E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L066402
LIG000972
DS33
CC[C@H](CO)Nc1nc(NCCCC2CCCC2)c2ncn(C(C)C)c2n1
C20H34N6O
374.533000
MUUYNLRINFEBRS-MRXNPFEDSA-N - -
MolGlueDB
MolGlueDB:MGDB1590
Local ready
Direct docking supported
E3L066403
LIG000973
14c
Cc1ccc(SCC2CCC(=O)NC2=O)cc1
C13H15NO2S
249.335000
MVIKRIPLXUENOJ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50625121; MolGlueDB:MGDB367
Local ready
Direct docking supported
E3L066404
LIG000974
EM12-SO2Im(4-CF3)
O=C1CCC(N2Cc3ccc(S(=O)(=O)n4cnc(C(F)(F)F)c4)cc3C2=O)C(=O)N1
C17H13F3N4O5S
442.375000
MWGZKBUCRJPIJF-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50630774; MolGlueDB:MGDB1252
Local ready
Direct docking supported
E3L066405
LIG000975
11
O=C1CCC(N2C(=O)c3ccc(Br)cc3C2=O)C(=O)N1
C13H9BrN2O4
337.129000
MWMSBQXTHIEBNT-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, MolGlueDB
BindingDB:BDBM511675; MolGlueDB:MGDB994
Local ready
Direct docking supported
E3L066406
LIG000976
deoxyuridine
O=c1ccn([C@H]2CC(O)[C@@H](CO)O2)c(=O)[nH]1
C9H12N2O5
228.204000
MXHRCPNRJAMMIM-KYVYOHOSSA-N - -
MolGlueDB
MolGlueDB:MGDB1394
Related BindingDB:BDBM777383
Local ready
Direct docking supported
E3L066407
LIG000977
MGD-4
CN1Cc2c(N)cccc2C(=O)N1C1CCC(=O)NC1=O
C14H16N4O3
288.307000
MXJNMZBXMSTPNN-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB564
Local ready
Direct docking supported
E3L066408
LIG000978
20
O=C1CCC(n2ncc3ccccc32)C(=O)N1
C12H11N3O2
229.239000
MXJZNPWGQKNANB-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, MolGlueDB
BindingDB:BDBM50631128; MolGlueDB:MGDB631
Local ready
Direct docking supported
E3L066409
LIG000979
ZXH-1-125
O=C1CCC(N2Cc3c(NC(=O)CNc4ccnc(-c5ccc(F)cc5)n4)cccc3C2=O)C(=O)N1
C25H21FN6O4
488.479000
MXLILKZJDYJUPW-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM585783; MolGlueDB:MGDB1130
Local ready
Direct docking supported
E3L066410
LIG000980
15
Nc1n[nH]c2c(CN3CCC(F)CC3)cc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc12
C25H26FN7O3
491.527000
MXZUZNYXSXERNT-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, MolGlueDB
BindingDB:BDBM755964; MolGlueDB:MGDB1506
Local ready
Direct docking supported
E3L066411
LIG000981
Entry 16
CN1CCN([C@@H]2CCCN(c3cnc(C(N)=O)c(Nc4ccc(N5CCN(C[C@@H]6[C@H]7CN(c8ccc9c(c8)C(=O)N(C8CCC(=O)NC8=O)C9=O)C[C@@H]67)CC5)cc4)n3)C2)C1=O
C43H50N12O6
830.951000
MYKZGDSGPTZTPG-BZALUWLJSA-N - -
MolGlueDB
MolGlueDB:MGDB574
Local ready
Direct docking supported
E3L066412
LIG000982
10
CN(C(=O)c1ccccc1)c1ccc2c(c1)CN(C1CCC(=O)NC1=O)C2=O
C21H19N3O4
377.400000
MYMJVTWBKDUFPG-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB505
Local ready
Direct docking supported
E3L066413
LIG000983
12
O=C1CCC(N2C(=O)c3ccc([N+](=O)[O-])cc3C2=O)C(=O)N1
C13H9N3O6
303.230000
MYPNWKPZEHVONN-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, MolGlueDB
BindingDB:BDBM50516598; MolGlueDB:MGDB946
Local ready
Direct docking supported
E3L066415
LIG000985
13
CC[C@H](CO)Nc1nc(NCc2ccc(-c3cc(F)ccn3)cc2)c2ncn(C(C)C)c2n1
C24H28FN7O
449.534000
MYZMHESPSYDNQL-LJQANCHMSA-N - -
MolGlueDB
MolGlueDB:MGDB199
Local ready
Direct docking supported
E3L066416
LIG000986
9c
CC(=O)c1ccc(-c2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)cc1
C21H18N2O4
362.385000
MZTKHYCDFQGJHX-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1377
Local ready
Direct docking supported
E3L066417
LIG000987
cmp25
CC1(C)CCN(Cc2ccc(COc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)cc2)CC1
C28H33N3O4
475.589000
NAGCAYVXXNJTIS-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB231
Local ready
Direct docking supported
E3L066418
LIG000988
iDeg-3 CRL2KLHDC3
CCc1ccc(NC(=O)OC[C@]23CN(S(=O)(=O)c4ccc(C(C)(C)C)cc4)C[C@H]2C[C@H]2C[C@@H]3C2(C)C)cc1
C31H42N2O4S
538.754000
NAJMPBYCLGQZBT-GGWKSQAJSA-N - -
MolGlueDB
MolGlueDB:MGDB434
Local ready
Direct docking supported
E3L066419
LIG000989
J4
Cc1ccc(-n2nc(C(=O)O)c(=O)n(Cc3ccccc3)c2=O)cc1C
C19H17N3O4
351.362000
NANSUZIWPUDSRP-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB330
Local ready
Direct docking supported
E3L066420
LIG000990
AN5676
Cc1nc2c(C)cccc2cc1C(=O)N/N=C/c1cccnc1
C18H16N4O
304.353000
NATSJEDPNROWRU-RGVLZGJSSA-N - -
MolGlueDB
MolGlueDB:MGDB411
Local ready
Direct docking supported
E3L066421
LIG000991
I5
Cc1ccc(-n2nc(C#N)c(=O)n(C)c2=O)cc1C
C13H12N4O2
256.265000
NBWYKDHVPQBXEU-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB237
Local ready
Direct docking supported
E3L066422
LIG000992
SJPYT-226
COc1ccc(OC)c(-n2nnc(C(=O)Nc3cc(OCC(=O)Nc4cccc5c4C(=O)N(C4CCC(=O)NC4=O)C5=O)cc(C(C)(C)C)c3)c2C)c1
C37H37N7O9
723.743000
NBZSKEJRYGBSLV-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB691
Local ready
Direct docking supported