E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L061701
BDB061701
BDBM50585775
CN1CCC([C@@](C)(O)c2ccc3cnc(Nc4cc(N5CCCC5)ncc4F)cc3n2)CC1
C25H31FN6O
450.562000
HUNWQLBOLVYRMW-RUZDIDTESA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50585775; PubChem:CID166631779
Local ready
Direct docking supported
E3L061702
BDB061702
BDBM50585776
CC(C)Nc1cc(Nc2cc3nc([C@](C)(O)C4CCN(C)CC4)ccc3cn2)c(F)cn1
C24H31FN6O
438.551000
UZQXPHDZFUAMQS-XMMPIXPASA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50585776; PubChem:CID166627570
Local ready
Direct docking supported
E3L061703
BDB061703
BDBM50585777
CC(C)Oc1cc(Nc2cc3nc([C@](C)(O)C4CCN(C)CC4)ccc3cn2)c(F)cn1
C24H30FN5O2
439.535000
WLPDYLPFPWPYBC-XMMPIXPASA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50585777; PubChem:CID166630123
Local ready
Direct docking supported
E3L061704
BDB061704
BDBM50585778
CN1CCC([C@@](C)(O)c2ccc3cnc(Nc4cc(OC5CCC5)ncc4F)cc3n2)CC1
C25H30FN5O2
451.546000
CLCKDDAPJRHFEN-RUZDIDTESA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50585778; PubChem:CID166634189
Local ready
Direct docking supported
E3L061705
BDB061705
BDBM50585779
CCc1cc(Nc2cc3nc([C@](C)(O)C4CCN(C)CC4)ccc3cn2)c(F)cn1
C23H28FN5O
409.509000
QXVWBJROURLRIW-HSZRJFAPSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50585779; PubChem:CID166632020
Local ready
Direct docking supported
E3L061706
BDB061706
BDBM50585780
CC(C)c1cc(Nc2cc3nc([C@](C)(O)C4CCN(C)CC4)ccc3cn2)c(F)cn1
C24H30FN5O
423.536000
HRKCERYJQXATNH-XMMPIXPASA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50585780; PubChem:CID166632368
Local ready
Direct docking supported
E3L061707
BDB061707
BDBM50585781
CN1CCC([C@@](C)(O)c2ccc3cnc(Nc4cc(C(F)(F)F)ncc4F)cc3n2)CC1
C22H23F4N5O
449.452000
GHNYLVIESIGHDJ-OAQYLSRUSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50585781; PubChem:CID162439673
Local ready
Direct docking supported
E3L061708
BDB061708
BDBM50585782
CC(C)c1cc(Nc2cc3nc([C@](C)(O)C4CCN(C)CC4)ccc3cn2)c(F)cc1C#N
C26H30FN5O
447.558000
MOXBYMQBYZTOJA-AREMUKBSSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50585782; PubChem:CID166629073
Local ready
Direct docking supported
E3L061709
BDB061709
BDBM50585783
CC(C)Oc1cc(Nc2cc3nc([C@](C)(O)C4CCN(C)CC4)ccc3cn2)c(F)cc1C#N
C26H30FN5O2
463.557000
QRPJDQZOXSLSEK-AREMUKBSSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50585783; PubChem:CID166625236
Local ready
Direct docking supported
E3L061710
BDB061710
BDBM50585784
CN1CCC([C@@](C)(O)c2ccc3cnc(Nc4cc(C(F)(F)F)c(C#N)cc4F)cc3n2)CC1
C24H23F4N5O
473.474000
WIQLQHJLURUMAP-HSZRJFAPSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50585784; PubChem:CID166632292
Local ready
Direct docking supported
E3L061711
BDB061711
BDBM50585785
