E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L066270
LIG000840
6-NH2-EM12
Nc1ccc2c(c1)C(=O)N(C1CCC(=O)NC1=O)C2
C13H13N3O3
259.265000
LAGNQECGHYBSCQ-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1, Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50614101; MolGlueDB:MGDB811
Local ready
Direct docking supported
E3L066271
LIG000841
KMG-1068
COC(=O)c1nc(NC(=O)Cn2cnc(C)c(C)c2=O)sc1CCc1ccccc1
C21H22N4O4S
426.498000
LAQHQKJOQQJGCZ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1471
Local ready
Direct docking supported
E3L066272
LIG000842
16
Nc1n[nH]c2c(CN3CCC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc12
C23H23N7O3
445.483000
LAXPQGCLPHSTCP-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, MolGlueDB
BindingDB:BDBM755956; MolGlueDB:MGDB1507
Local ready
Direct docking supported
E3L066273
LIG000843
cmp28
O=C1CCC(N2Cc3c(OCc4ccc(CN5CCN(c6ccc(Cl)cc6Cl)CC5=O)cc4)cccc3C2=O)C(=O)N1
C31H28Cl2N4O5
607.494000
LBCBAPLWMOHXCR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1106
Local ready
Direct docking supported
E3L066274
LIG000844
L1
CCOC(=O)c1nn(-c2ccc(C)c(C)c2)c(=O)n(Cc2ccccc2)c1=O
C21H21N3O4
379.416000
LBDZZMPCOVHMCL-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB487
Local ready
Direct docking supported
E3L066275
LIG000845
ZXH-1-179
COc1cc(F)ccc1C1N=CC=C(NCC(=O)Nc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)N1
C26H25FN6O5
520.521000
LBGXVDNBTCIXBY-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB616
Local ready
Direct docking supported
E3L066276
LIG000846
cmp7c
O=C1CC(NC(=O)c2c(Cl)cc(Cl)cc2Cl)C(=O)N1
C11H7Cl3N2O3
321.547000
LBWIBZYKUVIBKH-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB906
Local ready
Direct docking supported
E3L066277
LIG000847
UOM-005839
CN(CCOCCOCCN)c1ccc(CC(=O)Nc2nnc(SCc3cccnc3)s2)cc1
C23H30N6O3S2
502.666000
LCLLMUQLYXIOMU-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1484
Local ready
Direct docking supported
E3L066278
LIG000848
LCL161 derivative
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CCC[C@H]1c1nc(C(=O)c2cccc(OC)c2)cs1)C1CCCCC1
C27H36N4O4S
512.676000
LCQFGFLQFLFDST-RTFZILSDSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2
BindingDB, e3_ligand
BindingDB:BDBM50279272; e3_ligand:48
Local ready
Direct docking supported
E3L066279
LIG000849
LCL161 derivative
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CCC[C@H]1c1nc(C(=O)c2cccc(OC)c2)cs1)C1CCCCC1
C27H36N4O4S
512.676000
LCQFGFLQFLFDST-RTFZILSDSA-N P98170 -
e3_ligand
e3_ligand:48
Local ready
Direct docking supported
E3L066280
LIG000850
LCL161 derivative
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CCC[C@H]1c1nc(C(=O)c2cccc(OC)c2)cs1)C1CCCCC1
C27H36N4O4S
512.676000
LCQFGFLQFLFDST-RTFZILSDSA-N Q13489 -
e3_ligand
e3_ligand:48
Local ready
Direct docking supported
E3L066281
LIG000851
S656
CN(C)c1ccc(CC(=O)Nc2ncc(SCc3cccnc3)s2)cc1
C19H20N4OS2
384.530000
LDDFEYPHVJLXIL-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1481
Local ready
Direct docking supported
E3L066282
LIG000852
30
Cn1nc(N2CCC(=O)NC2=O)c2ccccc21
C12H12N4O2
244.254000
LEODGVRUTOHQBX-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB593
Local ready
Direct docking supported
E3L066283
LIG000853
cmpd 13
Cc1cccc(S(=O)(=O)Nc2nccc(Nc3cccc4c3C(=O)N(C3CCC(=O)NC3=O)C4=O)n2)c1
C24H20N6O6S
520.527000
LEPFEJPCVARHRW-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB380
Local ready
Direct docking supported
E3L066284
LIG000854
14b
O=C1CCC(CSc2ccc(Cl)cc2)C(=O)N1
C12H12ClNO2S
269.753000
LESSZBSLYSHLDN-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50625120; MolGlueDB:MGDB936
Local ready
Direct docking supported
E3L066285
LIG000855
UOM-005608
O=C(Cc1ccc(N2CCCC2)cc1)Nc1ncc(SCc2cccnc2)s1
C21H22N4OS2
410.568000
LFVLSZPWZWLJLJ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1485
Local ready
Direct docking supported
E3L066286
LIG000856
39
CCCCOc1ccc2cc(C(=O)Nc3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)ccc2c1
C28H27N3O5
485.540000
LGICWZWRXNEGBB-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB453
Local ready
Direct docking supported
E3L066287
LIG000857
compound 12
O=C1CCC(n2cc(Cc3ccccc3)nn2)C(=O)N1
C14H14N4O2
270.292000
LGMIEVUZNUSRRZ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1051
Local ready
Direct docking supported
E3L066288
LIG000858
HQ020
O=C(Cc1csc(Nc2ccccn2)n1)NCc1nc2ccccc2[nH]1
C18H16N6OS
364.434000
LGZNPORGMNLKSJ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB860
Local ready
Direct docking supported
E3L066289
LIG000859
LYG-416
COc1cccc2c1OCC(C(=O)NCc1ccc3c(c1)CN(C1CCC(=O)NC1=O)C3=O)=C2
C25H23N3O6
461.474000
LHSVRMCMURJDQT-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1359
Local ready
Direct docking supported