(C)C)o4)s3)C2)cc1
C26H31N5O4S2
541.699000
CCGRMLGTKGCLKM-DEQHTHAUSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539919; PubChem:CID137358369
Local ready
Direct docking supported
E3L059893
BDB059893
BDBM50539920
C=CC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3ncc(Cl)c(SCc4ncc(C(C)(C)C)o4)n3)C2)cc1
C27H31ClN6O3S
555.104000
PUZGAVMGSWIMSU-LJQANCHMSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539920; PubChem:CID156019445
Local ready
Direct docking supported
E3L059894
BDB059894
BDBM50539921
C=CC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3nnc(SCc4ncc(C(C)(C)C)o4)s3)C2)cc1
C25H30N6O3S2
526.688000
ZGTBRXCHDKWPQT-GOSISDBHSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539921; PubChem:CID145749881
Local ready
Direct docking supported
E3L059895
BDB059895
BDBM50539922
C=CC(=O)Nc1ccc(C(=O)N2CCC[C@@H](Nc3nc(C)c(SCc4ncc(C(C)(C)C)o4)s3)C2)cc1
C27H33N5O3S2
539.727000
LXESGOTXIVUNEN-HXUWFJFHSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50539922; PubChem:CID137358102
Local ready
Direct docking supported
E3L059896
BDB059896
BDBM50539994
CCOC(=O)c1ncn2c(NCc3ccco3)ncc(-c3ccccc3)c12
C20H18N4O3
362.389000
DFMJIOMYNHXBIT-UHFFFAOYSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM50539994; PubChem:CID155580134
Local ready
Direct docking supported
E3L059897
BDB059897
BDBM50539995
CNC(=O)c1ncn2c(NCc3ccco3)ncc(-c3ccccc3)c12
C19H17N5O2
347.378000
FCPVLGPNZXJDIA-UHFFFAOYSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM50539995; PubChem:CID155580118
Local ready
Direct docking supported
E3L059898
BDB059898
BDBM50539996
CCOC(=O)c1ncn2c(NCc3ccccc3)ncc(-c3ccccc3)c12
C22H20N4O2
372.428000
MSPQIWFVLKTMSY-UHFFFAOYSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM50539996; PubChem:CID156014520
Local ready
Direct docking supported
E3L059899
BDB059899
BDBM50539997
CCOC(=O)c1ncn2c(NCc3ccccc3OC)ncc(-c3ccccc3)c12
C23H22N4O3
402.454000
MYFASGJBSVCXHC-UHFFFAOYSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM50539997; PubChem:CID155580189
Local ready
Direct docking supported
E3L059900
BDB059900
BDBM50539998
CCOC(=O)c1ncn2c(NCc3c(F)cccc3OC)ncc(-c3ccccc3)c12
C23H21FN4O3
420.444000
LNTAFVKHGSPPGY-UHFFFAOYSA-N O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM50539998; PubChem:CID155580138
Local ready
Direct docking supported