E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L061541
BDB061541
Ac(1)-Tyr-Leu-Arg-Phe-Arg-Cys(1)-NH2
CC(C)C[C@@H]1NC(=O)[C@H](Cc2ccc(O)cc2)NC(=O)CSC[C@@H](C(N)=O)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CCCNC(=N)N)NC1=O
C41H61N13O8S
896.089000
COZAYPVEKRMKBT-JNRWAQIZSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM50583875; PubChem:CID166628930
Local ready
Direct docking supported
E3L061542
BDB061542
Ac(1)-D-Tyr-D-Leu-D-Arg-Phe-Thr-Leu-Cys(1)-NH2
CC(C)C[C@@H]1NC(=O)[C@H]([C@@H](C)O)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CC(C)C)NC(=O)[C@@H](Cc2ccc(O)cc2)NC(=O)CSC[C@@H](C(N)=O)NC1=O
C45H67N11O10S
954.165000
KYBRJYBMHDPXEW-FRIDQADUSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM50583876; PubChem:CID166628037
Local ready
Direct docking supported
E3L061543
BDB061543
Xmu-MP-1
CN1C(=O)c2sccc2N(C)c2nc(Nc3ccc(S(N)(=O)=O)cc3)ncc21
C17H16N6O3S2
416.488000
YRDHKIFCGOZTGD-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50583996; PubChem:CID121499143
Local ready
Direct docking supported
E3L061544
BDB061544
BDBM50584134
CCCSc1nc(Sc2nccs2)c(C#N)c(-c2cc(OC)c(OC)c(OC)c2)n1
C20H20N4O3S3
460.606000
VAHSQUDVWHPKAL-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584134; PubChem:CID166632686
Local ready
Direct docking supported
E3L061545
BDB061545
BDBM50584135
C=CCSc1nc(Sc2nccs2)c(C#N)c(-c2cc(OC)c(OC)c(OC)c2)n1
C20H18N4O3S3
458.590000
KQMGFWDVHOLYJN-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584135; PubChem:CID166632203
Local ready
Direct docking supported
E3L061546
BDB061546
BDBM50584136
COc1cc(-c2nc(SCC3CCCCC3)nc(Sc3nccs3)c2C#N)cc(OC)c1OC
C24H26N4O3S3
514.698000
MPBXPZHWLJAEQA-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584136; PubChem:CID166633933
Local ready
Direct docking supported
E3L061547
BDB061547
BDBM50584137
COc1cc(-c2nc(SCc3ccccc3)nc(Sc3nccs3)c2C#N)cc(OC)c1OC
C24H20N4O3S3
508.650000
ORWPAMLRFHZVKN-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584137; PubChem:CID166627291
Local ready
Direct docking supported
E3L061548
BDB061548
BDBM50584138
COc1cc(-c2nc(SCc3ccncc3)nc(Sc3nccs3)c2C#N)cc(OC)c1OC
C23H19N5O3S3
509.638000
DFJPNZXZAWZJQR-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584138; PubChem:CID166632039
Local ready
Direct docking supported
E3L061549
BDB061549
BDBM50584139
COc1cc(-c2nc(SCc3ccoc3C(F)(F)F)nc(Sc3nccs3)c2C#N)cc(OC)c1OC
C23H17F3N4O4S3
566.608000
IVLAFVQSGCKUOL-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584139; PubChem:CID166635871
Local ready
Direct docking supported
E3L061550
BDB061550
BDBM50584140
COc1cc(-c2nc(SCc3nc4ccccc4[nH]3)nc(Sc3nccs3)c2C#N)cc(OC)c1OC
C25H20N6O3S3
548.675000
APIWHNODJXQXDU-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584140; PubChem:CID166627998
Local ready
Direct docking supported
E3L061551
BDB061551
BDBM50584141
COc1cc(-c2nc(SCc3c(C)noc3C)nc(Sc3nccs3)c2C#N)cc(OC)c1OC
C23H21N5O4S3
527.653000
LOJWLDSZVBUUFP-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584141; PubChem:CID166633228
Local ready
Direct docking supported
E3L061552
BDB061552
BDBM50584142
COc1cc(-c2nc(SCCc3ccccc3)nc(Sc3nccs3)c2C#N)cc(OC)c1OC
C25H22N4O3S3
522.677000
VSTABZRMZSRHTO-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584142; PubChem:CID166627471
Local ready
Direct docking supported
E3L061553
BDB061553
BDBM50584143
COc1cc(-c2nc(SCC(=O)Nc3ccccc3)nc(Sc3nccs3)c2C#N)cc(OC)c1OC
C25H21N5O4S3
551.675000
UFWOIYSVUCDACE-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584143; PubChem:CID166629757
Local ready
Direct docking supported
E3L061554
BDB061554
BDBM50584144
COc1cc(-c2nc(SCC(=O)NC(=O)Nc3ccccc3)nc(Sc3nccs3)c2C#N)cc(OC)c1OC
C26H22N6O5S3
594.700000
GRGSWPPCXIQBLX-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584144; PubChem:CID166631899
Local ready
Direct docking supported
E3L061555
BDB061555
BDBM50584145
COc1cc(-c2nc(SCc3ccccc3)nc(Sc3nnnn3C)c2C#N)cc(OC)c1OC
C23H21N7O3S2
507.601000
WMVLYUNNEMHXRY-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584145; PubChem:CID166627756
Local ready
Direct docking supported
E3L061556
BDB061556
BDBM50584146
COc1cc(-c2nc(SCc3ccccc3)nc(Sc3nnnn3CCN(C)C)c2C#N)cc(OC)c1OC
C26H28N8O3S2
564.697000
FWMNXMOHYXQHEY-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584146; PubChem:CID166633272
Local ready
Direct docking supported
E3L061557
BDB061557
BDBM50584147
COc1cc(-c2nc(SCc3ccccc3)nc(Sc3nc(C)cs3)c2C#N)cc(OC)c1OC
C25H22N4O3S3
522.677000
SKBDPTXFCQDLCJ-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584147; PubChem:CID166628025
Local ready
Direct docking supported
E3L061558
BDB061558
BDBM50584148
COc1cc(-c2nc(SCc3ccccc3)nc(Sc3nc(C)c(C)s3)c2C#N)cc(OC)c1OC
C26H24N4O3S3
536.704000
GVYFPDYOXAOGQW-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584148; PubChem:CID166626986
Local ready
Direct docking supported
E3L061559
BDB061559
BDBM50584149
COc1cc(-c2nc(SCc3ccccc3)nc(NCc3nccs3)c2C#N)cc(OC)c1OC
C25H23N5O3S2
505.625000
DMYYEOYFYJGEBO-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584149; PubChem:CID166636580
Local ready
Direct docking supported
E3L061560
BDB061560
BDBM50584150
COc1cc(-c2nc(SCc3ccccc3)nc(Nc3ccc(Cl)cc3)c2C#N)cc(OC)c1OC
C27H23ClN4O3S
519.026000
CVWZMDWFJXCQAG-UHFFFAOYSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM50584150; PubChem:CID145958937
Local ready
Direct docking supported