CN1CCC([C@@](C)(O)c2ccc3cnc(Nc4cc(N5CC6CCC(C5)O6)c(C#N)cc4F)cc3n2)CC1
C29H33FN6O2
516.621000
PHVGAEJTLZFYTO-UQIPPQJZSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50585785; PubChem:CID166625947
Local ready
Direct docking supported
E3L061712
BDB061712
BDBM50585786
CN1CCC([C@@](C)(O)c2ccc3cnc(Nc4cc(C(N)=O)ncc4F)cc3n2)CC1
C22H25FN6O2
424.480000
DDPAPPCCQQJSAP-JOCHJYFZSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50585786; PubChem:CID166629991
Local ready
Direct docking supported
E3L061713
BDB061713
BDBM50586176
CCS(=O)(=O)N1CC(CC#N)(n2cc(-c3nc(Nc4ccc(C(=O)NCCCCNc5cccc6c5C(=O)N(C5CCC(=O)NC5=O)C6=O)cc4)nc4[nH]ccc34)cn2)C1
C40H40N12O7S
832.904000
XTSGMNYQSRAKGD-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50586176
Local ready
Direct docking supported
E3L061714
BDB061714
BDBM50586177
CCS(=O)(=O)N1CC(CC#N)(n2cc(-c3nc(Nc4ccc(C(=O)NCCCCOc5cccc6c5C(=O)N(C5CCC(=O)NC5=O)C6=O)cc4)nc4[nH]ccc34)cn2)C1
C40H39N11O8S
833.888000
RHRPJQJOBDOJKU-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50586177
Local ready
Direct docking supported
E3L061715
BDB061715
BDBM50586178
CCS(=O)(=O)N1CC(CC#N)(n2cc(-c3nc(Nc4ccc(C(=O)NC5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)cc4)nc4[nH]ccc34)cn2)C1
C41H40N12O7S
844.915000
QENXNFNQQOSOIZ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50586178
Local ready
Direct docking supported
E3L061716
BDB061716
BDBM50586179
CCS(=O)(=O)N1CC(CC#N)(n2cc(-c3nc(Nc4ccc(C(=O)NCCN5CCN(c6ccc7c(c6)C(=O)N(C6CCC(=O)NC6=O)C7=O)CC5)cc4)nc4[nH]ccc34)cn2)C1
C42H43N13O7S
873.957000
PURCRNBCKBOXFH-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50586179
Local ready
Direct docking supported
E3L061717
BDB061717
BDBM50586180
CCS(=O)(=O)N1CC(CC#N)(n2cc(-c3nc(Nc4ccc(C(=O)NCCCCNc5cccc(C6CCC(=O)NC6=O)c5)cc4)nc4[nH]ccc34)cn2)C1
C38H41N11O5S
763.885000
YMDKCHNRIDZCIK-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50586180
Local ready
Direct docking supported
E3L061718
BDB061718
BDBM50586181
CCS(=O)(=O)N1CC(CC#N)(n2cc(-c3nc(Nc4ccc(C(=O)NCCCCOc5ccc(C6CCC(=O)NC6=O)cc5)cc4)nc4[nH]ccc34)cn2)C1
C38H40N10O6S
764.869000
JQXUGPKGNONGRJ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50586181
Local ready
Direct docking supported
E3L061719
BDB061719
BDBM50586182
CCS(=O)(=O)N1CC(CC#N)(n2cc(-c3nc(Nc4ccc(C(=O)NCCCCOc5cccc(C6CCC(=O)NC6=O)c5)cc4)nc4[nH]ccc34)cn2)C1
C38H40N10O6S
764.869000
CXJYSNHTGSVIBV-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50586182
Local ready
Direct docking supported
E3L061720
BDB061720
BDBM50586183
CCS(=O)(=O)N1CC(CC#N)(n2cc(-c3nc(Nc4ccc(C(=O)NC5CCN(c6ccc(C7CCC(=O)NC7=O)cc6)CC5)cc4)nc4[nH]ccc34)cn2)C1
C39H41N11O5S
775.896000
XKYDUBODDYBCNZ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB
BindingDB:BDBM50586183
Local ready
Direct docking supported