E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L062801
BDB062801
BDBM50606367
COc1ccc(S(=O)(=O)N(CC(N)=O)c2ccc(N(CC(N)=O)S(=O)(=O)c3ccc(NC(=O)CCCN4CCOCC4)cc3)c3ccccc23)cc1
C35H40N6O9S2
752.872000
VHBXLRBGNUUXHI-UHFFFAOYSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB, PubChem
BindingDB:BDBM50606367; PubChem:CID168296346
Local ready
Direct docking supported
E3L062802
BDB062802
BDBM50606368
CCN1CCN(CCCC(=O)Nc2ccc(S(=O)(=O)N(CC(N)=O)c3ccc(N(CC(N)=O)S(=O)(=O)c4ccc(OC)cc4)c4ccccc34)cc2)CC1
C37H45N7O8S2
779.942000
XGGQQFHSICPQPI-UHFFFAOYSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB, PubChem
BindingDB:BDBM50606368; PubChem:CID168284692
Local ready
Direct docking supported
E3L062803
BDB062803
BDBM50606369
COc1ccc(S(=O)(=O)N(CC(N)=O)c2ccc(N(CC(N)=O)S(=O)(=O)c3ccc(NC(=O)CCCN4CCN(C(C)C)CC4)cc3)c3ccccc23)cc1
C38H47N7O8S2
793.969000
FMPHKXBTBLUHGX-UHFFFAOYSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB, PubChem
BindingDB:BDBM50606369; PubChem:CID168269692
Local ready
Direct docking supported
E3L062804
BDB062804
BDBM50606587
Cc1ccc(NC(=O)Cn2cc(CN(C(=O)CCC(=O)OC(C)(C)C)C(C(=O)NC3CCCCC3)c3c[nH]c4cc(Cl)ccc34)nn2)c(C)c1
C37H46ClN7O5
704.272000
BDBJRQVRBCTOEL-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50606587; PubChem:CID168298856
Local ready
Direct docking supported
E3L062805
BDB062805
BDBM50606589
COC(=O)C1CC2CSCN2C12C(=O)Nc1ccc(NCc3ccc([N+](=O)[O-])cc3OCC(=O)O)cc12
C24H24N4O8S
528.543000
JPJKFRDTRPWLGR-UHFFFAOYSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50606589; PubChem:CID168299808
Local ready
Direct docking supported
E3L062806
BDB062806
BDBM50606699
CO[C@@H]1C[C@H](C[C@@H](C)[C@@H]2CC(=O)[C@H](C)/C=C(\C)[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)/C=C/C=C/C=C(\C)[C@@H](OCCOCCO)C[C@@H]3CC[C@@H](C)[C@@](O)(O3)C(=O)C(=O)N3CCCC[C@H]3C(=O)O2)CC[C@H]1O
C54H85NO15
988.266000
SZLDHHYNQHTTRI-UNASQXLBSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB
BindingDB:BDBM50606699
Local ready
Direct docking supported
E3L062807
BDB062807
BDBM50606700
CO[C@@H]1C[C@H](C[C@@H](C)[C@@H]2CC(=O)[C@H](C)/C=C(\C)[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)/C=C/C=C/C=C(\C)[C@@H](OCCOCCOCCO)C[C@@H]3CC[C@@H](C)[C@@](O)(O3)C(=O)C(=O)N3CCCC[C@H]3C(=O)O2)CC[C@H]1O
C56H89NO16
1032.319000
SUJIALJWEKSGPM-SJLQVODTSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB
BindingDB:BDBM50606700
Local ready
Direct docking supported
E3L062808
BDB062808
BDBM50606701
CO[C@@H]1C[C@H](C[C@@H](C)[C@@H]2CC(=O)[C@H](C)/C=C(\C)[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)/C=C/C=C/C=C(\C)[C@@H](OCCSCCSCCO)C[C@@H]3CC[C@@H](C)[C@@](O)(O3)C(=O)C(=O)N3CCCC[C@H]3C(=O)O2)CC[C@H]1O
C56H89NO14S2
1064.455000
FFLDLTVATCIHHJ-SJLQVODTSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB
BindingDB:BDBM50606701
Local ready
Direct docking supported
E3L062809
BDB062809
BDBM50606702
CO[C@@H]1C[C@H](C[C@@H](C)[C@@H]2CC(=O)[C@H](C)/C=C(\C)[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)/C=C/C=C/C=C(\C)[C@@H](OCCOCCOCCOCCOCCOCCOCCOCCO)C[C@@H]3CC[C@@H](C)[C@@](O)(O3)C(=O)C(=O)N3CCCC[C@H]3C(=O)O2)CC[C@H]1O
C66H109NO21
1252.584000
FGLBYLXBDSWYMS-ZUEOZOSKSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB
BindingDB:BDBM50606702
Local ready
Direct docking supported
E3L062810
BDB062810
BDBM50606703
CO[C@@H]1C[C@H](C[C@@H](C)[C@@H]2CC(=O)[C@H](C)/C=C(\C)[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)/C=C/C=C/C=C(\C)[C@@H](OCC3COCCOCCOCCO3)C[C@@H]3CC[C@@H](C)[C@@](O)(O3)C(=O)C(=O)N3CCCC[C@H]3C(=O)O2)CC[C@H]1O
C59H93NO17
1088.383000
NCAZCDLIVOSTMU-GLWXMXPSSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB
