E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L060001
BDB060001
BDBM50542055
Cn1cc(-c2ccc(NC(=O)[C@H](NCCc3ccc(C#N)cc3)c3ccccc3)nc2)cn1
C26H24N6O
436.519000
ZJGMOHOOSGHFMJ-RUZDIDTESA-N Q09472, Q92793 Histone acetyltransferase p300, CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM50542055; PubChem:CID146014966
Local ready
Direct docking supported
E3L060002
BDB060002
BDBM50542056
Cn1cc(-c2ccc(NC(=O)[C@H](NCCc3ccc(C#N)cc3)c3ccccc3)cn2)cn1
C26H24N6O
436.519000
FWUKETSVGXRKEY-RUZDIDTESA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50542056; PubChem:CID156013603
Local ready
Direct docking supported
E3L060003
BDB060003
BDBM50542057
Cn1cc(-c2cnc(NC(=O)[C@H](NCCc3ccc(C#N)cc3)c3ccccc3)cn2)cn1
C25H23N7O
437.507000
BNJIGTSAPAJMFC-XMMPIXPASA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50542057; PubChem:CID156013232
Local ready
Direct docking supported
E3L060004
BDB060004
BDBM50542058
Cn1cc(-c2ccc(NC(=O)[C@H](NCCc3ccc(C#N)cc3)c3ccccc3)nn2)cn1
C25H23N7O
437.507000
CDYZSDIRBQXFGC-XMMPIXPASA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50542058; PubChem:CID156017058
Local ready
Direct docking supported
E3L060005
BDB060005
BDBM50542059
Cn1cc(-c2ncc(NC(=O)[C@H](NCCc3ccc(C#N)cc3)c3ccccc3)cn2)cn1
C25H23N7O
437.507000
SHAJSBACPAWTQT-HSZRJFAPSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50542059; PubChem:CID156020071
Local ready
Direct docking supported
E3L060006
BDB060006
BDBM50542060
C[C@H](CN[C@@H](C(=O)Nc1ccc(-c2cnn(C)c2)cn1)c1ccccc1)c1ccc(C#N)cc1
C27H26N6O
450.546000
SEDFZSHSBUXKAC-NIYFSFCBSA-N Q09472, Q92793 Histone acetyltransferase p300, CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM50542060; PubChem:CID146014965
Local ready
Direct docking supported
E3L060007
BDB060007
BDBM50542268
CN[C@@H](C)C(=O)NC1C(=O)N(Cc2c(OC)ccc3cc(Br)ccc23)c2ccccc2CC12CCOCC2
C30H34BrN3O4
580.523000
WEUSBBSVDABQAW-JDEXWRGDSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50542268; PubChem:CID156014703
Local ready
Direct docking supported
E3L060008
BDB060008
BDBM50542269
CN[C@@H](C)C(=O)NC1C(=O)N(Cc2c(C#N)n(-c3ccccc3C#N)c3ccccc23)c2ccccc2CC12CCOCC2
C35H34N6O3
586.696000
RHHHIZVXCBEMRY-SZGIACGNSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50542269; PubChem:CID156009481
Local ready
Direct docking supported
E3L060009
BDB060009
BDBM50542270
CC(C)(C)C[C@@H]1N[C@@H](C(=O)NCCN2CCOCC2)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(Cl)ccc12
C29H35Cl2FN4O3
577.528000
YTBYOWZWBDYLQF-ILRKGFAZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50542270; PubChem:CID156018933
Local ready
Direct docking supported
E3L060010
BDB060010
BDBM50542271
CC(C)(C)C[C@@H]1N[C@@H](C(=O)N[C@H]2CC[C@H](O)CC2)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(Cl)ccc12
C29H34Cl2FN3O3
562.513000
IDKAKZRYYDCJDU-LWBDNYSYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50542271
Local ready
Direct docking supported
E3L060011
BDB060011
BDBM50542272
Cc1cc(CC(=O)N2C[C@H](O)C[C@H]2C(=O)NCc2ccccc2Cl)on1
C18H20ClN3O4
377.828000
UGZKBQSCCGQTLZ-CJNGLKHVSA-N P40337 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM50542272; PubChem:CID57382178
Local ready
Direct docking supported
E3L060012
BDB060012
BDBM50542273
O=C(O)[C@H]1CCC[C@H]1C(=O)N1CCc2ccccc2[C@H]1CN1C(=O)c2ccccc2C1=O
C25H24N2O5
432.476000
VLYHLCQLLVPWJM-QHAWAJNXSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB, PubChem
BindingDB:BDBM50542273; PubChem:CID145958345
Local ready
Direct docking supported
E3L060013
BDB060013
BDBM50542274
O=C(O)[C@H]1CCCC[C@H]1C(=O)N1CCc2ccccc2[C@H]1CN1C(=O)CCC1=O
C22H26N2O5
398.459000
IOTCJAZBVIBCPM-FGTMMUONSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB, PubChem
BindingDB:BDBM50542274; PubChem:CID145960115
Local ready
Direct docking supported
E3L060014
BDB060014
Dyrk1A-IN-3
Cc1cccc(N(C)c2nccc(-c3cnn4ncccc34)n2)c1
C18H16N6
316.368000
XOBINHQHMGZFDI-UHFFFAOYSA-N Q92630 Dual specificity tyrosine-phosphorylation-regulated kinase 2
BindingDB, PubChem
BindingDB:BDBM50543394; PubChem:CID156011155
Local ready
Direct docking supported
E3L060015
BDB060015
BDBM50543445
COc1cccc([C@@]2(C34CC5CC(CC(C5)C3)C4)N=C(N)N(C)C2=O)c1
C21H27N3O2
353.466000
NTEXGYXPUMXCQI-GEYGSZSDSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50543445; PubChem:CID156021569
Local ready
Direct docking supported
E3L060016
BDB060016
BDBM50543446
CN1C(=O)[C@](c2ccccc2)(C23CC4CC(CC(C4)C2)C3)N=C1N
C20H25N3O
323.440000
BEDDENNXVBITIQ-IJWPFNNMSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50543446; PubChem:CID156014167
Local ready
Direct docking supported
E3L060017
BDB060017
BDBM50543447
CN1C(=O)[C@](c2ccc3ccccc3c2)(C23CC4CC(CC(C4)C2)C3)N=C1N
C24H27N3O
373.500000
PEZCYCNZDMTLLQ-JJHVHIABSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50543447; PubChem:CID156017325
Local ready
Direct docking supported
E3L060018
BDB060018
BDBM50543448
COc1ccc(C2(C34CC5CC(O)(CC(F)(C5)C3)C4)N=C(N)N(C)C2=O)cc1
C21H26FN3O3
387.455000
ZTMMGDFSHICYDN-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50543448; PubChem:CID156021628
Local ready
Direct docking supported
E3L060019
BDB060019
BDBM50543449
COc1ccc([C@@]2(C34CC5CC(CC(O)(C5)C3)C4)N=C(N)N(C)C2=O)cc1
C21H27N3O3
369.465000
NYXCEDBEACLWMP-SCJBTZFISA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50543449; PubChem:CID156017469
Local ready
Direct docking supported
E3L060020
BDB060020
BDBM50543450
COc1ccc(C2(C34CCC(CC3)CC4)N=C(N)N(C)C2=O)cc1
C19H25N3O2
327.428000
XHLBXTMTHYPYNB-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50543450; PubChem:CID156011432
Local ready
Direct docking supported