E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L065509
LIG000079
MG-276
O=C1CCC(N2Cc3c(CCCCNC(=O)[C@@H]4NC5(CCCCC5)[C@@]5(C(=O)Nc6cc(Cl)ccc65)[C@H]4c4cccc(Cl)c4F)cccc3C2=O)C(=O)N1
C40H40Cl2FN5O5
760.694000
BARRRGHJVPGEOB-AKXSFRSWSA-N - -
MolGlueDB
MolGlueDB:MGDB1122
Local ready
Direct docking supported
E3L065510
LIG000080
7
CCC(O)CSc1nc(NCc2ccc(-n3cccn3)cc2)c2[nH]nc(C(C)C)c2n1
C22H27N7OS
437.573000
BBEBFVIINBDLJM-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB431
Local ready
Direct docking supported
E3L065511
LIG000081
15b
C[C@@H]1CCCN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC(F)(F)[C@@H](C4CC4)N3)n2)C1
C26H29ClF2N6O2
531.007000
BBIACINZYUBHFF-JLCFBVMHSA-N - -
MolGlueDB
MolGlueDB:MGDB13
Related BindingDB:BDBM50606296; Related BindingDB:BDBM50606297
Local ready
Direct docking supported
E3L065512
LIG000082
15a
C[C@H]1CCCN(c2ncc(Cl)c(Nc3ccc4c(c3)c3c(c(=O)n4C)OCC(F)(F)[C@@H](C4CC4)N3)n2)C1
C26H29ClF2N6O2
531.007000
BBIACINZYUBHFF-RCDICMHDSA-N - -
MolGlueDB
MolGlueDB:MGDB27
Local ready
Direct docking supported
E3L065513
LIG000083
ZXH-1-144
CN(c1ccccc1)c1nccc(NCC(=O)Nc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)n1
C26H25N7O4
499.531000
BBLBXFIBZWEJOP-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50541819; MolGlueDB:MGDB514
Local ready
Direct docking supported
E3L065514
LIG000084
dALK-12
Cc1cc(Nc2ncc(Cl)c(Nc3ccccc3S(=O)(=O)C(C)C)n2)c(OC(C)C)cc1C1CCN(CCC(=O)N2CC3(C2)CN(c2cc4c(cc2F)C(=O)N(C2CCC(=O)NC2=O)C4=O)C3)CC1
C49H55ClFN9O8S
984.552000
BBNLUESPXORUPM-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB277
Local ready
Direct docking supported
E3L065515
LIG000085
6g
O=Cc1ccc(OCC#Cc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)cc1
C23H18N2O5
402.406000
BCKPZOUNJAIYGM-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1370
Local ready
Direct docking supported
E3L065516
LIG000086
LC-04-045
O=C1CC[C@H](N2Cc3cc(-c4cnc5n4CCN(Cc4ccccc4-c4ccccc4Cl)C5)ccc3C2=O)C(=O)N1
C32H28ClN5O3
566.061000
BCMOPTSSSQMZDU-MHZLTWQESA-N - -
MolGlueDB
MolGlueDB:MGDB1270
Local ready
Direct docking supported
E3L065517
LIG000087
13
O=C1CCC(N2Cc3cc(CNC(=O)Nc4ccc(Cl)cc4)ccc3C2=O)C(=O)N1
C21H19ClN4O4
426.860000
BCTZVDWPHVNFTR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1187
Local ready
Direct docking supported
E3L065518
LIG000088
Nutlin-3B
COc1ccc(C2=N[C@H](c3ccc(Cl)cc3)[C@H](c3ccc(Cl)cc3)N2C(=O)N2CCNC(=O)C2)c(OC(C)C)c1
C30H30Cl2N4O4
581.500000
BDUHCSBCVGXTJM-IZLXSDGUSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, e3_ligand
BindingDB:BDBM50392532; e3_ligand:37
Local ready
Direct docking supported
E3L065519
LIG000089
Nutlin-3
COc1ccc(C2=NC(c3ccc(Cl)cc3)C(c3ccc(Cl)cc3)N2C(=O)N2CCNC(=O)C2)c(OC(C)C)c1
C30H30Cl2N4O4
581.500000
BDUHCSBCVGXTJM-UHFFFAOYSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, e3_ligand
BindingDB:BDBM31197; e3_ligand:9
Local ready
Direct docking supported
E3L065520
LIG000090
Nutlin-3A
COc1ccc(C2=N[C@@H](c3ccc(Cl)cc3)[C@@H](c3ccc(Cl)cc3)N2C(=O)N2CCNC(=O)C2)c(OC(C)C)c1
C30H30Cl2N4O4
581.500000
BDUHCSBCVGXTJM-WUFINQPMSA-N O15151, Q00987 E3 ubiquitin-protein ligase Mdm2, Protein Mdm4
BindingDB, e3_ligand
BindingDB:BDBM50229787; e3_ligand:46
Local ready
Direct docking supported
E3L065521
LIG000091
LIG000091
O=C(CCl)NC(C(=O)NCc1ccccc1)c1nc2ccccc2s1
C18H16ClN3O2S
373.865000
BDYFRJSOVNEEQZ-UHFFFAOYSA-N - -
e3_ligand
e3_ligand:83
Local ready
Direct docking supported
E3L065522
LIG000092
Compound 10
O=C1CCC(N2Cc3cc(-c4nc5ccccn5c4NC45CC6CC(CC(C6)C4)C5)ccc3C2=O)C(=O)N1
C30H31N5O3
509.610000
BDZWATYRORWZMU-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1164
Local ready
Direct docking supported
E3L065523
LIG000093
8
O=C1CCC(N2Cc3c(ccc4c3OCC43CCN(Cc4ccccc4)C3)C2=O)C(=O)N1
C25H25N3O4
431.492000
BEOFMHXYIMYEEF-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1459
Local ready
Direct docking supported
E3L065524
LIG000094
LIG000094
O=C1CCC(N2C(=O)c3cccc4cccc(c34)C2=O)C(=O)N1
C17H12N2O4
308.293000
BERVIROBWDIAQO-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, e3_ligand
BindingDB:BDBM684557; e3_ligand:60
Local ready
Direct docking supported
E3L065525
LIG000095
compound 7
COc1cccnc1-c1cn(C2CCC(=O)NC2=O)nn1
C13H13N5O3
287.279000
BFDHHUBLUTWSOQ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB719
Local ready
Direct docking supported
E3L065526
LIG000096
C2
CCOC(=O)C1CCCN(C(=O)c2nn(-c3ccc(C)c(C)c3)c(=O)n(C)c2=O)C1
C21H26N4O5
414.462000
BFKCLCIMQUSXAR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1432
Local ready
Direct docking supported
E3L065527
LIG000097
10
COc1n[nH]c2c(CN3CCCC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc12
C25H26N6O4
474.521000
BFUJTJQIZGRPQG-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, MolGlueDB
BindingDB:BDBM756008; MolGlueDB:MGDB1501
Local ready
Direct docking supported
E3L065528
LIG000098
NRX-103095
CN(C)C(=O)c1cccc(NC(=O)c2c(Sc3c(Cl)cccc3Cl)cc(C(F)(F)F)[nH]c2=O)c1
C22H16Cl2F3N3O3S
530.355000
BGEHEUAOZPAMKC-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB506
Local ready
Direct docking supported