BindingDB:BDBM50606703
Local ready
Direct docking supported
E3L062811
BDB062811
BDBM50606704
CC1(C)COCCN1c1nc(-c2cnc(N)cc2C(F)F)nc(N2CCOCC2)n1
C19H25F2N7O2
421.452000
CSLVGODBTQVCKU-UHFFFAOYSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM50606704; PubChem:CID121334513
Local ready
Direct docking supported
E3L062812
BDB062812
BDBM50606705
CC1(C)COCCN1c1nc(-c2cnc(N)cc2C(F)F)nc(N2CCOCC2(C)C)n1
C21H29F2N7O2
449.506000
BFWNUTHNJXXPSV-UHFFFAOYSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM50606705; PubChem:CID121334416
Local ready
Direct docking supported
E3L062813
BDB062813
BDBM50606706
Nc1ncc(-c2nc(N3C4CCC3COC4)nc(N3C4COCC3COC4)n2)c(C(F)F)n1
C20H24F2N8O3
462.461000
TXZDQMGQQGAAGN-UHFFFAOYSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM50606706; PubChem:CID168299694
Local ready
Direct docking supported
E3L062814
BDB062814
BDBM50606707
CO[C@@H]1C[C@H](C[C@@H](C)[C@@H]2CC(=O)[C@H](C)/C=C(\C)[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)/C=C/C=C/C=C(\C)C(OCCO)C[C@@H]3CC[C@@H](C)[C@@](O)(O3)C(=O)C(=O)N3CCCC[C@H]3C(=O)O2)CC[C@H]1OC(=O)NCCc1ccccc1
C61H90N2O15
1091.390000
QCTFVKSUOJNDIU-PKWAGSGHSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB
BindingDB:BDBM50606707
Local ready
Direct docking supported
E3L062815
BDB062815
BDBM50606708
CO[C@@H]1C[C@H](C[C@@H](C)[C@@H]2CC(=O)[C@H](C)/C=C(\C)[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)/C=C/C=C/C=C(\C)C(OCCO)C[C@@H]3CC[C@@H](C)[C@@](O)(O3)C(=O)C(=O)N3CCCC[C@H]3C(=O)O2)CC[C@H]1OCCCN1CCOC[C@H]1C
C60H96N2O15
1085.427000
MHUXWVXSHPKHOH-ZEMJUZMISA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB
BindingDB:BDBM50606708
Local ready
Direct docking supported
E3L062816
BDB062816
BDBM50606709
CO[C@@H]1C[C@H](C[C@@H](C)[C@@H]2CC(=O)[C@H](C)/C=C(\C)[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)/C=C/C=C/C=C(\C)C(OCCO)C[C@@H]3CC[C@@H](C)[C@@](O)(O3)C(=O)C(=O)N3CCCC[C@H]3C(=O)O2)CC[C@H]1OCCCN1CCOC[C@@H]1C
C60H96N2O15
1085.427000
MHUXWVXSHPKHOH-UMFRNSKPSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB
BindingDB:BDBM50606709
Local ready
Direct docking supported
E3L062817
BDB062817
BDBM50606710
CO[C@@H]1C[C@H](C[C@@H](C)[C@@H]2CC(=O)[C@H](C)/C=C(\C)[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)/C=C/C=C/C=C(\C)C(OCCO)C[C@@H]3CC[C@@H](C)[C@@](O)(O3)C(=O)C(=O)N3CCCC[C@H]3C(=O)O2)CC[C@H]1OCCCN1CCOC(C)(C)C1
C61H98N2O15
1099.454000
UTHMBBRRISIROG-WGKWZLCJSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB
BindingDB:BDBM50606710
Local ready
Direct docking supported
E3L062818
BDB062818
BDBM50606711
CO[C@@H]1C[C@H](C[C@@H](C)[C@@H]2CC(=O)[C@H](C)/C=C(\C)[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)/C=C/C=C/C=C(\C)C(OCCO)C[C@@H]3CC[C@@H](C)[C@@](O)(O3)C(=O)C(=O)N3CCCC[C@H]3C(=O)O2)CC[C@H]1OCCCN1C[C@@H](C)O[C@@H](C)C1
C61H98N2O15
1099.454000
CRYXPWDLRGLZDJ-HBKVEUHOSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB
BindingDB:BDBM50606711
Local ready
Direct docking supported
E3L062819
BDB062819
BDBM50606717
CO[C@@H]1C[C@@H]2CC[C@@H](C)[C@@](O)(O2)C(=O)C(=O)N2CCCC[C@H]2C(=O)OC([C@H](C)C[C@@H]2C[C@@H]3C[C@H]2C[C@H]3O)CC(=O)[C@H](C)/C=C(\C)[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)/C=C/C=C/C=C/1C
C51H77NO12
896.172000
PWOJHTAZPQKPPN-MCVDMIQGSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB
BindingDB:BDBM50606717
Local ready
Direct docking supported
E3L062820
BDB062820
US11518767, Example 1-2
CC(C)CC1(C)CN(c2ccc3oc(N)nc3c2)c2c(N)ncnc21
C18H22N6O
338.415000
JGRISWOXHZGZPV-UHFFFAOYSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM50606733; PubChem:CID142608599
Local ready
Direct docking supported